RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, human

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-206	ENST00000487602	RPL37AP8	A6NKH3	93 aa		5.02	□□□□□ -1.61
RBM28-206	ENST00000487602	SMIM11B	Q8TCY0	68 aa		5.02	□□□□□ -1.61
RBM28-206	ENST00000487602	KRTAP4-6	Q9BYQ5	205 aa		5.02	□□□□□ -1.61
RBM28-206	ENST00000487602	CBY1	Q9Y3M2	126 aa		5.02	□□□□□ -1.61
RBM28-206	ENST00000487602	PKHD1	P08F94	4074 aa		5.02	□□□□□ -1.61
RBM28-206	ENST00000487602	TRAV23DV6	A0A075B6W5	121 aa		5.01	□□□□□ -1.61
RBM28-206	ENST00000487602		H3BUT2	72 aa		5.01	□□□□□ -1.61
RBM28-206	ENST00000487602	PSMB2	P49721	201 aa		5.01	□□□□□ -1.61
RBM28-206	ENST00000487602	CIRBP-AS1	Q8TBR5	109 aa		5.01	□□□□□ -1.61
RBM28-206	ENST00000487602	NAA38	Q9BRA0	125 aa	Known RBP	5.01	□□□□□ -1.61
RBM28-206	ENST00000487602	PRY	O14603	147 aa		5	□□□□□ -1.61
RBM28-206	ENST00000487602	UBE2B	P63146	152 aa		5	□□□□□ -1.61
RBM28-206	ENST00000487602	SCX	Q7RTU7	201 aa		5	□□□□□ -1.61
RBM28-206	ENST00000487602	TRIAP1	O43715	76 aa		4.99	□□□□□ -1.61
RBM28-206	ENST00000487602	ZNF73	O43830	326 aa	Predicted RBP	4.99	□□□□□ -1.61
RBM28-206	ENST00000487602	COX6C	P09669	75 aa		4.99	□□□□□ -1.61
RBM28-206	ENST00000487602	SCGB1C2	P0DMR2	95 aa		4.99	□□□□□ -1.61
RBM28-206	ENST00000487602	C6orf99	Q4VX62	202 aa		4.99	□□□□□ -1.61
RBM28-206	ENST00000487602	KRTAP11-1	Q8IUC1	163 aa		4.99	□□□□□ -1.61
RBM28-206	ENST00000487602	DIRC1	Q969H9	104 aa		4.99	□□□□□ -1.61
RBM28-206	ENST00000487602	TRBV7-6	A0A0J9YX20	115 aa		4.98	□□□□□ -1.61
RBM28-206	ENST00000487602		A0A1W2PPM0	123 aa		4.98	□□□□□ -1.61
RBM28-206	ENST00000487602		H0YGX0	51 aa		4.98	□□□□□ -1.61
RBM28-206	ENST00000487602	SPRR1A	P35321	89 aa		4.98	□□□□□ -1.61
RBM28-206	ENST00000487602	VAMP3	Q15836	100 aa		4.98	□□□□□ -1.61
RBM28-206	ENST00000487602	REG3G	Q6UW15	175 aa		4.98	□□□□□ -1.61
RBM28-206	ENST00000487602	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.97	□□□□□ -1.61
RBM28-206	ENST00000487602	FABP2	P12104	132 aa		4.97	□□□□□ -1.61
RBM28-206	ENST00000487602	COX7B	P24311	80 aa		4.97	□□□□□ -1.61
RBM28-206	ENST00000487602	XG	P55808	180 aa		4.97	□□□□□ -1.61
RBM28-206	ENST00000487602	HAMP	P81172	84 aa		4.97	□□□□□ -1.61
RBM28-206	ENST00000487602	LYRM7	Q5U5X0	104 aa		4.97	□□□□□ -1.61
RBM28-206	ENST00000487602	ETDC	A0A1B0GVM5	59 aa		4.96	□□□□□ -1.62
RBM28-206	ENST00000487602	ELOF1	P60002	83 aa	Known RBP	4.96	□□□□□ -1.62
RBM28-206	ENST00000487602	APOB	P04114	4563 aa	Known RBP	4.96	□□□□□ -1.62
RBM28-206	ENST00000487602		A0A1B0GV90	55 aa		4.95	□□□□□ -1.62
RBM28-206	ENST00000487602		B5MCH6	92 aa		4.95	□□□□□ -1.62
RBM28-206	ENST00000487602	BCE1	O60756	84 aa		4.95	□□□□□ -1.62
RBM28-206	ENST00000487602	TCL1B	O95988	128 aa		4.95	□□□□□ -1.62
RBM28-206	ENST00000487602	FAM19A1	Q7Z5A9	133 aa		4.95	□□□□□ -1.62
RBM28-206	ENST00000487602	CLEC2B	Q92478	149 aa		4.95	□□□□□ -1.62
RBM28-206	ENST00000487602	PSORS1C2	Q9UIG4	136 aa		4.95	□□□□□ -1.62
RBM28-206	ENST00000487602	TRBV20-1	A0A075B6N2	111 aa		4.94	□□□□□ -1.62
RBM28-206	ENST00000487602	INAFM2	P0DMQ5	153 aa		4.94	□□□□□ -1.62
RBM28-206	ENST00000487602	LINC00575	Q6W349	94 aa		4.94	□□□□□ -1.62
RBM28-206	ENST00000487602	FAM218A	Q96MZ4	157 aa		4.94	□□□□□ -1.62
RBM28-206	ENST00000487602	SPCS1	Q9Y6A9	102 aa		4.94	□□□□□ -1.62
RBM28-206	ENST00000487602		A0A1B0GX51	115 aa		4.93	□□□□□ -1.62
RBM28-206	ENST00000487602		H0Y9J4	135 aa		4.93	□□□□□ -1.62
RBM28-206	ENST00000487602	LST1	O00453	97 aa		4.93	□□□□□ -1.62
RBM28-206	ENST00000487602	ATXN8	Q156A1	80 aa		4.93	□□□□□ -1.62
RBM28-206	ENST00000487602	C1orf137	Q5JT78	98 aa		4.93	□□□□□ -1.62
RBM28-206	ENST00000487602		Q6ZRX8	168 aa		4.93	□□□□□ -1.62
RBM28-206	ENST00000487602	EPPK1	P58107	5090 aa	Known RBP	4.93	□□□□□ -1.62
RBM28-206	ENST00000487602	hADV29S1	A0JD25	119 aa		4.92	□□□□□ -1.62
RBM28-206	ENST00000487602		K7EP34	96 aa		4.92	□□□□□ -1.62
RBM28-206	ENST00000487602	SLC25A20	O43772	301 aa		4.92	□□□□□ -1.62
RBM28-206	ENST00000487602	SNCG	O76070	127 aa		4.92	□□□□□ -1.62
RBM28-206	ENST00000487602	TRAC	P01848	142 aa		4.92	□□□□□ -1.62
RBM28-206	ENST00000487602	UBE2A	P49459	152 aa		4.92	□□□□□ -1.62
RBM28-206	ENST00000487602		Q9BRP9	147 aa		4.92	□□□□□ -1.62
RBM28-206	ENST00000487602	DHRS4-AS1	Q9P1J3	65 aa		4.92	□□□□□ -1.62
RBM28-206	ENST00000487602	CDK2AP2	O75956	126 aa		4.91	□□□□□ -1.62
RBM28-206	ENST00000487602	IGLV7-43	P04211	117 aa		4.91	□□□□□ -1.62
RBM28-206	ENST00000487602	PRLH	P81277	87 aa		4.91	□□□□□ -1.62
RBM28-206	ENST00000487602	GTF2H5	Q6ZYL4	71 aa		4.91	□□□□□ -1.62
RBM28-206	ENST00000487602	KRTAP13-1	Q8IUC0	172 aa		4.91	□□□□□ -1.62
RBM28-206	ENST00000487602	SMCR5	Q8TEV8	140 aa		4.91	□□□□□ -1.62
RBM28-206	ENST00000487602	VPS13B	Q7Z7G8	4022 aa		4.91	□□□□□ -1.62
RBM28-206	ENST00000487602		H3BMG7	143 aa		4.9	□□□□□ -1.63
RBM28-206	ENST00000487602	ZNF861P	O60384	105 aa		4.9	□□□□□ -1.63
RBM28-206	ENST00000487602	SMR3B	P02814	79 aa	Predicted RBP	4.9	□□□□□ -1.63
RBM28-206	ENST00000487602	ERC2-IT1	O76042	136 aa		4.89	□□□□□ -1.63
RBM28-206	ENST00000487602	DNAL4	O96015	105 aa		4.89	□□□□□ -1.63
RBM28-206	ENST00000487602	RPL37A	P61513	92 aa	Known RBP	4.89	□□□□□ -1.63
RBM28-206	ENST00000487602	XP32	Q5T750	250 aa		4.89	□□□□□ -1.63
RBM28-206	ENST00000487602	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	4.89	□□□□□ -1.63
RBM28-206	ENST00000487602	HIGD2A	Q9BW72	106 aa		4.89	□□□□□ -1.63
RBM28-206	ENST00000487602	HSPG2	P98160	4391 aa		4.88	□□□□□ -1.63
RBM28-206	ENST00000487602	UBE2V1	Q13404	147 aa		4.88	□□□□□ -1.63
RBM28-206	ENST00000487602		Q6ZQY7	126 aa		4.88	□□□□□ -1.63
RBM28-206	ENST00000487602	RYR1	P21817	5038 aa		4.87	□□□□□ -1.63
RBM28-206	ENST00000487602		C9JAW5	83 aa		4.87	□□□□□ -1.63
RBM28-206	ENST00000487602	BAALC-AS2	P0C853	105 aa		4.87	□□□□□ -1.63
RBM28-206	ENST00000487602	OCIAD2	Q56VL3	154 aa		4.87	□□□□□ -1.63
RBM28-206	ENST00000487602	ORMDL1	Q9P0S3	153 aa		4.87	□□□□□ -1.63
RBM28-206	ENST00000487602		H3BQ85	93 aa		4.86	□□□□□ -1.63
RBM28-206	ENST00000487602	ST20-AS1	Q8NBB2	130 aa		4.86	□□□□□ -1.63
RBM28-206	ENST00000487602	PRO0461	Q9UI25	63 aa		4.86	□□□□□ -1.63
RBM28-206	ENST00000487602	FAT1	Q14517	4588 aa		4.85	□□□□□ -1.63
RBM28-206	ENST00000487602	LINC01547	P58512	204 aa	Predicted RBP	4.85	□□□□□ -1.63
RBM28-206	ENST00000487602	KRTAP10-4	P60372	401 aa	Predicted RBP	4.85	□□□□□ -1.63
RBM28-206	ENST00000487602	MTURN	Q8N3F0	131 aa		4.85	□□□□□ -1.63
RBM28-206	ENST00000487602	IGLV5-48	A0A075B6I7	105 aa		4.84	□□□□□ -1.63
RBM28-206	ENST00000487602		F8W1H4	67 aa		4.84	□□□□□ -1.63
RBM28-206	ENST00000487602		H3BT86	120 aa		4.84	□□□□□ -1.63
RBM28-206	ENST00000487602	TMEM256-PLSCR3	K7ERE1	68 aa		4.84	□□□□□ -1.63
RBM28-206	ENST00000487602	PLA2G1B	P04054	148 aa	Known RBP	4.84	□□□□□ -1.63
RBM28-206	ENST00000487602		Q8N377	158 aa		4.84	□□□□□ -1.63
RBM28-206	ENST00000487602	ANKRD29	Q8N6D5	301 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms