RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 FAM30AQ9NZY2 134 aa8.22□□□□□ -1.09
HSPG2-211ENST00000486901 LYRM9A8MSI8 78 aa8.21□□□□□ -1.09
HSPG2-211ENST00000486901 FAM229BQ4G0N7 80 aa8.21□□□□□ -1.09
HSPG2-211ENST00000486901 FP248Q71RG6 208 aaPredicted RBP8.21□□□□□ -1.1
HSPG2-211ENST00000486901 SPART-AS1P0CW21 52 aa8.21□□□□□ -1.1
HSPG2-211ENST00000486901 HIGD2AQ9BW72 106 aa8.21□□□□□ -1.1
HSPG2-211ENST00000486901 MIFP14174 115 aa8.2□□□□□ -1.1
HSPG2-211ENST00000486901 LELP1Q5T871 98 aa8.2□□□□□ -1.1
HSPG2-211ENST00000486901 DEFB116Q30KQ4 102 aa8.2□□□□□ -1.1
HSPG2-211ENST00000486901 BRK1Q8WUW1 75 aa8.2□□□□□ -1.1
HSPG2-211ENST00000486901 A0A0J9YWU9 116 aa8.2□□□□□ -1.1
HSPG2-211ENST00000486901 TRBV7-6A0A0J9YX20 115 aa8.2□□□□□ -1.1
HSPG2-211ENST00000486901 IGHV4-30-4P0DP06 118 aa8.2□□□□□ -1.1
HSPG2-211ENST00000486901 Q8NAQ8 132 aa8.2□□□□□ -1.1
HSPG2-211ENST00000486901 Q6ZRP5 223 aa8.19□□□□□ -1.1
HSPG2-211ENST00000486901 TMEM254Q8TBM7 123 aa8.19□□□□□ -1.1
HSPG2-211ENST00000486901 VPREB1P12018 145 aa8.18□□□□□ -1.1
HSPG2-211ENST00000486901 C9orf66Q5T8R8 295 aa8.18□□□□□ -1.1
HSPG2-211ENST00000486901 C16orf95Q9H693 158 aa8.18□□□□□ -1.1
HSPG2-211ENST00000486901 SERP1Q9Y6X1 66 aa8.18□□□□□ -1.1
HSPG2-211ENST00000486901 FAM168BA1KXE4 195 aa8.18□□□□□ -1.1
HSPG2-211ENST00000486901 TRBV7-4A0A0J9YYF1 115 aa8.17□□□□□ -1.1
HSPG2-211ENST00000486901 ELOF1P60002 83 aaKnown RBP8.17□□□□□ -1.1
HSPG2-211ENST00000486901 Q6ZTC4 211 aa8.17□□□□□ -1.1
HSPG2-211ENST00000486901 ST20-AS1Q8NBB2 130 aa8.17□□□□□ -1.1
HSPG2-211ENST00000486901 APOC4P55056 127 aa8.17□□□□□ -1.1
HSPG2-211ENST00000486901 KPRPQ5T749 579 aaPredicted RBP8.16□□□□□ -1.1
HSPG2-211ENST00000486901 SERTAD4-AS1Q5TG53 156 aa8.16□□□□□ -1.1
HSPG2-211ENST00000486901 TENM2Q9NT68 2774 aa8.16□□□□□ -1.1
HSPG2-211ENST00000486901 KLKP1Q107X0 134 aa8.16□□□□□ -1.1
HSPG2-211ENST00000486901 COL7A1Q02388 2944 aa8.15□□□□□ -1.1
HSPG2-211ENST00000486901 CXCL6P80162 114 aa8.15□□□□□ -1.11
HSPG2-211ENST00000486901 NKAPP1Q8N9T2 125 aa8.14□□□□□ -1.11
HSPG2-211ENST00000486901 PRR34Q9NV39 138 aa8.14□□□□□ -1.11
HSPG2-211ENST00000486901 NDUFC2-KCTD14E9PQ53 114 aa8.14□□□□□ -1.11
HSPG2-211ENST00000486901 SMIM29Q86T20 159 aa8.14□□□□□ -1.11
HSPG2-211ENST00000486901 IGKV4-1P06312 121 aa8.13□□□□□ -1.11
HSPG2-211ENST00000486901 M0R378 163 aa8.13□□□□□ -1.11
HSPG2-211ENST00000486901 LINC00528Q8N1L1 170 aa8.13□□□□□ -1.11
HSPG2-211ENST00000486901 C15orf56Q8N910 161 aa8.13□□□□□ -1.11
HSPG2-211ENST00000486901 ESRGQ1W209 222 aa8.12□□□□□ -1.11
HSPG2-211ENST00000486901 CASC10Q5T4H9 136 aa8.11□□□□□ -1.11
HSPG2-211ENST00000486901 PDE6GP18545 87 aa8.11□□□□□ -1.11
HSPG2-211ENST00000486901 Q8N377 158 aa8.1□□□□□ -1.11
HSPG2-211ENST00000486901 C7orf33Q8WU49 177 aa8.1□□□□□ -1.11
HSPG2-211ENST00000486901 ANK2Q01484 3957 aa8.1□□□□□ -1.11
HSPG2-211ENST00000486901 SMIM26A0A096LP01 95 aa8.1□□□□□ -1.11
HSPG2-211ENST00000486901 FUSP35637 526 aaKnown RBP eCLIP8.09□□□□□ -1.11
HSPG2-211ENST00000486901 PRYO14603 147 aa8.09□□□□□ -1.12
HSPG2-211ENST00000486901 SYCNQ0VAF6 134 aa8.08□□□□□ -1.12
HSPG2-211ENST00000486901 ERC2-IT1O76042 136 aa8.08□□□□□ -1.12
HSPG2-211ENST00000486901 EGFEM1PQ0D2K5 195 aa8.07□□□□□ -1.12
HSPG2-211ENST00000486901 UBE2BP63146 152 aa8.07□□□□□ -1.12
HSPG2-211ENST00000486901 EPM2AB3EWF7 344 aa8.06□□□□□ -1.12
HSPG2-211ENST00000486901 IGKV2-24A0A0C4DH68 120 aa8.06□□□□□ -1.12
HSPG2-211ENST00000486901 A0A1W2PNM2 257 aa8.06□□□□□ -1.12
HSPG2-211ENST00000486901 DEFB131BA0A096LNP1 70 aa8.05□□□□□ -1.12
HSPG2-211ENST00000486901 GVQW2A0A096LPI5 108 aaPredicted RBP8.05□□□□□ -1.12
HSPG2-211ENST00000486901 WFDC13Q8IUB5 93 aa8.05□□□□□ -1.12
HSPG2-211ENST00000486901 OCR1Q9BZK8 76 aa8.05□□□□□ -1.12
HSPG2-211ENST00000486901 A0A096LNI7 61 aa8.05□□□□□ -1.12
HSPG2-211ENST00000486901 C1orf137Q5JT78 98 aa8.05□□□□□ -1.12
HSPG2-211ENST00000486901 ETDCA0A1B0GVM5 59 aa8.04□□□□□ -1.12
HSPG2-211ENST00000486901 K7EQZ3 153 aa8.04□□□□□ -1.12
HSPG2-211ENST00000486901 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.04□□□□□ -1.12
HSPG2-211ENST00000486901 PSPHP1O15172 72 aa8.04□□□□□ -1.12
HSPG2-211ENST00000486901 KRTAP26-1Q6PEX3 210 aa8.04□□□□□ -1.12
HSPG2-211ENST00000486901 Q9BRP9 147 aa8.04□□□□□ -1.12
HSPG2-211ENST00000486901 PRO0628Q9UI54 55 aa8.04□□□□□ -1.12
HSPG2-211ENST00000486901 C11orf45Q8TAV5 145 aa8.04□□□□□ -1.12
HSPG2-211ENST00000486901 PSCAO43653 123 aa8.03□□□□□ -1.12
HSPG2-211ENST00000486901 UBE2DNLQ8IWF7 75 aa8.02□□□□□ -1.12
HSPG2-211ENST00000486901 WIPF1O43516 503 aa8.02□□□□□ -1.13
HSPG2-211ENST00000486901 RPL37AP61513 92 aaKnown RBP8.01□□□□□ -1.13
HSPG2-211ENST00000486901 PRLHP81277 87 aa8□□□□□ -1.13
HSPG2-211ENST00000486901 KRTAP24-1Q3LI83 254 aa8□□□□□ -1.13
HSPG2-211ENST00000486901 NDUFC1O43677 76 aa7.98□□□□□ -1.13
HSPG2-211ENST00000486901 KRTAP10-11P60412 298 aa7.98□□□□□ -1.13
HSPG2-211ENST00000486901 BCE1O60756 84 aa7.97□□□□□ -1.13
HSPG2-211ENST00000486901 Q6ZRX8 168 aa7.96□□□□□ -1.13
HSPG2-211ENST00000486901 DSCR10P59022 87 aa7.96□□□□□ -1.14
HSPG2-211ENST00000486901 KCNQ1DNQ9H478 68 aa7.96□□□□□ -1.14
HSPG2-211ENST00000486901 KRTAP7-1Q8IUC3 87 aa7.95□□□□□ -1.14
HSPG2-211ENST00000486901 C1orf64Q8NEQ6 169 aa7.95□□□□□ -1.14
HSPG2-211ENST00000486901 LYSTQ99698 3801 aa7.95□□□□□ -1.14
HSPG2-211ENST00000486901 A0A087WSZ3 146 aa7.94□□□□□ -1.14
HSPG2-211ENST00000486901 H3BQ85 93 aa7.94□□□□□ -1.14
HSPG2-211ENST00000486901 A8MU10 97 aa7.94□□□□□ -1.14
HSPG2-211ENST00000486901 DNAH10Q8IVF4 4471 aa7.92□□□□□ -1.14
HSPG2-211ENST00000486901 Q8NBF4 154 aa7.92□□□□□ -1.14
HSPG2-211ENST00000486901 LINC00476Q8WZB0 136 aa7.92□□□□□ -1.14
HSPG2-211ENST00000486901 C1orf195Q5TG92 126 aa7.92□□□□□ -1.14
HSPG2-211ENST00000486901 V9GYY9 64 aa7.92□□□□□ -1.14
HSPG2-211ENST00000486901 IGLV5-48A0A075B6I7 105 aa7.91□□□□□ -1.14
HSPG2-211ENST00000486901 IGLV1-50A0A075B6I6 118 aa7.91□□□□□ -1.14
HSPG2-211ENST00000486901 MRPL55Q7Z7F7 128 aaKnown RBP7.9□□□□□ -1.14
HSPG2-211ENST00000486901 LINC00208Q96KT6 92 aa7.9□□□□□ -1.14
HSPG2-211ENST00000486901 TGP01266 2768 aa7.89□□□□□ -1.15
HSPG2-211ENST00000486901 CHTF8P0CG12 524 aa7.89□□□□□ -1.15
HSPG2-211ENST00000486901 LINC01556Q5JQF7 62 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms