RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 FAM19A1Q7Z5A9 133 aa7□□□□□ -1.29
NUP50-216ENST00000486184 SRRM2Q9UQ35 2752 aaKnown RBP6.99□□□□□ -1.29
NUP50-216ENST00000486184 TRAV23DV6A0A075B6W5 121 aa6.99□□□□□ -1.29
NUP50-216ENST00000486184 ETDCA0A1B0GVM5 59 aa6.99□□□□□ -1.29
NUP50-216ENST00000486184 A6NDN8 102 aa6.99□□□□□ -1.29
NUP50-216ENST00000486184 C2orf91Q6ZV80 131 aa6.99□□□□□ -1.29
NUP50-216ENST00000486184 KCNQ1DNQ9H478 68 aa6.99□□□□□ -1.29
NUP50-216ENST00000486184 TRAV13-2A0A0B4J235 113 aa6.98□□□□□ -1.29
NUP50-216ENST00000486184 IGLV6-57P01721 117 aa6.98□□□□□ -1.29
NUP50-216ENST00000486184 HNRNPA3P51991 378 aaKnown RBP6.98□□□□□ -1.29
NUP50-216ENST00000486184 TAL2Q16559 108 aa6.98□□□□□ -1.29
NUP50-216ENST00000486184 DIRC1Q969H9 104 aa6.98□□□□□ -1.29
NUP50-216ENST00000486184 A4D1N5 150 aa6.97□□□□□ -1.29
NUP50-216ENST00000486184 ZNF861PO60384 105 aa6.97□□□□□ -1.29
NUP50-216ENST00000486184 HINT1P49773 126 aaPredicted RBP6.97□□□□□ -1.29
NUP50-216ENST00000486184 LINC00337Q8N6G1 96 aa6.97□□□□□ -1.29
NUP50-216ENST00000486184 PRLHP81277 87 aa6.96□□□□□ -1.3
NUP50-216ENST00000486184 PRO1933Q9H354 126 aa6.96□□□□□ -1.3
NUP50-216ENST00000486184 ZNF73O43830 326 aaPredicted RBP6.95□□□□□ -1.3
NUP50-216ENST00000486184 HSD52Q0P140 79 aa6.95□□□□□ -1.3
NUP50-216ENST00000486184 CEND1Q8N111 149 aa6.95□□□□□ -1.3
NUP50-216ENST00000486184 C12orf57Q99622 126 aa6.95□□□□□ -1.3
NUP50-216ENST00000486184 FAT1Q14517 4588 aa6.95□□□□□ -1.3
NUP50-216ENST00000486184 VPS13BQ7Z7G8 4022 aa6.95□□□□□ -1.3
NUP50-216ENST00000486184 TSTD3H0UI37 97 aa6.94□□□□□ -1.3
NUP50-216ENST00000486184 H0Y9J4 135 aa6.94□□□□□ -1.3
NUP50-216ENST00000486184 SPRR1AP35321 89 aa6.94□□□□□ -1.3
NUP50-216ENST00000486184 RAB37Q96AX2 223 aa6.94□□□□□ -1.3
NUP50-216ENST00000486184 HIGD2AQ9BW72 106 aa6.93□□□□□ -1.3
NUP50-216ENST00000486184 RPL13AP40429 203 aaKnown RBP6.92□□□□□ -1.3
NUP50-216ENST00000486184 B5MCH6 92 aa6.91□□□□□ -1.3
NUP50-216ENST00000486184 Q6ZRX8 168 aa6.91□□□□□ -1.3
NUP50-216ENST00000486184 KRTAP13-1Q8IUC0 172 aa6.91□□□□□ -1.3
NUP50-216ENST00000486184 ABCA13Q86UQ4 5058 aa6.91□□□□□ -1.3
NUP50-216ENST00000486184 KRTAP4-16G5E9R7 235 aaPredicted RBP6.9□□□□□ -1.3
NUP50-216ENST00000486184 COX7BP24311 80 aa6.9□□□□□ -1.3
NUP50-216ENST00000486184 C6orf99Q4VX62 202 aa6.9□□□□□ -1.3
NUP50-216ENST00000486184 A0A0B4J2C4 111 aa6.89□□□□□ -1.31
NUP50-216ENST00000486184 H7C2G1 150 aa6.89□□□□□ -1.31
NUP50-216ENST00000486184 OXTP01178 125 aa6.89□□□□□ -1.31
NUP50-216ENST00000486184 CFC1BP0CG36 223 aa6.89□□□□□ -1.31
NUP50-216ENST00000486184 CFC1P0CG37 223 aa6.89□□□□□ -1.31
NUP50-216ENST00000486184 FXYD2P54710 66 aa6.89□□□□□ -1.31
NUP50-216ENST00000486184 VAMP3Q15836 100 aa6.89□□□□□ -1.31
NUP50-216ENST00000486184 Q1RN00 199 aa6.89□□□□□ -1.31
NUP50-216ENST00000486184 SMIM11BQ8TCY0 68 aa6.89□□□□□ -1.31
NUP50-216ENST00000486184 ZNF706Q9Y5V0 76 aaPredicted RBP6.89□□□□□ -1.31
NUP50-216ENST00000486184 FLG2Q5D862 2391 aaPredicted RBP6.89□□□□□ -1.31
NUP50-216ENST00000486184 NHP2Q9NX24 153 aaKnown RBP6.88□□□□□ -1.31
NUP50-216ENST00000486184 TRBV7-6A0A0J9YX20 115 aa6.87□□□□□ -1.31
NUP50-216ENST00000486184 A0A1B0GWB2 263 aa6.87□□□□□ -1.31
NUP50-216ENST00000486184 M0R143 59 aa6.87□□□□□ -1.31
NUP50-216ENST00000486184 ELOF1P60002 83 aaKnown RBP6.87□□□□□ -1.31
NUP50-216ENST00000486184 SMCR5Q8TEV8 140 aa6.87□□□□□ -1.31
NUP50-216ENST00000486184 DHRS4-AS1Q9P1J3 65 aa6.87□□□□□ -1.31
NUP50-216ENST00000486184 PRO1854Q9UHT4 67 aa6.87□□□□□ -1.31
NUP50-216ENST00000486184 KRTAP29-1A8MX34 341 aaPredicted RBP6.86□□□□□ -1.31
NUP50-216ENST00000486184 CTAG1AP78358 180 aa6.86□□□□□ -1.31
NUP50-216ENST00000486184 PCLOQ9Y6V0 5065 aa6.85□□□□□ -1.31
NUP50-216ENST00000486184 PKHD1L1Q86WI1 4243 aa6.85□□□□□ -1.31
NUP50-216ENST00000486184 BVES-AS1Q5T3Y7 98 aa6.85□□□□□ -1.31
NUP50-216ENST00000486184 LINC01600Q96MT4 127 aa6.85□□□□□ -1.31
NUP50-216ENST00000486184 Q9BRP9 147 aa6.85□□□□□ -1.31
NUP50-216ENST00000486184 SLC25A20O43772 301 aa6.84□□□□□ -1.31
NUP50-216ENST00000486184 SPRR4Q96PI1 79 aa6.83□□□□□ -1.32
NUP50-216ENST00000486184 K7ERJ3 54 aa6.82□□□□□ -1.32
NUP50-216ENST00000486184 KRTAP1-4P0C5Y4 121 aa6.82□□□□□ -1.32
NUP50-216ENST00000486184 CRYGAP11844 174 aa6.82□□□□□ -1.32
NUP50-216ENST00000486184 ERC2-IT1O76042 136 aa6.81□□□□□ -1.32
NUP50-216ENST00000486184 SNCGO76070 127 aa6.81□□□□□ -1.32
NUP50-216ENST00000486184 PSMB2P49721 201 aa6.81□□□□□ -1.32
NUP50-216ENST00000486184 FAM229BQ4G0N7 80 aa6.81□□□□□ -1.32
NUP50-216ENST00000486184 GAGE2AQ6NT46 116 aa6.81□□□□□ -1.32
NUP50-216ENST00000486184 PRR26Q8N8Z3 221 aa6.8□□□□□ -1.32
NUP50-216ENST00000486184 ANAPC11Q9NYG5 84 aa6.8□□□□□ -1.32
NUP50-216ENST00000486184 H0YGX0 51 aa6.79□□□□□ -1.32
NUP50-216ENST00000486184 COX6CP09669 75 aa6.79□□□□□ -1.32
NUP50-216ENST00000486184 BATFQ16520 125 aa6.79□□□□□ -1.32
NUP50-216ENST00000486184 hADV29S1A0JD25 119 aa6.78□□□□□ -1.32
NUP50-216ENST00000486184 LINC00575Q6W349 94 aa6.78□□□□□ -1.32
NUP50-216ENST00000486184 ST20-AS1Q8NBB2 130 aa6.78□□□□□ -1.32
NUP50-216ENST00000486184 A0A087X002 238 aa6.77□□□□□ -1.33
NUP50-216ENST00000486184 TSPAN13O95857 204 aa6.77□□□□□ -1.33
NUP50-216ENST00000486184 DEFB105AQ8NG35 78 aa6.77□□□□□ -1.33
NUP50-216ENST00000486184 TYMSOSQ8TAI1 123 aa6.77□□□□□ -1.33
NUP50-216ENST00000486184 TRIAP1O43715 76 aa6.76□□□□□ -1.33
NUP50-216ENST00000486184 LINC00483Q53H64 154 aa6.76□□□□□ -1.33
NUP50-216ENST00000486184 TEX49A0A1B0GTD5 131 aa6.75□□□□□ -1.33
NUP50-216ENST00000486184 MT1HL1P0DM35 61 aa6.75□□□□□ -1.33
NUP50-216ENST00000486184 KRTAP10-8P60410 259 aa6.75□□□□□ -1.33
NUP50-216ENST00000486184 MYCBP2O75592 4640 aa6.75□□□□□ -1.33
NUP50-216ENST00000486184 DMBT1Q9UGM3 2413 aaPredicted RBP6.75□□□□□ -1.33
NUP50-216ENST00000486184 IGLV9-49A0A0B4J1Y8 123 aa6.74□□□□□ -1.33
NUP50-216ENST00000486184 SCGB1C2P0DMR2 95 aa6.74□□□□□ -1.33
NUP50-216ENST00000486184 Q6ZQY7 126 aa6.74□□□□□ -1.33
NUP50-216ENST00000486184 LAMTOR3Q9UHA4 124 aa6.74□□□□□ -1.33
NUP50-216ENST00000486184 KRTAP13-2Q52LG2 175 aa6.73□□□□□ -1.33
NUP50-216ENST00000486184 C9orf153Q5TBE3 101 aa6.73□□□□□ -1.33
NUP50-216ENST00000486184 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.73□□□□□ -1.33
NUP50-216ENST00000486184 A0A1B0GX51 115 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms