RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 IGLV6-57P01721 117 aa7.49□□□□□ -1.21
HDAC1-209ENST00000484305 S100A7L2Q5SY68 101 aa7.49□□□□□ -1.21
HDAC1-209ENST00000484305 TTTY13Q9BZ97 58 aa7.49□□□□□ -1.21
HDAC1-209ENST00000484305 RNF213Q63HN8 5207 aa7.49□□□□□ -1.21
HDAC1-209ENST00000484305 ZNF706Q9Y5V0 76 aaPredicted RBP7.48□□□□□ -1.21
HDAC1-209ENST00000484305 ZNF815PA8K554 130 aa7.47□□□□□ -1.21
HDAC1-209ENST00000484305 LINC00308Q8TCZ7 52 aa7.47□□□□□ -1.21
HDAC1-209ENST00000484305 TIMM17BO60830 172 aa7.46□□□□□ -1.22
HDAC1-209ENST00000484305 ERC2-IT1O76042 136 aa7.46□□□□□ -1.22
HDAC1-209ENST00000484305 Q6ZRX8 168 aa7.46□□□□□ -1.22
HDAC1-209ENST00000484305 RETNLBQ9BQ08 111 aa7.46□□□□□ -1.22
HDAC1-209ENST00000484305 Q9BRP9 147 aa7.46□□□□□ -1.22
HDAC1-209ENST00000484305 PPDPFQ9H3Y8 114 aa7.46□□□□□ -1.22
HDAC1-209ENST00000484305 TRAV23DV6A0A075B6W5 121 aa7.45□□□□□ -1.22
HDAC1-209ENST00000484305 GAGE2AQ6NT46 116 aa7.44□□□□□ -1.22
HDAC1-209ENST00000484305 ATOH7Q8N100 152 aa7.44□□□□□ -1.22
HDAC1-209ENST00000484305 SPANXCQ9NY87 97 aa7.44□□□□□ -1.22
HDAC1-209ENST00000484305 C20orf202A1L168 122 aa7.43□□□□□ -1.22
HDAC1-209ENST00000484305 ZNF73O43830 326 aaPredicted RBP7.43□□□□□ -1.22
HDAC1-209ENST00000484305 LINC00483Q53H64 154 aa7.43□□□□□ -1.22
HDAC1-209ENST00000484305 ANKRD39Q53RE8 183 aa7.43□□□□□ -1.22
HDAC1-209ENST00000484305 CTAG1AP78358 180 aa7.42□□□□□ -1.22
HDAC1-209ENST00000484305 S100A1P23297 94 aa7.41□□□□□ -1.22
HDAC1-209ENST00000484305 Q8NBF4 154 aa7.41□□□□□ -1.22
HDAC1-209ENST00000484305 OR13C6PQ8NH95 151 aa7.41□□□□□ -1.22
HDAC1-209ENST00000484305 JOSD1Q15040 202 aaPredicted RBP7.4□□□□□ -1.22
HDAC1-209ENST00000484305 SPAG11AQ6PDA7 123 aa7.4□□□□□ -1.22
HDAC1-209ENST00000484305 SCGB1D4Q6XE38 83 aa7.4□□□□□ -1.22
HDAC1-209ENST00000484305 PCP2Q8IVA1 136 aa7.39□□□□□ -1.23
HDAC1-209ENST00000484305 HIST3H2BBQ8N257 126 aa7.39□□□□□ -1.23
HDAC1-209ENST00000484305 SPANXDQ9BXN6 97 aa7.39□□□□□ -1.23
HDAC1-209ENST00000484305 IGLV9-49A0A0B4J1Y8 123 aa7.38□□□□□ -1.23
HDAC1-209ENST00000484305 HIST1H2BLQ99880 126 aa7.38□□□□□ -1.23
HDAC1-209ENST00000484305 CBY1Q9Y3M2 126 aa7.38□□□□□ -1.23
HDAC1-209ENST00000484305 HINT1P49773 126 aaPredicted RBP7.37□□□□□ -1.23
HDAC1-209ENST00000484305 MOBPQ13875 183 aa7.37□□□□□ -1.23
HDAC1-209ENST00000484305 LINC00518Q8N0U6 118 aa7.37□□□□□ -1.23
HDAC1-209ENST00000484305 ST20-AS1Q8NBB2 130 aa7.37□□□□□ -1.23
HDAC1-209ENST00000484305 IGLV7-46A0A075B6I9 117 aa7.36□□□□□ -1.23
HDAC1-209ENST00000484305 S100A2P29034 98 aa7.36□□□□□ -1.23
HDAC1-209ENST00000484305 AKR1D1P51857 326 aa7.36□□□□□ -1.23
HDAC1-209ENST00000484305 LOC100996750A0A140TA64 210 aa7.34□□□□□ -1.23
HDAC1-209ENST00000484305 IFITM1P13164 125 aa7.34□□□□□ -1.23
HDAC1-209ENST00000484305 SSBP3-AS1Q7Z2R9 100 aa7.34□□□□□ -1.23
HDAC1-209ENST00000484305 MUSTN1Q8IVN3 82 aa7.34□□□□□ -1.23
HDAC1-209ENST00000484305 KRTAP4-6Q9BYQ5 205 aa7.34□□□□□ -1.23
HDAC1-209ENST00000484305 SPINK1P00995 79 aa7.33□□□□□ -1.24
HDAC1-209ENST00000484305 SNRPEP62304 92 aaKnown RBP7.33□□□□□ -1.24
HDAC1-209ENST00000484305 TPRXLQ17RH7 258 aa7.33□□□□□ -1.24
HDAC1-209ENST00000484305 C6orf99Q4VX62 202 aa7.33□□□□□ -1.24
HDAC1-209ENST00000484305 Q6ZVH6 145 aa7.33□□□□□ -1.24
HDAC1-209ENST00000484305 DHRS4-AS1Q9P1J3 65 aa7.33□□□□□ -1.24
HDAC1-209ENST00000484305 C5orf52A6NGY3 159 aa7.32□□□□□ -1.24
HDAC1-209ENST00000484305 S100A6P06703 90 aa7.32□□□□□ -1.24
HDAC1-209ENST00000484305 COX7BP24311 80 aa7.32□□□□□ -1.24
HDAC1-209ENST00000484305 ELOF1P60002 83 aaKnown RBP7.32□□□□□ -1.24
HDAC1-209ENST00000484305 COPS9Q8WXC6 57 aa7.32□□□□□ -1.24
HDAC1-209ENST00000484305 C9orf153Q5TBE3 101 aa7.31□□□□□ -1.24
HDAC1-209ENST00000484305 A6NDN8 102 aa7.3□□□□□ -1.24
HDAC1-209ENST00000484305 SPRR1BP22528 89 aa7.3□□□□□ -1.24
HDAC1-209ENST00000484305 FP248Q71RG6 208 aaPredicted RBP7.3□□□□□ -1.24
HDAC1-209ENST00000484305 CDIP1Q9H305 208 aa7.3□□□□□ -1.24
HDAC1-209ENST00000484305 HSBP1L1C9JCN9 74 aa7.29□□□□□ -1.24
HDAC1-209ENST00000484305 TRBV7-6A0A0J9YX20 115 aa7.28□□□□□ -1.24
HDAC1-209ENST00000484305 RPS29P62273 56 aaKnown RBP7.28□□□□□ -1.24
HDAC1-209ENST00000484305 Q8N377 158 aa7.28□□□□□ -1.24
HDAC1-209ENST00000484305 MUC2Q02817 5179 aa7.28□□□□□ -1.24
HDAC1-209ENST00000484305 A0A1B0GWB2 263 aa7.26□□□□□ -1.25
HDAC1-209ENST00000484305 SCGB1D1O95968 90 aa7.26□□□□□ -1.25
HDAC1-209ENST00000484305 DEFB105AQ8NG35 78 aa7.26□□□□□ -1.25
HDAC1-209ENST00000484305 TRAV13-2A0A0B4J235 113 aa7.25□□□□□ -1.25
HDAC1-209ENST00000484305 TAL2Q16559 108 aa7.25□□□□□ -1.25
HDAC1-209ENST00000484305 KRTAP13-3Q3SY46 172 aa7.25□□□□□ -1.25
HDAC1-209ENST00000484305 SLC25A34Q6PIV7 304 aa7.25□□□□□ -1.25
HDAC1-209ENST00000484305 SMIM11BQ8TCY0 68 aa7.25□□□□□ -1.25
HDAC1-209ENST00000484305 SLC25A20O43772 301 aa7.24□□□□□ -1.25
HDAC1-209ENST00000484305 LAMTOR3Q9UHA4 124 aa7.24□□□□□ -1.25
HDAC1-209ENST00000484305 TEX49A0A1B0GTD5 131 aa7.23□□□□□ -1.25
HDAC1-209ENST00000484305 Q1RN00 199 aa7.23□□□□□ -1.25
HDAC1-209ENST00000484305 A4D1N5 150 aa7.22□□□□□ -1.25
HDAC1-209ENST00000484305 LINC01547P58512 204 aaPredicted RBP7.22□□□□□ -1.25
HDAC1-209ENST00000484305 HRCT1Q6UXD1 115 aa7.22□□□□□ -1.25
HDAC1-209ENST00000484305 SMIM29Q86T20 159 aa7.21□□□□□ -1.26
HDAC1-209ENST00000484305 MUC17Q685J3 4493 aa7.21□□□□□ -1.26
HDAC1-209ENST00000484305 IGLV5-48A0A075B6I7 105 aa7.2□□□□□ -1.26
HDAC1-209ENST00000484305 COX8AP10176 69 aa7.2□□□□□ -1.26
HDAC1-209ENST00000484305 HIST1H4GQ99525 98 aa7.18□□□□□ -1.26
HDAC1-209ENST00000484305 C12orf57Q99622 126 aa7.18□□□□□ -1.26
HDAC1-209ENST00000484305 PRO1933Q9H354 126 aa7.17□□□□□ -1.26
HDAC1-209ENST00000484305 NHP2Q9NX24 153 aaKnown RBP7.17□□□□□ -1.26
HDAC1-209ENST00000484305 A0A0G2JQZ4 141 aa7.16□□□□□ -1.26
HDAC1-209ENST00000484305 A0A0U1RQV1 116 aa7.16□□□□□ -1.26
HDAC1-209ENST00000484305 DLEU1O43261 78 aa7.16□□□□□ -1.26
HDAC1-209ENST00000484305 VAMP3Q15836 100 aa7.16□□□□□ -1.26
HDAC1-209ENST00000484305 LINC00575Q6W349 94 aa7.16□□□□□ -1.26
HDAC1-209ENST00000484305 C14orf144Q96I85 54 aa7.16□□□□□ -1.26
HDAC1-209ENST00000484305 LIMD2Q9BT23 127 aa7.16□□□□□ -1.26
HDAC1-209ENST00000484305 CD164Q04900 197 aa7.15□□□□□ -1.26
HDAC1-209ENST00000484305 PAM16Q9Y3D7 125 aa7.15□□□□□ -1.26
HDAC1-209ENST00000484305 H7C2G1 150 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms