RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 PRYO14603 147 aa10.89□□□□□ -0.67
CPNE1-224ENST00000483359 PRLHP81277 87 aa10.89□□□□□ -0.67
CPNE1-224ENST00000483359 FAM19A1Q7Z5A9 133 aa10.89□□□□□ -0.67
CPNE1-224ENST00000483359 PKHD1L1Q86WI1 4243 aa10.89□□□□□ -0.67
CPNE1-224ENST00000483359 COL5A1-AS1Q5SY13 56 aa10.88□□□□□ -0.67
CPNE1-224ENST00000483359 KCNQ1DNQ9H478 68 aa10.88□□□□□ -0.67
CPNE1-224ENST00000483359 UBE2AP49459 152 aa10.88□□□□□ -0.67
CPNE1-224ENST00000483359 MYCBP2O75592 4640 aa10.87□□□□□ -0.67
CPNE1-224ENST00000483359 TRAV23DV6A0A075B6W5 121 aa10.87□□□□□ -0.67
CPNE1-224ENST00000483359 A6NDN8 102 aa10.87□□□□□ -0.67
CPNE1-224ENST00000483359 FLG2Q5D862 2391 aaPredicted RBP10.87□□□□□ -0.67
CPNE1-224ENST00000483359 SPINK6Q6UWN8 80 aa10.86□□□□□ -0.67
CPNE1-224ENST00000483359 ZNF861PO60384 105 aa10.85□□□□□ -0.67
CPNE1-224ENST00000483359 RPL28P46779 137 aaKnown RBP10.84□□□□□ -0.67
CPNE1-224ENST00000483359 ETDCA0A1B0GVM5 59 aa10.83□□□□□ -0.68
CPNE1-224ENST00000483359 SPRR1AP35321 89 aa10.83□□□□□ -0.68
CPNE1-224ENST00000483359 ZNF73O43830 326 aaPredicted RBP10.83□□□□□ -0.68
CPNE1-224ENST00000483359 CEND1Q8N111 149 aa10.83□□□□□ -0.68
CPNE1-224ENST00000483359 TRAV13-2A0A0B4J235 113 aa10.82□□□□□ -0.68
CPNE1-224ENST00000483359 TMEM238LA0A1B0GVL6 79 aa10.82□□□□□ -0.68
CPNE1-224ENST00000483359 TAL2Q16559 108 aa10.82□□□□□ -0.68
CPNE1-224ENST00000483359 KRTAP13-1Q8IUC0 172 aa10.82□□□□□ -0.68
CPNE1-224ENST00000483359 LRP1Q07954 4544 aaKnown RBP10.82□□□□□ -0.68
CPNE1-224ENST00000483359 KRTAP4-16G5E9R7 235 aaPredicted RBP10.81□□□□□ -0.68
CPNE1-224ENST00000483359 HSD52Q0P140 79 aa10.81□□□□□ -0.68
CPNE1-224ENST00000483359 DIRC1Q969H9 104 aa10.81□□□□□ -0.68
CPNE1-224ENST00000483359 HIGD2AQ9BW72 106 aa10.81□□□□□ -0.68
CPNE1-224ENST00000483359 H0Y9J4 135 aa10.8□□□□□ -0.68
CPNE1-224ENST00000483359 FXYD2P54710 66 aa10.8□□□□□ -0.68
CPNE1-224ENST00000483359 RPL13AP40429 203 aaKnown RBP10.78□□□□□ -0.68
CPNE1-224ENST00000483359 C6orf99Q4VX62 202 aa10.78□□□□□ -0.68
CPNE1-224ENST00000483359 B5MCH6 92 aa10.77□□□□□ -0.68
CPNE1-224ENST00000483359 CFC1BP0CG36 223 aa10.77□□□□□ -0.68
CPNE1-224ENST00000483359 CFC1P0CG37 223 aa10.77□□□□□ -0.68
CPNE1-224ENST00000483359 FAT3Q8TDW7 4589 aa10.77□□□□□ -0.69
CPNE1-224ENST00000483359 A6NJY4 79 aa10.76□□□□□ -0.69
CPNE1-224ENST00000483359 UBE2V1Q13404 147 aa10.76□□□□□ -0.69
CPNE1-224ENST00000483359 BATFQ16520 125 aa10.76□□□□□ -0.69
CPNE1-224ENST00000483359 Q6ZRX8 168 aa10.76□□□□□ -0.69
CPNE1-224ENST00000483359 RAB37Q96AX2 223 aa10.76□□□□□ -0.69
CPNE1-224ENST00000483359 SMIM11BQ8TCY0 68 aa10.76□□□□□ -0.69
CPNE1-224ENST00000483359 H7C2G1 150 aa10.75□□□□□ -0.69
CPNE1-224ENST00000483359 HINT1P49773 126 aaPredicted RBP10.75□□□□□ -0.69
CPNE1-224ENST00000483359 SMCR5Q8TEV8 140 aa10.74□□□□□ -0.69
CPNE1-224ENST00000483359 Q9BRP9 147 aa10.74□□□□□ -0.69
CPNE1-224ENST00000483359 A0A0B4J2C4 111 aa10.73□□□□□ -0.69
CPNE1-224ENST00000483359 NHP2Q9NX24 153 aaKnown RBP10.73□□□□□ -0.69
CPNE1-224ENST00000483359 K7ERJ3 54 aa10.71□□□□□ -0.69
CPNE1-224ENST00000483359 COX7BP24311 80 aa10.71□□□□□ -0.69
CPNE1-224ENST00000483359 ELOF1P60002 83 aaKnown RBP10.7□□□□□ -0.7
CPNE1-224ENST00000483359 VPS25Q9BRG1 176 aa10.7□□□□□ -0.7
CPNE1-224ENST00000483359 ERC2-IT1O76042 136 aa10.7□□□□□ -0.7
CPNE1-224ENST00000483359 KRTAP1-4P0C5Y4 121 aa10.7□□□□□ -0.7
CPNE1-224ENST00000483359 ANAPC11Q9NYG5 84 aa10.69□□□□□ -0.7
CPNE1-224ENST00000483359 Q1RN00 199 aa10.68□□□□□ -0.7
CPNE1-224ENST00000483359 BVES-AS1Q5T3Y7 98 aa10.68□□□□□ -0.7
CPNE1-224ENST00000483359 PRO1854Q9UHT4 67 aa10.68□□□□□ -0.7
CPNE1-224ENST00000483359 A0A1B0GWB2 263 aa10.66□□□□□ -0.7
CPNE1-224ENST00000483359 KRTAP29-1A8MX34 341 aaPredicted RBP10.66□□□□□ -0.7
CPNE1-224ENST00000483359 OXTP01178 125 aa10.66□□□□□ -0.7
CPNE1-224ENST00000483359 LINC01600Q96MT4 127 aa10.66□□□□□ -0.7
CPNE1-224ENST00000483359 J3QL48 77 aa10.65□□□□□ -0.7
CPNE1-224ENST00000483359 PRR26Q8N8Z3 221 aa10.65□□□□□ -0.7
CPNE1-224ENST00000483359 TRBV7-6A0A0J9YX20 115 aa10.65□□□□□ -0.71
CPNE1-224ENST00000483359 SPRR4Q96PI1 79 aa10.64□□□□□ -0.71
CPNE1-224ENST00000483359 ST20-AS1Q8NBB2 130 aa10.63□□□□□ -0.71
CPNE1-224ENST00000483359 DHRS4-AS1Q9P1J3 65 aa10.63□□□□□ -0.71
CPNE1-224ENST00000483359 K7ERU9 68 aa10.63□□□□□ -0.71
CPNE1-224ENST00000483359 VAMP3Q15836 100 aa10.63□□□□□ -0.71
CPNE1-224ENST00000483359 ZNF706Q9Y5V0 76 aaPredicted RBP10.63□□□□□ -0.71
CPNE1-224ENST00000483359 A0A087X002 238 aa10.62□□□□□ -0.71
CPNE1-224ENST00000483359 OCIAD2Q56VL3 154 aa10.62□□□□□ -0.71
CPNE1-224ENST00000483359 GAGE2AQ6NT46 116 aa10.62□□□□□ -0.71
CPNE1-224ENST00000483359 TNXBP22105 4242 aa10.61□□□□□ -0.71
CPNE1-224ENST00000483359 MT1HL1P0DM35 61 aa10.61□□□□□ -0.71
CPNE1-224ENST00000483359 DMBT1Q9UGM3 2413 aaPredicted RBP10.58□□□□□ -0.72
CPNE1-224ENST00000483359 TSPAN13O95857 204 aa10.58□□□□□ -0.72
CPNE1-224ENST00000483359 TRIAP1O43715 76 aa10.57□□□□□ -0.72
CPNE1-224ENST00000483359 CRYGAP11844 174 aa10.57□□□□□ -0.72
CPNE1-224ENST00000483359 SLC25A20O43772 301 aa10.57□□□□□ -0.72
CPNE1-224ENST00000483359 PSMB2P49721 201 aa10.57□□□□□ -0.72
CPNE1-224ENST00000483359 LINC00575Q6W349 94 aa10.57□□□□□ -0.72
CPNE1-224ENST00000483359 DEFB105AQ8NG35 78 aa10.56□□□□□ -0.72
CPNE1-224ENST00000483359 KRTAP10-8P60410 259 aa10.56□□□□□ -0.72
CPNE1-224ENST00000483359 FAM229BQ4G0N7 80 aa10.55□□□□□ -0.72
CPNE1-224ENST00000483359 hADV29S1A0JD25 119 aa10.54□□□□□ -0.72
CPNE1-224ENST00000483359 KRTAP13-2Q52LG2 175 aa10.54□□□□□ -0.72
CPNE1-224ENST00000483359 LINC00483Q53H64 154 aa10.54□□□□□ -0.72
CPNE1-224ENST00000483359 C3orf22Q8N5N4 141 aa10.54□□□□□ -0.72
CPNE1-224ENST00000483359 FAM218AQ96MZ4 157 aa10.53□□□□□ -0.72
CPNE1-224ENST00000483359 TYMSOSQ8TAI1 123 aa10.52□□□□□ -0.72
CPNE1-224ENST00000483359 IGLV9-49A0A0B4J1Y8 123 aa10.51□□□□□ -0.73
CPNE1-224ENST00000483359 H0YGX0 51 aa10.51□□□□□ -0.73
CPNE1-224ENST00000483359 Q6ZQY7 126 aa10.51□□□□□ -0.73
CPNE1-224ENST00000483359 CLEC2BQ92478 149 aa10.51□□□□□ -0.73
CPNE1-224ENST00000483359 HERC1Q15751 4861 aa10.51□□□□□ -0.73
CPNE1-224ENST00000483359 NAA38Q9BRA0 125 aaKnown RBP10.5□□□□□ -0.73
CPNE1-224ENST00000483359 COX6CP09669 75 aa10.48□□□□□ -0.73
CPNE1-224ENST00000483359 SCGB1A1P11684 91 aa10.48□□□□□ -0.73
CPNE1-224ENST00000483359 LINC01547P58512 204 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 275.2 ms