RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 FUSP35637 526 aaKnown RBP eCLIP8.5□□□□□ -1.05
VPS52-218ENST00000482399 LOC110117498A0A087WWA1 95 aa8.5□□□□□ -1.05
VPS52-218ENST00000482399 A0A0J9YWU9 116 aa8.49□□□□□ -1.05
VPS52-218ENST00000482399 TRBV7-6A0A0J9YX20 115 aa8.48□□□□□ -1.05
VPS52-218ENST00000482399 SYCNQ0VAF6 134 aa8.48□□□□□ -1.05
VPS52-218ENST00000482399 DEFB116Q30KQ4 102 aa8.48□□□□□ -1.05
VPS52-218ENST00000482399 LINC00612Q8N6U2 182 aa8.48□□□□□ -1.05
VPS52-218ENST00000482399 NDUFC2-KCTD14E9PQ53 114 aa8.48□□□□□ -1.05
VPS52-218ENST00000482399 Q8NAQ8 132 aa8.48□□□□□ -1.05
VPS52-218ENST00000482399 HIGD2AQ9BW72 106 aa8.48□□□□□ -1.05
VPS52-218ENST00000482399 CXCL6P80162 114 aa8.47□□□□□ -1.05
VPS52-218ENST00000482399 Q5XG85 94 aa8.47□□□□□ -1.05
VPS52-218ENST00000482399 ELOF1P60002 83 aaKnown RBP8.46□□□□□ -1.05
VPS52-218ENST00000482399 KRTAP1-1Q07627 177 aa8.46□□□□□ -1.06
VPS52-218ENST00000482399 NSD1Q96L73 2696 aaPredicted RBP8.46□□□□□ -1.06
VPS52-218ENST00000482399 VPREB1P12018 145 aa8.46□□□□□ -1.06
VPS52-218ENST00000482399 Q6ZRP5 223 aa8.46□□□□□ -1.06
VPS52-218ENST00000482399 TENM4Q6N022 2769 aa8.45□□□□□ -1.06
VPS52-218ENST00000482399 SMIM26A0A096LP01 95 aa8.45□□□□□ -1.06
VPS52-218ENST00000482399 EGFEM1PQ0D2K5 195 aa8.45□□□□□ -1.06
VPS52-218ENST00000482399 IGKV2-24A0A0C4DH68 120 aa8.44□□□□□ -1.06
VPS52-218ENST00000482399 A0A0G2JQZ4 141 aa8.44□□□□□ -1.06
VPS52-218ENST00000482399 A0A1W2PNN7 141 aa8.44□□□□□ -1.06
VPS52-218ENST00000482399 A0A096LNI7 61 aa8.43□□□□□ -1.06
VPS52-218ENST00000482399 DEFB131BA0A096LNP1 70 aa8.43□□□□□ -1.06
VPS52-218ENST00000482399 TRBV7-4A0A0J9YYF1 115 aa8.42□□□□□ -1.06
VPS52-218ENST00000482399 H3BQ85 93 aa8.42□□□□□ -1.06
VPS52-218ENST00000482399 SMIM29Q86T20 159 aa8.42□□□□□ -1.06
VPS52-218ENST00000482399 ST20-AS1Q8NBB2 130 aa8.42□□□□□ -1.06
VPS52-218ENST00000482399 OTOGQ6ZRI0 2925 aa8.42□□□□□ -1.06
VPS52-218ENST00000482399 ESRGQ1W209 222 aa8.42□□□□□ -1.06
VPS52-218ENST00000482399 J3QKU1 62 aa8.42□□□□□ -1.06
VPS52-218ENST00000482399 PRYO14603 147 aa8.42□□□□□ -1.06
VPS52-218ENST00000482399 WIPF1O43516 503 aa8.42□□□□□ -1.06
VPS52-218ENST00000482399 KLKP1Q107X0 134 aa8.42□□□□□ -1.06
VPS52-218ENST00000482399 FAM168BA1KXE4 195 aa8.41□□□□□ -1.06
VPS52-218ENST00000482399 WFDC13Q8IUB5 93 aa8.41□□□□□ -1.06
VPS52-218ENST00000482399 PRR34Q9NV39 138 aa8.41□□□□□ -1.06
VPS52-218ENST00000482399 FBN1P35555 2871 aaKnown RBP8.41□□□□□ -1.06
VPS52-218ENST00000482399 TENM3Q9P273 2699 aa8.41□□□□□ -1.06
VPS52-218ENST00000482399 C7orf33Q8WU49 177 aa8.41□□□□□ -1.06
VPS52-218ENST00000482399 SEC61GP60059 68 aa8.41□□□□□ -1.06
VPS52-218ENST00000482399 C1orf137Q5JT78 98 aa8.41□□□□□ -1.06
VPS52-218ENST00000482399 SERTAD4-AS1Q5TG53 156 aa8.41□□□□□ -1.06
VPS52-218ENST00000482399 TRRAPQ9Y4A5 3859 aa8.4□□□□□ -1.07
VPS52-218ENST00000482399 NDUFC1O43677 76 aa8.39□□□□□ -1.07
VPS52-218ENST00000482399 LINC00528Q8N1L1 170 aa8.39□□□□□ -1.07
VPS52-218ENST00000482399 C11orf45Q8TAV5 145 aa8.38□□□□□ -1.07
VPS52-218ENST00000482399 C15orf56Q8N910 161 aa8.37□□□□□ -1.07
VPS52-218ENST00000482399 IGKV4-1P06312 121 aa8.36□□□□□ -1.07
VPS52-218ENST00000482399 GVQW2A0A096LPI5 108 aaPredicted RBP8.36□□□□□ -1.07
VPS52-218ENST00000482399 Q8N377 158 aa8.35□□□□□ -1.07
VPS52-218ENST00000482399 FP248Q71RG6 208 aaPredicted RBP8.35□□□□□ -1.07
VPS52-218ENST00000482399 PSPHP1O15172 72 aa8.34□□□□□ -1.07
VPS52-218ENST00000482399 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.34□□□□□ -1.07
VPS52-218ENST00000482399 PSCAO43653 123 aa8.34□□□□□ -1.07
VPS52-218ENST00000482399 PRO0628Q9UI54 55 aa8.34□□□□□ -1.07
VPS52-218ENST00000482399 V9GYY9 64 aa8.34□□□□□ -1.07
VPS52-218ENST00000482399 FAM229BQ4G0N7 80 aa8.33□□□□□ -1.08
VPS52-218ENST00000482399 PRLHP81277 87 aa8.32□□□□□ -1.08
VPS52-218ENST00000482399 BCE1O60756 84 aa8.32□□□□□ -1.08
VPS52-218ENST00000482399 CASC10Q5T4H9 136 aa8.31□□□□□ -1.08
VPS52-218ENST00000482399 C1orf195Q5TG92 126 aa8.31□□□□□ -1.08
VPS52-218ENST00000482399 K7EQZ3 153 aa8.3□□□□□ -1.08
VPS52-218ENST00000482399 DHRS4-AS1Q9P1J3 65 aa8.3□□□□□ -1.08
VPS52-218ENST00000482399 ERC2-IT1O76042 136 aa8.3□□□□□ -1.08
VPS52-218ENST00000482399 A0A087WSZ3 146 aa8.29□□□□□ -1.08
VPS52-218ENST00000482399 A0A1W2PNM2 257 aa8.29□□□□□ -1.08
VPS52-218ENST00000482399 ATP5EP56381 51 aaPredicted RBP8.28□□□□□ -1.08
VPS52-218ENST00000482399 Q6ZRX8 168 aa8.28□□□□□ -1.08
VPS52-218ENST00000482399 RPL37AP61513 92 aaKnown RBP8.27□□□□□ -1.09
VPS52-218ENST00000482399 LINC00208Q96KT6 92 aa8.27□□□□□ -1.09
VPS52-218ENST00000482399 OCR1Q9BZK8 76 aa8.27□□□□□ -1.09
VPS52-218ENST00000482399 MRPL55Q7Z7F7 128 aaKnown RBP8.26□□□□□ -1.09
VPS52-218ENST00000482399 F8WDY8 70 aa8.26□□□□□ -1.09
VPS52-218ENST00000482399 MP68P56378 58 aa8.26□□□□□ -1.09
VPS52-218ENST00000482399 EPM2AB3EWF7 344 aa8.25□□□□□ -1.09
VPS52-218ENST00000482399 Q9BRP9 147 aa8.25□□□□□ -1.09
VPS52-218ENST00000482399 Q8NBF4 154 aa8.25□□□□□ -1.09
VPS52-218ENST00000482399 KCNQ1DNQ9H478 68 aa8.25□□□□□ -1.09
VPS52-218ENST00000482399 H0Y9J4 135 aa8.24□□□□□ -1.09
VPS52-218ENST00000482399 STAB2Q8WWQ8 2551 aa8.24□□□□□ -1.09
VPS52-218ENST00000482399 UBE2AP49459 152 aa8.24□□□□□ -1.09
VPS52-218ENST00000482399 LINC01556Q5JQF7 62 aa8.24□□□□□ -1.09
VPS52-218ENST00000482399 UBE2DNLQ8IWF7 75 aa8.24□□□□□ -1.09
VPS52-218ENST00000482399 LINC00476Q8WZB0 136 aa8.23□□□□□ -1.09
VPS52-218ENST00000482399 KRTAP10-11P60412 298 aa8.22□□□□□ -1.09
VPS52-218ENST00000482399 REG3GQ6UW15 175 aa8.22□□□□□ -1.09
VPS52-218ENST00000482399 HCG22E2RYF7 251 aa8.21□□□□□ -1.1
VPS52-218ENST00000482399 C1orf64Q8NEQ6 169 aa8.21□□□□□ -1.1
VPS52-218ENST00000482399 KRTAP26-1Q6PEX3 210 aa8.2□□□□□ -1.1
VPS52-218ENST00000482399 IGLV1-50A0A075B6I6 118 aa8.19□□□□□ -1.1
VPS52-218ENST00000482399 SRRM2Q9UQ35 2752 aaKnown RBP8.19□□□□□ -1.1
VPS52-218ENST00000482399 LINC00588Q9Y4M8 146 aa8.19□□□□□ -1.1
VPS52-218ENST00000482399 NDUFS5O43920 106 aa8.18□□□□□ -1.1
VPS52-218ENST00000482399 IGLV5-48A0A075B6I7 105 aa8.17□□□□□ -1.1
VPS52-218ENST00000482399 DSCR10P59022 87 aa8.17□□□□□ -1.1
VPS52-218ENST00000482399 CHTF8P0CG12 524 aa8.17□□□□□ -1.1
VPS52-218ENST00000482399 SPTSSBQ8NFR3 76 aa8.17□□□□□ -1.1
VPS52-218ENST00000482399 KMT2BQ9UMN6 2715 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms