RNA–Protein interactions for RNA: ENST00000482395.1

TRA2A-206, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-206ENST00000482395 Q6ZRX8 168 aa12□□□□□ -0.49
TRA2A-206ENST00000482395 LINC00483Q53H64 154 aa11.99□□□□□ -0.49
TRA2A-206ENST00000482395 TRAV23DV6A0A075B6W5 121 aa11.98□□□□□ -0.49
TRA2A-206ENST00000482395 NPC2P61916 151 aa11.98□□□□□ -0.49
TRA2A-206ENST00000482395 JOSD1Q15040 202 aaPredicted RBP11.98□□□□□ -0.49
TRA2A-206ENST00000482395 SPANXCQ9NY87 97 aa11.98□□□□□ -0.49
TRA2A-206ENST00000482395 ZNF815PA8K554 130 aa11.96□□□□□ -0.49
TRA2A-206ENST00000482395 LITAFQ99732 161 aa11.96□□□□□ -0.49
TRA2A-206ENST00000482395 C20orf202A1L168 122 aa11.95□□□□□ -0.5
TRA2A-206ENST00000482395 AKR1D1P51857 326 aa11.95□□□□□ -0.5
TRA2A-206ENST00000482395 LINC00308Q8TCZ7 52 aa11.95□□□□□ -0.5
TRA2A-206ENST00000482395 ZNF73O43830 326 aaPredicted RBP11.94□□□□□ -0.5
TRA2A-206ENST00000482395 EIF4EBP3O60516 100 aaPredicted RBP11.94□□□□□ -0.5
TRA2A-206ENST00000482395 KRTDAPP60985 99 aa11.94□□□□□ -0.5
TRA2A-206ENST00000482395 RETNLBQ9BQ08 111 aa11.94□□□□□ -0.5
TRA2A-206ENST00000482395 Q9BRP9 147 aa11.94□□□□□ -0.5
TRA2A-206ENST00000482395 PPDPFQ9H3Y8 114 aa11.94□□□□□ -0.5
TRA2A-206ENST00000482395 HINT1P49773 126 aaPredicted RBP11.93□□□□□ -0.5
TRA2A-206ENST00000482395 GAGE2AQ6NT46 116 aa11.93□□□□□ -0.5
TRA2A-206ENST00000482395 ERC2-IT1O76042 136 aa11.91□□□□□ -0.5
TRA2A-206ENST00000482395 TPRXLQ17RH7 258 aa11.91□□□□□ -0.5
TRA2A-206ENST00000482395 Q8NBF4 154 aa11.91□□□□□ -0.5
TRA2A-206ENST00000482395 C5orf52A6NGY3 159 aa11.9□□□□□ -0.5
TRA2A-206ENST00000482395 LINC00518Q8N0U6 118 aa11.89□□□□□ -0.51
TRA2A-206ENST00000482395 COPS9Q8WXC6 57 aa11.89□□□□□ -0.51
TRA2A-206ENST00000482395 SPANXDQ9BXN6 97 aa11.89□□□□□ -0.51
TRA2A-206ENST00000482395 IGLV7-46A0A075B6I9 117 aa11.88□□□□□ -0.51
TRA2A-206ENST00000482395 SPINK1P00995 79 aa11.88□□□□□ -0.51
TRA2A-206ENST00000482395 SSBP3-AS1Q7Z2R9 100 aa11.88□□□□□ -0.51
TRA2A-206ENST00000482395 OR13C6PQ8NH95 151 aa11.88□□□□□ -0.51
TRA2A-206ENST00000482395 SCGB1D4Q6XE38 83 aa11.87□□□□□ -0.51
TRA2A-206ENST00000482395 TTTY13Q9BZ97 58 aa11.87□□□□□ -0.51
TRA2A-206ENST00000482395 FP248Q71RG6 208 aaPredicted RBP11.86□□□□□ -0.51
TRA2A-206ENST00000482395 RPS29P62273 56 aaKnown RBP11.85□□□□□ -0.51
TRA2A-206ENST00000482395 IGLV9-49A0A0B4J1Y8 123 aa11.84□□□□□ -0.51
TRA2A-206ENST00000482395 MOBPQ13875 183 aa11.84□□□□□ -0.51
TRA2A-206ENST00000482395 ANKRD39Q53RE8 183 aa11.83□□□□□ -0.52
TRA2A-206ENST00000482395 Q6ZVH6 145 aa11.83□□□□□ -0.52
TRA2A-206ENST00000482395 CDIP1Q9H305 208 aa11.83□□□□□ -0.52
TRA2A-206ENST00000482395 IFITM1P13164 125 aa11.82□□□□□ -0.52
TRA2A-206ENST00000482395 SNRPEP62304 92 aaKnown RBP11.82□□□□□ -0.52
TRA2A-206ENST00000482395 DHRS4-AS1Q9P1J3 65 aa11.82□□□□□ -0.52
TRA2A-206ENST00000482395 LCE2BO14633 110 aa11.8□□□□□ -0.52
TRA2A-206ENST00000482395 S100A1P23297 94 aa11.79□□□□□ -0.52
TRA2A-206ENST00000482395 SLC25A34Q6PIV7 304 aa11.79□□□□□ -0.52
TRA2A-206ENST00000482395 ATOH7Q8N100 152 aa11.79□□□□□ -0.52
TRA2A-206ENST00000482395 A0A0U1RQV1 116 aa11.77□□□□□ -0.53
TRA2A-206ENST00000482395 ELOF1P60002 83 aaKnown RBP11.77□□□□□ -0.53
TRA2A-206ENST00000482395 C9orf153Q5TBE3 101 aa11.77□□□□□ -0.53
TRA2A-206ENST00000482395 SPRR1BP22528 89 aa11.76□□□□□ -0.53
TRA2A-206ENST00000482395 COX7BP24311 80 aa11.76□□□□□ -0.53
TRA2A-206ENST00000482395 S100A2P29034 98 aa11.76□□□□□ -0.53
TRA2A-206ENST00000482395 ST20-AS1Q8NBB2 130 aa11.76□□□□□ -0.53
TRA2A-206ENST00000482395 TRBV7-6A0A0J9YX20 115 aa11.75□□□□□ -0.53
TRA2A-206ENST00000482395 C6orf99Q4VX62 202 aa11.75□□□□□ -0.53
TRA2A-206ENST00000482395 HIST3H2BBQ8N257 126 aa11.75□□□□□ -0.53
TRA2A-206ENST00000482395 KRTAP9-2Q9BYQ4 174 aa11.75□□□□□ -0.53
TRA2A-206ENST00000482395 PCP2Q8IVA1 136 aa11.74□□□□□ -0.53
TRA2A-206ENST00000482395 KRTAP9-6A0A140TA67 174 aa11.72□□□□□ -0.53
TRA2A-206ENST00000482395 SLC25A20O43772 301 aa11.72□□□□□ -0.53
TRA2A-206ENST00000482395 Q8N377 158 aa11.72□□□□□ -0.53
TRA2A-206ENST00000482395 HIST1H2BLQ99880 126 aa11.72□□□□□ -0.53
TRA2A-206ENST00000482395 MUC2Q02817 5179 aa11.72□□□□□ -0.53
TRA2A-206ENST00000482395 A0A1B0GWB2 263 aa11.71□□□□□ -0.53
TRA2A-206ENST00000482395 MUSTN1Q8IVN3 82 aa11.71□□□□□ -0.53
TRA2A-206ENST00000482395 A6NDN8 102 aa11.7□□□□□ -0.54
TRA2A-206ENST00000482395 HSBP1L1C9JCN9 74 aa11.7□□□□□ -0.54
TRA2A-206ENST00000482395 S100A6P06703 90 aa11.7□□□□□ -0.54
TRA2A-206ENST00000482395 LAMTOR3Q9UHA4 124 aa11.7□□□□□ -0.54
TRA2A-206ENST00000482395 MUC17Q685J3 4493 aa11.69□□□□□ -0.54
TRA2A-206ENST00000482395 TRAV13-2A0A0B4J235 113 aa11.68□□□□□ -0.54
TRA2A-206ENST00000482395 KRTAP13-3Q3SY46 172 aa11.68□□□□□ -0.54
TRA2A-206ENST00000482395 A4D1N5 150 aa11.67□□□□□ -0.54
TRA2A-206ENST00000482395 TAL2Q16559 108 aa11.66□□□□□ -0.54
TRA2A-206ENST00000482395 TEX49A0A1B0GTD5 131 aa11.64□□□□□ -0.55
TRA2A-206ENST00000482395 LIMD2Q9BT23 127 aa11.64□□□□□ -0.55
TRA2A-206ENST00000482395 NHP2Q9NX24 153 aaKnown RBP11.63□□□□□ -0.55
TRA2A-206ENST00000482395 DEFB105AQ8NG35 78 aa11.6□□□□□ -0.55
TRA2A-206ENST00000482395 IGLV5-48A0A075B6I7 105 aa11.59□□□□□ -0.55
TRA2A-206ENST00000482395 CD164Q04900 197 aa11.58□□□□□ -0.56
TRA2A-206ENST00000482395 SMIM11BQ8TCY0 68 aa11.58□□□□□ -0.56
TRA2A-206ENST00000482395 PRO1933Q9H354 126 aa11.58□□□□□ -0.56
TRA2A-206ENST00000482395 Q1RN00 199 aa11.57□□□□□ -0.56
TRA2A-206ENST00000482395 VAMP3Q15836 100 aa11.56□□□□□ -0.56
TRA2A-206ENST00000482395 LINC01547P58512 204 aaPredicted RBP11.55□□□□□ -0.56
TRA2A-206ENST00000482395 ASB16-AS1Q495Z4 193 aa11.55□□□□□ -0.56
TRA2A-206ENST00000482395 SCGB1D1O95968 90 aa11.54□□□□□ -0.56
TRA2A-206ENST00000482395 SMIM29Q86T20 159 aa11.54□□□□□ -0.56
TRA2A-206ENST00000482395 HRCT1Q6UXD1 115 aa11.53□□□□□ -0.56
TRA2A-206ENST00000482395 SEC61BP60468 96 aaKnown RBP11.52□□□□□ -0.57
TRA2A-206ENST00000482395 H7C2G1 150 aa11.51□□□□□ -0.57
TRA2A-206ENST00000482395 COX8AP10176 69 aa11.49□□□□□ -0.57
TRA2A-206ENST00000482395 DLEU1O43261 78 aa11.48□□□□□ -0.57
TRA2A-206ENST00000482395 XP32Q5T750 250 aa11.48□□□□□ -0.57
TRA2A-206ENST00000482395 Q5XG85 94 aa11.48□□□□□ -0.57
TRA2A-206ENST00000482395 HIST1H4GQ99525 98 aa11.48□□□□□ -0.57
TRA2A-206ENST00000482395 LINC00575Q6W349 94 aa11.46□□□□□ -0.57
TRA2A-206ENST00000482395 hADV29S1A0JD25 119 aa11.44□□□□□ -0.58
TRA2A-206ENST00000482395 F8WEM9 126 aa11.44□□□□□ -0.58
TRA2A-206ENST00000482395 BVES-AS1Q5T3Y7 98 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms