RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 B5MCH6 92 aa6.93□□□□□ -1.3
HMGN1-213ENST00000482192 EIF4EBP3O60516 100 aaPredicted RBP6.93□□□□□ -1.3
HMGN1-213ENST00000482192 SMCR5Q8TEV8 140 aa6.93□□□□□ -1.3
HMGN1-213ENST00000482192 LITAFQ99732 161 aa6.93□□□□□ -1.3
HMGN1-213ENST00000482192 TRAV23DV6A0A075B6W5 121 aa6.92□□□□□ -1.3
HMGN1-213ENST00000482192 Q6ZRX8 168 aa6.92□□□□□ -1.3
HMGN1-213ENST00000482192 LRP2P98164 4655 aa6.91□□□□□ -1.3
HMGN1-213ENST00000482192 CTAG1AP78358 180 aa6.91□□□□□ -1.3
HMGN1-213ENST00000482192 C3orf22Q8N5N4 141 aa6.91□□□□□ -1.3
HMGN1-213ENST00000482192 LINC00308Q8TCZ7 52 aa6.91□□□□□ -1.3
HMGN1-213ENST00000482192 SPANXCQ9NY87 97 aa6.91□□□□□ -1.3
HMGN1-213ENST00000482192 CBY1Q9Y3M2 126 aa6.91□□□□□ -1.3
HMGN1-213ENST00000482192 S100A1P23297 94 aa6.9□□□□□ -1.3
HMGN1-213ENST00000482192 AKR1D1P51857 326 aa6.9□□□□□ -1.3
HMGN1-213ENST00000482192 TTTY13Q9BZ97 58 aa6.9□□□□□ -1.3
HMGN1-213ENST00000482192 ZNF73O43830 326 aaPredicted RBP6.89□□□□□ -1.31
HMGN1-213ENST00000482192 JOSD1Q15040 202 aaPredicted RBP6.89□□□□□ -1.31
HMGN1-213ENST00000482192 LINC00483Q53H64 154 aa6.89□□□□□ -1.31
HMGN1-213ENST00000482192 Q9BRP9 147 aa6.89□□□□□ -1.31
HMGN1-213ENST00000482192 SPAG11AQ6PDA7 123 aa6.88□□□□□ -1.31
HMGN1-213ENST00000482192 SCGB1D4Q6XE38 83 aa6.88□□□□□ -1.31
HMGN1-213ENST00000482192 PPDPFQ9H3Y8 114 aa6.88□□□□□ -1.31
HMGN1-213ENST00000482192 ERC2-IT1O76042 136 aa6.87□□□□□ -1.31
HMGN1-213ENST00000482192 ANKRD39Q53RE8 183 aa6.87□□□□□ -1.31
HMGN1-213ENST00000482192 GAGE2AQ6NT46 116 aa6.87□□□□□ -1.31
HMGN1-213ENST00000482192 ATOH7Q8N100 152 aa6.87□□□□□ -1.31
HMGN1-213ENST00000482192 SPANXDQ9BXN6 97 aa6.87□□□□□ -1.31
HMGN1-213ENST00000482192 HINT1P49773 126 aaPredicted RBP6.86□□□□□ -1.31
HMGN1-213ENST00000482192 OR13C6PQ8NH95 151 aa6.86□□□□□ -1.31
HMGN1-213ENST00000482192 RETNLBQ9BQ08 111 aa6.86□□□□□ -1.31
HMGN1-213ENST00000482192 S100A2P29034 98 aa6.85□□□□□ -1.31
HMGN1-213ENST00000482192 SNRPEP62304 92 aaKnown RBP6.85□□□□□ -1.31
HMGN1-213ENST00000482192 LINC00518Q8N0U6 118 aa6.85□□□□□ -1.31
HMGN1-213ENST00000482192 Q8NBF4 154 aa6.85□□□□□ -1.31
HMGN1-213ENST00000482192 COPS9Q8WXC6 57 aa6.85□□□□□ -1.31
HMGN1-213ENST00000482192 HIST3H2BBQ8N257 126 aa6.84□□□□□ -1.31
HMGN1-213ENST00000482192 HIST1H2BLQ99880 126 aa6.84□□□□□ -1.31
HMGN1-213ENST00000482192 Q6ZVH6 145 aa6.83□□□□□ -1.32
HMGN1-213ENST00000482192 PCP2Q8IVA1 136 aa6.83□□□□□ -1.32
HMGN1-213ENST00000482192 IGLV9-49A0A0B4J1Y8 123 aa6.82□□□□□ -1.32
HMGN1-213ENST00000482192 C5orf52A6NGY3 159 aa6.82□□□□□ -1.32
HMGN1-213ENST00000482192 S100A6P06703 90 aa6.82□□□□□ -1.32
HMGN1-213ENST00000482192 IFITM1P13164 125 aa6.82□□□□□ -1.32
HMGN1-213ENST00000482192 MOBPQ13875 183 aa6.82□□□□□ -1.32
HMGN1-213ENST00000482192 LPAP08519 4548 aa6.81□□□□□ -1.32
HMGN1-213ENST00000482192 SPINK1P00995 79 aa6.81□□□□□ -1.32
HMGN1-213ENST00000482192 DHRS4-AS1Q9P1J3 65 aa6.81□□□□□ -1.32
HMGN1-213ENST00000482192 IGLV7-46A0A075B6I9 117 aa6.8□□□□□ -1.32
HMGN1-213ENST00000482192 HSBP1L1C9JCN9 74 aa6.8□□□□□ -1.32
HMGN1-213ENST00000482192 SSBP3-AS1Q7Z2R9 100 aa6.8□□□□□ -1.32
HMGN1-213ENST00000482192 ST20-AS1Q8NBB2 130 aa6.8□□□□□ -1.32
HMGN1-213ENST00000482192 COX7BP24311 80 aa6.79□□□□□ -1.32
HMGN1-213ENST00000482192 ELOF1P60002 83 aaKnown RBP6.79□□□□□ -1.32
HMGN1-213ENST00000482192 TPRXLQ17RH7 258 aa6.79□□□□□ -1.32
HMGN1-213ENST00000482192 C6orf99Q4VX62 202 aa6.79□□□□□ -1.32
HMGN1-213ENST00000482192 A6NDN8 102 aa6.78□□□□□ -1.32
HMGN1-213ENST00000482192 C9orf153Q5TBE3 101 aa6.78□□□□□ -1.32
HMGN1-213ENST00000482192 FP248Q71RG6 208 aaPredicted RBP6.78□□□□□ -1.32
HMGN1-213ENST00000482192 MUSTN1Q8IVN3 82 aa6.78□□□□□ -1.32
HMGN1-213ENST00000482192 RNF213Q63HN8 5207 aa6.77□□□□□ -1.33
HMGN1-213ENST00000482192 TRBV7-6A0A0J9YX20 115 aa6.77□□□□□ -1.33
HMGN1-213ENST00000482192 RPS29P62273 56 aaKnown RBP6.77□□□□□ -1.33
HMGN1-213ENST00000482192 SLC25A34Q6PIV7 304 aa6.77□□□□□ -1.33
HMGN1-213ENST00000482192 CDIP1Q9H305 208 aa6.77□□□□□ -1.33
HMGN1-213ENST00000482192 SPRR1BP22528 89 aa6.76□□□□□ -1.33
HMGN1-213ENST00000482192 XP32Q5T750 250 aa6.76□□□□□ -1.33
HMGN1-213ENST00000482192 A0A1B0GWB2 263 aa6.75□□□□□ -1.33
HMGN1-213ENST00000482192 TRAV13-2A0A0B4J235 113 aa6.74□□□□□ -1.33
HMGN1-213ENST00000482192 SCGB1D1O95968 90 aa6.73□□□□□ -1.33
HMGN1-213ENST00000482192 Q8N377 158 aa6.73□□□□□ -1.33
HMGN1-213ENST00000482192 LAMTOR3Q9UHA4 124 aa6.73□□□□□ -1.33
HMGN1-213ENST00000482192 A4D1N5 150 aa6.72□□□□□ -1.33
HMGN1-213ENST00000482192 SLC25A20O43772 301 aa6.72□□□□□ -1.33
HMGN1-213ENST00000482192 TEX49A0A1B0GTD5 131 aa6.71□□□□□ -1.34
HMGN1-213ENST00000482192 TAL2Q16559 108 aa6.71□□□□□ -1.34
HMGN1-213ENST00000482192 DEFB105AQ8NG35 78 aa6.71□□□□□ -1.34
HMGN1-213ENST00000482192 SMIM11BQ8TCY0 68 aa6.7□□□□□ -1.34
HMGN1-213ENST00000482192 NHP2Q9NX24 153 aaKnown RBP6.7□□□□□ -1.34
HMGN1-213ENST00000482192 Q1RN00 199 aa6.69□□□□□ -1.34
HMGN1-213ENST00000482192 KRTAP13-3Q3SY46 172 aa6.69□□□□□ -1.34
HMGN1-213ENST00000482192 IGLV5-48A0A075B6I7 105 aa6.68□□□□□ -1.34
HMGN1-213ENST00000482192 COX8AP10176 69 aa6.68□□□□□ -1.34
HMGN1-213ENST00000482192 A0A0U1RQV1 116 aa6.67□□□□□ -1.34
HMGN1-213ENST00000482192 VAMP3Q15836 100 aa6.67□□□□□ -1.34
HMGN1-213ENST00000482192 LIMD2Q9BT23 127 aa6.67□□□□□ -1.34
HMGN1-213ENST00000482192 A6NJY4 79 aa6.66□□□□□ -1.34
HMGN1-213ENST00000482192 DLEU1O43261 78 aa6.66□□□□□ -1.34
HMGN1-213ENST00000482192 HIST1H4GQ99525 98 aa6.66□□□□□ -1.34
HMGN1-213ENST00000482192 PRO1933Q9H354 126 aa6.66□□□□□ -1.34
HMGN1-213ENST00000482192 LINC01547P58512 204 aaPredicted RBP6.65□□□□□ -1.34
HMGN1-213ENST00000482192 HRCT1Q6UXD1 115 aa6.65□□□□□ -1.34
HMGN1-213ENST00000482192 SMIM29Q86T20 159 aa6.65□□□□□ -1.34
HMGN1-213ENST00000482192 KRTAP4-8Q9BYQ9 185 aa6.65□□□□□ -1.34
HMGN1-213ENST00000482192 CD164Q04900 197 aa6.64□□□□□ -1.35
HMGN1-213ENST00000482192 LINC00575Q6W349 94 aa6.63□□□□□ -1.35
HMGN1-213ENST00000482192 C12orf57Q99622 126 aa6.63□□□□□ -1.35
HMGN1-213ENST00000482192 PAM16Q9Y3D7 125 aa6.63□□□□□ -1.35
HMGN1-213ENST00000482192 H7C2G1 150 aa6.62□□□□□ -1.35
HMGN1-213ENST00000482192 SPATA45Q537H7 98 aa6.62□□□□□ -1.35
HMGN1-213ENST00000482192 C14orf144Q96I85 54 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms