RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 HERV-K104P63124 156 aa3.66□□□□□ -1.82
LRCH3-216ENST00000481048 S100A12P80511 92 aa3.66□□□□□ -1.82
LRCH3-216ENST00000481048 Q8NDZ9 215 aa3.66□□□□□ -1.82
LRCH3-216ENST00000481048 KRTAP4-3Q9BYR4 195 aa3.66□□□□□ -1.82
LRCH3-216ENST00000481048 RPS10P5Q9NQ39 176 aa3.66□□□□□ -1.82
LRCH3-216ENST00000481048 TMEM223A0PJW6 202 aa3.65□□□□□ -1.83
LRCH3-216ENST00000481048 ASB16-AS1Q495Z4 193 aa3.65□□□□□ -1.83
LRCH3-216ENST00000481048 SSBP3-AS1Q7Z2R9 100 aa3.65□□□□□ -1.83
LRCH3-216ENST00000481048 CHTOPQ9Y3Y2 248 aaKnown RBP3.65□□□□□ -1.83
LRCH3-216ENST00000481048 MUC17Q685J3 4493 aa3.64□□□□□ -1.83
LRCH3-216ENST00000481048 LOC107984156A0A0G2JMH3 177 aa3.64□□□□□ -1.83
LRCH3-216ENST00000481048 ETDCA0A1B0GVM5 59 aa3.64□□□□□ -1.83
LRCH3-216ENST00000481048 KRTAP4-16G5E9R7 235 aaPredicted RBP3.64□□□□□ -1.83
LRCH3-216ENST00000481048 KRTAP13-3Q3SY46 172 aa3.64□□□□□ -1.83
LRCH3-216ENST00000481048 LINC00483Q53H64 154 aa3.64□□□□□ -1.83
LRCH3-216ENST00000481048 ARL17AQ8IVW1 177 aa3.64□□□□□ -1.83
LRCH3-216ENST00000481048 BOD1L2Q8IYS8 172 aa3.64□□□□□ -1.83
LRCH3-216ENST00000481048 FAM19A2Q8N3H0 131 aa3.64□□□□□ -1.83
LRCH3-216ENST00000481048 SMCR5Q8TEV8 140 aa3.64□□□□□ -1.83
LRCH3-216ENST00000481048 IFI27L1Q96BM0 104 aa3.64□□□□□ -1.83
LRCH3-216ENST00000481048 CHCHD1Q96BP2 118 aaKnown RBP3.64□□□□□ -1.83
LRCH3-216ENST00000481048 LITAFQ99732 161 aa3.64□□□□□ -1.83
LRCH3-216ENST00000481048 MAP1LC3CQ9BXW4 147 aa3.64□□□□□ -1.83
LRCH3-216ENST00000481048 NDUFA12Q9UI09 145 aa3.64□□□□□ -1.83
LRCH3-216ENST00000481048 MYMXA0A1B0GTQ4 84 aa3.63□□□□□ -1.83
LRCH3-216ENST00000481048 SMIM13P0DJ93 91 aa3.63□□□□□ -1.83
LRCH3-216ENST00000481048 SEC61BP60468 96 aaKnown RBP3.63□□□□□ -1.83
LRCH3-216ENST00000481048 IFITM2Q01629 132 aa3.63□□□□□ -1.83
LRCH3-216ENST00000481048 PMCHL1Q16048 86 aa3.63□□□□□ -1.83
LRCH3-216ENST00000481048 MEIG1Q5JSS6 88 aa3.63□□□□□ -1.83
LRCH3-216ENST00000481048 COMMD7Q86VX2 200 aa3.63□□□□□ -1.83
LRCH3-216ENST00000481048 Q8NBF4 154 aa3.63□□□□□ -1.83
LRCH3-216ENST00000481048 TRBV10-2A0A0K0K1G8 114 aa3.62□□□□□ -1.83
LRCH3-216ENST00000481048 A0A0U1RRA0 63 aa3.62□□□□□ -1.83
LRCH3-216ENST00000481048 MIR7-3HGQ8N6C7 128 aa3.62□□□□□ -1.83
LRCH3-216ENST00000481048 DAND5Q8N907 189 aa3.62□□□□□ -1.83
LRCH3-216ENST00000481048 TRBV10-3A0A0K0K1G6 114 aa3.61□□□□□ -1.83
LRCH3-216ENST00000481048 C5orf52A6NGY3 159 aa3.61□□□□□ -1.83
LRCH3-216ENST00000481048 SLC25A20O43772 301 aa3.61□□□□□ -1.83
LRCH3-216ENST00000481048 SNAPINO95295 136 aa3.61□□□□□ -1.83
LRCH3-216ENST00000481048 NCR3O14931 201 aa3.6□□□□□ -1.83
LRCH3-216ENST00000481048 DDTP30046 118 aa3.6□□□□□ -1.83
LRCH3-216ENST00000481048 JOSD1Q15040 202 aaPredicted RBP3.6□□□□□ -1.83
LRCH3-216ENST00000481048 NDUFA5Q16718 116 aa3.6□□□□□ -1.83
LRCH3-216ENST00000481048 GAGE2AQ6NT46 116 aa3.6□□□□□ -1.83
LRCH3-216ENST00000481048 Q6ZRX8 168 aa3.6□□□□□ -1.83
LRCH3-216ENST00000481048 SVBPQ8N300 66 aa3.6□□□□□ -1.83
LRCH3-216ENST00000481048 Q8N377 158 aa3.6□□□□□ -1.83
LRCH3-216ENST00000481048 CBY1Q9Y3M2 126 aa3.6□□□□□ -1.83
LRCH3-216ENST00000481048 LEPROTO15243 131 aa3.59□□□□□ -1.83
LRCH3-216ENST00000481048 HSBP1O75506 76 aa3.59□□□□□ -1.83
LRCH3-216ENST00000481048 NDUFC2O95298 119 aa3.59□□□□□ -1.83
LRCH3-216ENST00000481048 APOC3P02656 99 aa3.59□□□□□ -1.83
LRCH3-216ENST00000481048 NMUP48645 174 aa3.59□□□□□ -1.83
LRCH3-216ENST00000481048 SPANXB1Q9NS25 103 aaPredicted RBP3.59□□□□□ -1.83
LRCH3-216ENST00000481048 IGLV9-49A0A0B4J1Y8 123 aa3.58□□□□□ -1.84
LRCH3-216ENST00000481048 IGLV6-57P01721 117 aa3.58□□□□□ -1.84
LRCH3-216ENST00000481048 PLNP26678 52 aa3.58□□□□□ -1.84
LRCH3-216ENST00000481048 HINT1P49773 126 aaPredicted RBP3.58□□□□□ -1.84
LRCH3-216ENST00000481048 MOBPQ13875 183 aa3.58□□□□□ -1.84
LRCH3-216ENST00000481048 Q9BRP9 147 aa3.58□□□□□ -1.84
LRCH3-216ENST00000481048 MIEN1Q9BRT3 115 aa3.58□□□□□ -1.84
LRCH3-216ENST00000481048 J3QQQ9 107 aa3.57□□□□□ -1.84
LRCH3-216ENST00000481048 ERC2-IT1O76042 136 aa3.57□□□□□ -1.84
LRCH3-216ENST00000481048 LEPROTL1O95214 131 aa3.57□□□□□ -1.84
LRCH3-216ENST00000481048 HERVK_113P61574 105 aa3.57□□□□□ -1.84
LRCH3-216ENST00000481048 S100A7L2Q5SY68 101 aa3.57□□□□□ -1.84
LRCH3-216ENST00000481048 SLC25A34Q6PIV7 304 aa3.57□□□□□ -1.84
LRCH3-216ENST00000481048 YPEL4Q96NS1 127 aa3.57□□□□□ -1.84
LRCH3-216ENST00000481048 S100A1P23297 94 aa3.56□□□□□ -1.84
LRCH3-216ENST00000481048 KRTAP4-1Q9BYQ7 146 aa3.56□□□□□ -1.84
LRCH3-216ENST00000481048 HSPB8Q9UJY1 196 aa3.56□□□□□ -1.84
LRCH3-216ENST00000481048 TRAV23DV6A0A075B6W5 121 aa3.55□□□□□ -1.84
LRCH3-216ENST00000481048 ZNF73O43830 326 aaPredicted RBP3.55□□□□□ -1.84
LRCH3-216ENST00000481048 DPM2O94777 84 aa3.55□□□□□ -1.84
LRCH3-216ENST00000481048 IGKCP01834 107 aa3.55□□□□□ -1.84
LRCH3-216ENST00000481048 LGALS3P17931 250 aaKnown RBP3.55□□□□□ -1.84
LRCH3-216ENST00000481048 TSPEAR-AS2P59090 65 aa3.55□□□□□ -1.84
LRCH3-216ENST00000481048 C9orf153Q5TBE3 101 aa3.55□□□□□ -1.84
LRCH3-216ENST00000481048 H0Y8G0 127 aa3.54□□□□□ -1.84
LRCH3-216ENST00000481048 SPRR1BP22528 89 aa3.54□□□□□ -1.84
LRCH3-216ENST00000481048 LCE3AQ5TA76 89 aa3.54□□□□□ -1.84
LRCH3-216ENST00000481048 LIMD2Q9BT23 127 aa3.54□□□□□ -1.84
LRCH3-216ENST00000481048 DHRS4-AS1Q9P1J3 65 aa3.54□□□□□ -1.84
LRCH3-216ENST00000481048 E9PLD3 99 aa3.53□□□□□ -1.84
LRCH3-216ENST00000481048 SERF1AO75920 110 aa3.53□□□□□ -1.84
LRCH3-216ENST00000481048 TRGC2P03986 189 aa3.53□□□□□ -1.84
LRCH3-216ENST00000481048 A0A0J9YXY3 114 aa3.52□□□□□ -1.85
LRCH3-216ENST00000481048 TIMM17BO60830 172 aa3.52□□□□□ -1.85
LRCH3-216ENST00000481048 CD164Q04900 197 aa3.52□□□□□ -1.85
LRCH3-216ENST00000481048 SOSTDC1Q6X4U4 206 aa3.52□□□□□ -1.85
LRCH3-216ENST00000481048 SPANXCQ9NY87 97 aa3.52□□□□□ -1.85
LRCH3-216ENST00000481048 LAMTOR3Q9UHA4 124 aa3.52□□□□□ -1.85
LRCH3-216ENST00000481048 FABP4P15090 132 aa3.51□□□□□ -1.85
LRCH3-216ENST00000481048 DSCR10P59022 87 aa3.51□□□□□ -1.85
LRCH3-216ENST00000481048 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
LRCH3-216ENST00000481048 ADAMTSL4-AS1Q5T5F5 129 aa3.51□□□□□ -1.85
LRCH3-216ENST00000481048 Q5XG85 94 aa3.51□□□□□ -1.85
LRCH3-216ENST00000481048 LINC00518Q8N0U6 118 aa3.51□□□□□ -1.85
LRCH3-216ENST00000481048 ST20-AS1Q8NBB2 130 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms