RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 LINC01600Q96MT4 127 aa10.75□□□□□ -0.69
PTPN7-209ENST00000477554 TRAV13-2A0A0B4J235 113 aa10.75□□□□□ -0.69
PTPN7-209ENST00000477554 LBHQ53QV2 105 aaPredicted RBP10.75□□□□□ -0.69
PTPN7-209ENST00000477554 MRPL55Q7Z7F7 128 aaKnown RBP10.75□□□□□ -0.69
PTPN7-209ENST00000477554 CFC1BP0CG36 223 aa10.74□□□□□ -0.69
PTPN7-209ENST00000477554 CFC1P0CG37 223 aa10.74□□□□□ -0.69
PTPN7-209ENST00000477554 A0A0B4J2C4 111 aa10.73□□□□□ -0.69
PTPN7-209ENST00000477554 IGLV7-43P04211 117 aa10.73□□□□□ -0.69
PTPN7-209ENST00000477554 S100A7L2Q5SY68 101 aa10.73□□□□□ -0.69
PTPN7-209ENST00000477554 RAB37Q96AX2 223 aa10.73□□□□□ -0.69
PTPN7-209ENST00000477554 NHP2Q9NX24 153 aaKnown RBP10.73□□□□□ -0.69
PTPN7-209ENST00000477554 A6NDN8 102 aa10.72□□□□□ -0.69
PTPN7-209ENST00000477554 UBE2BP63146 152 aa10.72□□□□□ -0.69
PTPN7-209ENST00000477554 OR13C6PQ8NH95 151 aa10.72□□□□□ -0.69
PTPN7-209ENST00000477554 TMEM126AQ9H061 195 aa10.72□□□□□ -0.69
PTPN7-209ENST00000477554 LINC00337Q8N6G1 96 aa10.71□□□□□ -0.69
PTPN7-209ENST00000477554 LINC00167Q96N53 147 aa10.71□□□□□ -0.69
PTPN7-209ENST00000477554 CBY1Q9Y3M2 126 aa10.71□□□□□ -0.69
PTPN7-209ENST00000477554 KRTAP10-8P60410 259 aa10.7□□□□□ -0.7
PTPN7-209ENST00000477554 A0A1B0GWB2 263 aa10.69□□□□□ -0.7
PTPN7-209ENST00000477554 GAGE10A6NGK3 116 aa10.69□□□□□ -0.7
PTPN7-209ENST00000477554 IGLV6-57P01721 117 aa10.69□□□□□ -0.7
PTPN7-209ENST00000477554 BATFQ16520 125 aa10.69□□□□□ -0.7
PTPN7-209ENST00000477554 PRO1854Q9UHT4 67 aa10.68□□□□□ -0.7
PTPN7-209ENST00000477554 UBR4Q5T4S7 5183 aa10.68□□□□□ -0.7
PTPN7-209ENST00000477554 IGLV1-50A0A075B6I6 118 aa10.67□□□□□ -0.7
PTPN7-209ENST00000477554 TRBV10-3A0A0K0K1G6 114 aa10.67□□□□□ -0.7
PTPN7-209ENST00000477554 RPL37AP8A6NKH3 93 aa10.67□□□□□ -0.7
PTPN7-209ENST00000477554 RPL13AP40429 203 aaKnown RBP10.67□□□□□ -0.7
PTPN7-209ENST00000477554 REG3GQ6UW15 175 aa10.66□□□□□ -0.7
PTPN7-209ENST00000477554 SNHG12Q9BXW3 62 aa10.65□□□□□ -0.7
PTPN7-209ENST00000477554 K7ERJ3 54 aa10.64□□□□□ -0.71
PTPN7-209ENST00000477554 KCNQ1DNQ9H478 68 aa10.64□□□□□ -0.71
PTPN7-209ENST00000477554 TRAV23DV6A0A075B6W5 121 aa10.63□□□□□ -0.71
PTPN7-209ENST00000477554 H0Y9J4 135 aa10.63□□□□□ -0.71
PTPN7-209ENST00000477554 PRYO14603 147 aa10.63□□□□□ -0.71
PTPN7-209ENST00000477554 KRTAP1-4P0C5Y4 121 aa10.63□□□□□ -0.71
PTPN7-209ENST00000477554 PRR26Q8N8Z3 221 aa10.62□□□□□ -0.71
PTPN7-209ENST00000477554 H7C2G1 150 aa10.61□□□□□ -0.71
PTPN7-209ENST00000477554 Q1RN00 199 aa10.61□□□□□ -0.71
PTPN7-209ENST00000477554 SMIM11BQ8TCY0 68 aa10.6□□□□□ -0.71
PTPN7-209ENST00000477554 DIRC1Q969H9 104 aa10.6□□□□□ -0.71
PTPN7-209ENST00000477554 ZNF73O43830 326 aaPredicted RBP10.58□□□□□ -0.72
PTPN7-209ENST00000477554 RPL28P46779 137 aaKnown RBP10.58□□□□□ -0.72
PTPN7-209ENST00000477554 COL5A1-AS1Q5SY13 56 aa10.58□□□□□ -0.72
PTPN7-209ENST00000477554 LRP2P98164 4655 aa10.57□□□□□ -0.72
PTPN7-209ENST00000477554 ZNF861PO60384 105 aa10.57□□□□□ -0.72
PTPN7-209ENST00000477554 TSPAN13O95857 204 aa10.57□□□□□ -0.72
PTPN7-209ENST00000477554 SPRR1AP35321 89 aa10.57□□□□□ -0.72
PTPN7-209ENST00000477554 VAMP3Q15836 100 aa10.56□□□□□ -0.72
PTPN7-209ENST00000477554 C6orf99Q4VX62 202 aa10.56□□□□□ -0.72
PTPN7-209ENST00000477554 ETDCA0A1B0GVM5 59 aa10.55□□□□□ -0.72
PTPN7-209ENST00000477554 BCE1O60756 84 aa10.55□□□□□ -0.72
PTPN7-209ENST00000477554 PSMB2P49721 201 aa10.55□□□□□ -0.72
PTPN7-209ENST00000477554 TRBV7-6A0A0J9YX20 115 aa10.54□□□□□ -0.72
PTPN7-209ENST00000477554 COX6CP09669 75 aa10.53□□□□□ -0.72
PTPN7-209ENST00000477554 KRTAP13-1Q8IUC0 172 aa10.53□□□□□ -0.72
PTPN7-209ENST00000477554 LPAP08519 4548 aa10.53□□□□□ -0.72
PTPN7-209ENST00000477554 KRTAP4-16G5E9R7 235 aaPredicted RBP10.52□□□□□ -0.73
PTPN7-209ENST00000477554 TAX1BP3O14907 124 aa10.52□□□□□ -0.73
PTPN7-209ENST00000477554 ANAPC11Q9NYG5 84 aa10.52□□□□□ -0.73
PTPN7-209ENST00000477554 TRIAP1O43715 76 aa10.51□□□□□ -0.73
PTPN7-209ENST00000477554 FAM19A1Q7Z5A9 133 aa10.51□□□□□ -0.73
PTPN7-209ENST00000477554 C9orf118A6NHY6 69 aa10.5□□□□□ -0.73
PTPN7-209ENST00000477554 COX7BP24311 80 aa10.5□□□□□ -0.73
PTPN7-209ENST00000477554 ELOF1P60002 83 aaKnown RBP10.5□□□□□ -0.73
PTPN7-209ENST00000477554 B5MCH6 92 aa10.5□□□□□ -0.73
PTPN7-209ENST00000477554 H0YGX0 51 aa10.5□□□□□ -0.73
PTPN7-209ENST00000477554 UBE2AP49459 152 aa10.5□□□□□ -0.73
PTPN7-209ENST00000477554 PRLHP81277 87 aa10.5□□□□□ -0.73
PTPN7-209ENST00000477554 A0A087X002 238 aa10.49□□□□□ -0.73
PTPN7-209ENST00000477554 SCGB1C2P0DMR2 95 aa10.49□□□□□ -0.73
PTPN7-209ENST00000477554 Q6ZRX8 168 aa10.49□□□□□ -0.73
PTPN7-209ENST00000477554 H3BUT2 72 aa10.48□□□□□ -0.73
PTPN7-209ENST00000477554 LYRM7Q5U5X0 104 aa10.48□□□□□ -0.73
PTPN7-209ENST00000477554 NAA38Q9BRA0 125 aaKnown RBP10.46□□□□□ -0.74
PTPN7-209ENST00000477554 SLC25A20O43772 301 aa10.45□□□□□ -0.74
PTPN7-209ENST00000477554 SNCGO76070 127 aa10.45□□□□□ -0.74
PTPN7-209ENST00000477554 DHRS4-AS1Q9P1J3 65 aa10.45□□□□□ -0.74
PTPN7-209ENST00000477554 LINC00575Q6W349 94 aa10.43□□□□□ -0.74
PTPN7-209ENST00000477554 A0A1W2PPM0 123 aa10.42□□□□□ -0.74
PTPN7-209ENST00000477554 A0A1B0GX51 115 aa10.41□□□□□ -0.74
PTPN7-209ENST00000477554 FABP2P12104 132 aa10.41□□□□□ -0.74
PTPN7-209ENST00000477554 KRTAP13-2Q52LG2 175 aa10.41□□□□□ -0.74
PTPN7-209ENST00000477554 Q9BRP9 147 aa10.41□□□□□ -0.74
PTPN7-209ENST00000477554 hADV29S1A0JD25 119 aa10.41□□□□□ -0.74
PTPN7-209ENST00000477554 HIGD2AQ9BW72 106 aa10.41□□□□□ -0.74
PTPN7-209ENST00000477554 RNF213Q63HN8 5207 aa10.41□□□□□ -0.74
PTPN7-209ENST00000477554 TRBV20-1A0A075B6N2 111 aa10.4□□□□□ -0.75
PTPN7-209ENST00000477554 SMCR5Q8TEV8 140 aa10.4□□□□□ -0.75
PTPN7-209ENST00000477554 CLEC2BQ92478 149 aa10.4□□□□□ -0.75
PTPN7-209ENST00000477554 FAM218AQ96MZ4 157 aa10.38□□□□□ -0.75
PTPN7-209ENST00000477554 LST1O00453 97 aa10.37□□□□□ -0.75
PTPN7-209ENST00000477554 ATXN8Q156A1 80 aa10.37□□□□□ -0.75
PTPN7-209ENST00000477554 TCL1BO95988 128 aa10.35□□□□□ -0.75
PTPN7-209ENST00000477554 DNAL4O96015 105 aa10.35□□□□□ -0.75
PTPN7-209ENST00000477554 TRACP01848 142 aa10.35□□□□□ -0.75
PTPN7-209ENST00000477554 ERC2-IT1O76042 136 aa10.34□□□□□ -0.75
PTPN7-209ENST00000477554 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.33□□□□□ -0.76
PTPN7-209ENST00000477554 SPCS1Q9Y6A9 102 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms