RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 PPDPFLQ8WWR9 84 aa11.25□□□□□ -0.61
HSPG2-208ENST00000471322 IGLV5-37A0A075B6J1 123 aa11.24□□□□□ -0.61
HSPG2-208ENST00000471322 GAGE2BQ13066 116 aa11.24□□□□□ -0.61
HSPG2-208ENST00000471322 A0A087WYN8 130 aa11.24□□□□□ -0.61
HSPG2-208ENST00000471322 TRBV7-6A0A0J9YX20 115 aa11.23□□□□□ -0.61
HSPG2-208ENST00000471322 BAALC-AS2P0C853 105 aa11.23□□□□□ -0.61
HSPG2-208ENST00000471322 DIRC1Q969H9 104 aa11.23□□□□□ -0.61
HSPG2-208ENST00000471322 C16orf90A8MZG2 172 aa11.22□□□□□ -0.61
HSPG2-208ENST00000471322 ZNF73O43830 326 aaPredicted RBP11.21□□□□□ -0.61
HSPG2-208ENST00000471322 SERTAD4-AS1Q5TG53 156 aa11.2□□□□□ -0.62
HSPG2-208ENST00000471322 LINC00575Q6W349 94 aa11.2□□□□□ -0.62
HSPG2-208ENST00000471322 Q8N814 137 aa11.2□□□□□ -0.62
HSPG2-208ENST00000471322 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.19□□□□□ -0.62
HSPG2-208ENST00000471322 LINC00167Q96N53 147 aa11.19□□□□□ -0.62
HSPG2-208ENST00000471322 C7orf33Q8WU49 177 aa11.18□□□□□ -0.62
HSPG2-208ENST00000471322 C9orf163Q8N9P6 203 aa11.17□□□□□ -0.62
HSPG2-208ENST00000471322 KCNQ1DNQ9H478 68 aa11.17□□□□□ -0.62
HSPG2-208ENST00000471322 ORMDL1Q9P0S3 153 aa11.17□□□□□ -0.62
HSPG2-208ENST00000471322 hADV29S1A0JD25 119 aa11.17□□□□□ -0.62
HSPG2-208ENST00000471322 COX7BP24311 80 aa11.17□□□□□ -0.62
HSPG2-208ENST00000471322 C22orf24Q9Y442 160 aa11.16□□□□□ -0.62
HSPG2-208ENST00000471322 APOBP04114 4563 aaKnown RBP11.15□□□□□ -0.62
HSPG2-208ENST00000471322 ELOF1P60002 83 aaKnown RBP11.15□□□□□ -0.62
HSPG2-208ENST00000471322 A0A096LNI7 61 aa11.14□□□□□ -0.63
HSPG2-208ENST00000471322 FAM168BA1KXE4 195 aa11.14□□□□□ -0.63
HSPG2-208ENST00000471322 H3BQ85 93 aa11.14□□□□□ -0.63
HSPG2-208ENST00000471322 MRPL55Q7Z7F7 128 aaKnown RBP11.14□□□□□ -0.63
HSPG2-208ENST00000471322 RYR1P21817 5038 aa11.14□□□□□ -0.63
HSPG2-208ENST00000471322 TEX49A0A1B0GTD5 131 aa11.13□□□□□ -0.63
HSPG2-208ENST00000471322 LINC00474Q9P2X8 69 aa11.13□□□□□ -0.63
HSPG2-208ENST00000471322 PRYO14603 147 aa11.13□□□□□ -0.63
HSPG2-208ENST00000471322 FAM19A5Q7Z5A7 132 aaPredicted RBP11.13□□□□□ -0.63
HSPG2-208ENST00000471322 HERC2O95714 4834 aa11.12□□□□□ -0.63
HSPG2-208ENST00000471322 IGLV1-50A0A075B6I6 118 aa11.12□□□□□ -0.63
HSPG2-208ENST00000471322 IGLV5-52A0A0A0MRZ9 124 aa11.12□□□□□ -0.63
HSPG2-208ENST00000471322 TMEM256-PLSCR3K7ERE1 68 aa11.12□□□□□ -0.63
HSPG2-208ENST00000471322 GHRHP01286 108 aa11.12□□□□□ -0.63
HSPG2-208ENST00000471322 HSPG2P98160 4391 aa11.11□□□□□ -0.63
HSPG2-208ENST00000471322 IGKV2-24A0A0C4DH68 120 aa11.11□□□□□ -0.63
HSPG2-208ENST00000471322 KRTAP7-1Q8IUC3 87 aa11.11□□□□□ -0.63
HSPG2-208ENST00000471322 VPS25Q9BRG1 176 aa11.1□□□□□ -0.63
HSPG2-208ENST00000471322 INAFM2P0DMQ5 153 aa11.09□□□□□ -0.63
HSPG2-208ENST00000471322 SDIM1Q6ZPB5 146 aa11.09□□□□□ -0.63
HSPG2-208ENST00000471322 KRTAP10-1P60331 282 aa11.09□□□□□ -0.63
HSPG2-208ENST00000471322 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.09□□□□□ -0.63
HSPG2-208ENST00000471322 LINC00528Q8N1L1 170 aa11.09□□□□□ -0.63
HSPG2-208ENST00000471322 RPL37AP8A6NKH3 93 aa11.07□□□□□ -0.64
HSPG2-208ENST00000471322 SPRR1AP35321 89 aa11.06□□□□□ -0.64
HSPG2-208ENST00000471322 A0A1W2PNN7 141 aa11.06□□□□□ -0.64
HSPG2-208ENST00000471322 OBSCN-AS1Q96MR7 158 aa11.05□□□□□ -0.64
HSPG2-208ENST00000471322 ETDCA0A1B0GVM5 59 aa11.04□□□□□ -0.64
HSPG2-208ENST00000471322 HAMPP81172 84 aa11.04□□□□□ -0.64
HSPG2-208ENST00000471322 Q6ZQY7 126 aa11.04□□□□□ -0.64
HSPG2-208ENST00000471322 JMJD7-PLA2G4BH0Y9G9 81 aa11.03□□□□□ -0.64
HSPG2-208ENST00000471322 DHRS4-AS1Q9P1J3 65 aa11.03□□□□□ -0.64
HSPG2-208ENST00000471322 KRTAP4-16G5E9R7 235 aaPredicted RBP11.02□□□□□ -0.64
HSPG2-208ENST00000471322 B5MCH6 92 aa11.02□□□□□ -0.65
HSPG2-208ENST00000471322 CHTF8P0CG12 524 aa11.02□□□□□ -0.65
HSPG2-208ENST00000471322 REG3GQ6UW15 175 aa11.02□□□□□ -0.65
HSPG2-208ENST00000471322 FAM240AA0A1B0GVK7 77 aa11.01□□□□□ -0.65
HSPG2-208ENST00000471322 Q6ZRX8 168 aa11.01□□□□□ -0.65
HSPG2-208ENST00000471322 DNAH8Q96JB1 4490 aa11.01□□□□□ -0.65
HSPG2-208ENST00000471322 ACYP1P07311 99 aa10.99□□□□□ -0.65
HSPG2-208ENST00000471322 DPH3Q96FX2 82 aa10.99□□□□□ -0.65
HSPG2-208ENST00000471322 FAM30AQ9NZY2 134 aa10.99□□□□□ -0.65
HSPG2-208ENST00000471322 FAT1Q14517 4588 aa10.99□□□□□ -0.65
HSPG2-208ENST00000471322 CDK2AP2O75956 126 aa10.98□□□□□ -0.65
HSPG2-208ENST00000471322 SPACA4Q8TDM5 124 aa10.97□□□□□ -0.65
HSPG2-208ENST00000471322 EPM2AB3EWF7 344 aa10.96□□□□□ -0.65
HSPG2-208ENST00000471322 XGP55808 180 aa10.96□□□□□ -0.65
HSPG2-208ENST00000471322 UBE2BP63146 152 aa10.96□□□□□ -0.65
HSPG2-208ENST00000471322 KRTAP17-1Q9BYP8 105 aa10.96□□□□□ -0.65
HSPG2-208ENST00000471322 CDIP1Q9H305 208 aa10.95□□□□□ -0.66
HSPG2-208ENST00000471322 LAMTOR3Q9UHA4 124 aa10.95□□□□□ -0.66
HSPG2-208ENST00000471322 PHF5AQ7RTV0 110 aaKnown RBP10.95□□□□□ -0.66
HSPG2-208ENST00000471322 C14orf132Q9NPU4 83 aa10.95□□□□□ -0.66
HSPG2-208ENST00000471322 RBM3P98179 157 aaKnown RBP10.93□□□□□ -0.66
HSPG2-208ENST00000471322 Q9BRP9 147 aa10.93□□□□□ -0.66
HSPG2-208ENST00000471322 SIGMAR1Q99720 223 aa10.92□□□□□ -0.66
HSPG2-208ENST00000471322 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.92□□□□□ -0.66
HSPG2-208ENST00000471322 ABCA13Q86UQ4 5058 aa10.92□□□□□ -0.66
HSPG2-208ENST00000471322 PCLOQ9Y6V0 5065 aa10.91□□□□□ -0.66
HSPG2-208ENST00000471322 PANO1I0J062 215 aa10.91□□□□□ -0.66
HSPG2-208ENST00000471322 GAGE2AQ6NT46 116 aa10.91□□□□□ -0.66
HSPG2-208ENST00000471322 SMR3BP02814 79 aaPredicted RBP10.91□□□□□ -0.66
HSPG2-208ENST00000471322 PDE6GP18545 87 aa10.9□□□□□ -0.66
HSPG2-208ENST00000471322 FAM19A1Q7Z5A9 133 aa10.9□□□□□ -0.66
HSPG2-208ENST00000471322 H0Y9J4 135 aa10.89□□□□□ -0.67
HSPG2-208ENST00000471322 CCKP06307 115 aa10.89□□□□□ -0.67
HSPG2-208ENST00000471322 NDUFV3P56181 108 aaKnown RBP10.89□□□□□ -0.67
HSPG2-208ENST00000471322 C21orf62-AS1Q17RA5 79 aa10.89□□□□□ -0.67
HSPG2-208ENST00000471322 Q6ZSA8 131 aa10.89□□□□□ -0.67
HSPG2-208ENST00000471322 DSCR8Q96T75 97 aa10.88□□□□□ -0.67
HSPG2-208ENST00000471322 LOC110117498A0A087WWA1 95 aa10.87□□□□□ -0.67
HSPG2-208ENST00000471322 KRTAP4-5Q9BYR2 181 aa10.87□□□□□ -0.67
HSPG2-208ENST00000471322 IGLV5-48A0A075B6I7 105 aa10.87□□□□□ -0.67
HSPG2-208ENST00000471322 A0A1B0GV72 72 aa10.87□□□□□ -0.67
HSPG2-208ENST00000471322 PLAC8Q9NZF1 115 aa10.87□□□□□ -0.67
HSPG2-208ENST00000471322 SCXQ7RTU7 201 aa10.86□□□□□ -0.67
HSPG2-208ENST00000471322 Q8N377 158 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms