RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 COMMD7Q86VX2 200 aa9.96□□□□□ -0.82
NCKIPSD-209ENST00000470006 ARL17AQ8IVW1 177 aa9.96□□□□□ -0.82
NCKIPSD-209ENST00000470006 TRAV12-1A0A0B4J245 112 aa9.94□□□□□ -0.82
NCKIPSD-209ENST00000470006 SPRR1BP22528 89 aa9.94□□□□□ -0.82
NCKIPSD-209ENST00000470006 CD164Q04900 197 aa9.94□□□□□ -0.82
NCKIPSD-209ENST00000470006 C1orf195Q5TG92 126 aa9.94□□□□□ -0.82
NCKIPSD-209ENST00000470006 PRO1933Q9H354 126 aa9.93□□□□□ -0.82
NCKIPSD-209ENST00000470006 Q1RN00 199 aa9.92□□□□□ -0.82
NCKIPSD-209ENST00000470006 IFI27L1Q96BM0 104 aa9.92□□□□□ -0.82
NCKIPSD-209ENST00000470006 FCGBPQ9Y6R7 5405 aaPredicted RBP9.92□□□□□ -0.82
NCKIPSD-209ENST00000470006 NDUFC2O95298 119 aa9.91□□□□□ -0.82
NCKIPSD-209ENST00000470006 TRAPPC1Q9Y5R8 145 aa9.91□□□□□ -0.82
NCKIPSD-209ENST00000470006 NPC2P61916 151 aa9.9□□□□□ -0.82
NCKIPSD-209ENST00000470006 DEFB105AQ8NG35 78 aa9.9□□□□□ -0.82
NCKIPSD-209ENST00000470006 RPS10P5Q9NQ39 176 aa9.9□□□□□ -0.82
NCKIPSD-209ENST00000470006 CBY1Q9Y3M2 126 aa9.9□□□□□ -0.82
NCKIPSD-209ENST00000470006 TAL2Q16559 108 aa9.89□□□□□ -0.83
NCKIPSD-209ENST00000470006 DHRS4-AS1Q9P1J3 65 aa9.89□□□□□ -0.83
NCKIPSD-209ENST00000470006 TSPEAR-AS2P59090 65 aa9.88□□□□□ -0.83
NCKIPSD-209ENST00000470006 IFITM2Q01629 132 aa9.88□□□□□ -0.83
NCKIPSD-209ENST00000470006 H0Y8G0 127 aa9.87□□□□□ -0.83
NCKIPSD-209ENST00000470006 KRTAP9-8Q9BYQ0 159 aa9.87□□□□□ -0.83
NCKIPSD-209ENST00000470006 LEPROTO15243 131 aa9.86□□□□□ -0.83
NCKIPSD-209ENST00000470006 AKR1D1P51857 326 aa9.86□□□□□ -0.83
NCKIPSD-209ENST00000470006 Q5XG85 94 aa9.86□□□□□ -0.83
NCKIPSD-209ENST00000470006 SMIM29Q86T20 159 aa9.86□□□□□ -0.83
NCKIPSD-209ENST00000470006 OR13C6PQ8NH95 151 aa9.85□□□□□ -0.83
NCKIPSD-209ENST00000470006 TMEM218A2RU14 115 aa9.84□□□□□ -0.83
NCKIPSD-209ENST00000470006 RHEBQ15382 184 aa9.84□□□□□ -0.83
NCKIPSD-209ENST00000470006 KRTAP19-1Q8IUB9 90 aa9.84□□□□□ -0.83
NCKIPSD-209ENST00000470006 ATP11AUNQ6ZP68 121 aa9.83□□□□□ -0.84
NCKIPSD-209ENST00000470006 J3QQQ9 107 aa9.82□□□□□ -0.84
NCKIPSD-209ENST00000470006 A0A0G2JQZ4 141 aa9.81□□□□□ -0.84
NCKIPSD-209ENST00000470006 LGALS3P17931 250 aaKnown RBP9.81□□□□□ -0.84
NCKIPSD-209ENST00000470006 SOSTDC1Q6X4U4 206 aa9.81□□□□□ -0.84
NCKIPSD-209ENST00000470006 TEX49A0A1B0GTD5 131 aa9.8□□□□□ -0.84
NCKIPSD-209ENST00000470006 EIF4EBP3O60516 100 aaPredicted RBP9.79□□□□□ -0.84
NCKIPSD-209ENST00000470006 TCL1BO95988 128 aa9.79□□□□□ -0.84
NCKIPSD-209ENST00000470006 NMUP48645 174 aa9.79□□□□□ -0.84
NCKIPSD-209ENST00000470006 UQCC3Q6UW78 93 aa9.79□□□□□ -0.84
NCKIPSD-209ENST00000470006 C20orf202A1L168 122 aa9.78□□□□□ -0.84
NCKIPSD-209ENST00000470006 COX7BP24311 80 aa9.78□□□□□ -0.84
NCKIPSD-209ENST00000470006 HERVK_113P61574 105 aa9.78□□□□□ -0.84
NCKIPSD-209ENST00000470006 CHCHD1Q96BP2 118 aaKnown RBP9.78□□□□□ -0.84
NCKIPSD-209ENST00000470006 PCP2Q8IVA1 136 aa9.77□□□□□ -0.85
NCKIPSD-209ENST00000470006 ADAMTSL4-AS1Q5T5F5 129 aa9.76□□□□□ -0.85
NCKIPSD-209ENST00000470006 SYNE2Q8WXH0 6885 aaKnown RBP9.74□□□□□ -0.85
NCKIPSD-209ENST00000470006 ELOF1P60002 83 aaKnown RBP9.74□□□□□ -0.85
NCKIPSD-209ENST00000470006 CLLU1Q5K131 121 aa9.74□□□□□ -0.85
NCKIPSD-209ENST00000470006 PLNP26678 52 aa9.73□□□□□ -0.85
NCKIPSD-209ENST00000470006 HSBP1O75506 76 aa9.72□□□□□ -0.85
NCKIPSD-209ENST00000470006 C6orf99Q4VX62 202 aa9.72□□□□□ -0.85
NCKIPSD-209ENST00000470006 OBSCN-AS1Q96MR7 158 aa9.72□□□□□ -0.85
NCKIPSD-209ENST00000470006 A0A0J9YXY3 114 aa9.71□□□□□ -0.86
NCKIPSD-209ENST00000470006 SPANXCQ9NY87 97 aa9.71□□□□□ -0.86
NCKIPSD-209ENST00000470006 MACF1Q9UPN3 7388 aaKnown RBP9.71□□□□□ -0.86
NCKIPSD-209ENST00000470006 LCE2BO14633 110 aa9.7□□□□□ -0.86
NCKIPSD-209ENST00000470006 C10orf91Q5T1B1 145 aa9.7□□□□□ -0.86
NCKIPSD-209ENST00000470006 Q75L30 129 aa9.7□□□□□ -0.86
NCKIPSD-209ENST00000470006 TRBV20-1A0A075B6N2 111 aa9.69□□□□□ -0.86
NCKIPSD-209ENST00000470006 MT2AP02795 61 aa9.69□□□□□ -0.86
NCKIPSD-209ENST00000470006 SPANXDQ9BXN6 97 aa9.69□□□□□ -0.86
NCKIPSD-209ENST00000470006 DPM2O94777 84 aa9.68□□□□□ -0.86
NCKIPSD-209ENST00000470006 PMCHL2Q9BQD1 86 aa9.68□□□□□ -0.86
NCKIPSD-209ENST00000470006 LINC00308Q8TCZ7 52 aa9.67□□□□□ -0.86
NCKIPSD-209ENST00000470006 LEPROTL1O95214 131 aa9.65□□□□□ -0.86
NCKIPSD-209ENST00000470006 IGKCP01834 107 aa9.65□□□□□ -0.86
NCKIPSD-209ENST00000470006 LINC00846Q9NV44 126 aa9.65□□□□□ -0.86
NCKIPSD-209ENST00000470006 KRTAP10-10P60014 251 aa9.63□□□□□ -0.87
NCKIPSD-209ENST00000470006 IGLV5-48A0A075B6I7 105 aa9.62□□□□□ -0.87
NCKIPSD-209ENST00000470006 MT1FP04733 61 aa9.61□□□□□ -0.87
NCKIPSD-209ENST00000470006 LINC00518Q8N0U6 118 aa9.61□□□□□ -0.87
NCKIPSD-209ENST00000470006 Q96NJ1 140 aa9.61□□□□□ -0.87
NCKIPSD-209ENST00000470006 F8WEM9 126 aa9.6□□□□□ -0.87
NCKIPSD-209ENST00000470006 TRBV7-6A0A0J9YX20 115 aa9.59□□□□□ -0.87
NCKIPSD-209ENST00000470006 FAM236DA0A1B0GTK5 79 aa9.59□□□□□ -0.87
NCKIPSD-209ENST00000470006 A0A1B0GWB2 263 aa9.59□□□□□ -0.87
NCKIPSD-209ENST00000470006 FAM236CP0DP71 79 aa9.59□□□□□ -0.87
NCKIPSD-209ENST00000470006 FABP4P15090 132 aa9.58□□□□□ -0.88
NCKIPSD-209ENST00000470006 KRTAP9-3Q9BYQ3 159 aa9.58□□□□□ -0.88
NCKIPSD-209ENST00000470006 LITAFQ99732 161 aa9.57□□□□□ -0.88
NCKIPSD-209ENST00000470006 HSPB8Q9UJY1 196 aa9.57□□□□□ -0.88
NCKIPSD-209ENST00000470006 E9PLD3 99 aa9.56□□□□□ -0.88
NCKIPSD-209ENST00000470006 TIMM17BO60830 172 aa9.54□□□□□ -0.88
NCKIPSD-209ENST00000470006 TRBV7-7A0A0K0K1E9 115 aa9.52□□□□□ -0.89
NCKIPSD-209ENST00000470006 SERF1AO75920 110 aa9.52□□□□□ -0.89
NCKIPSD-209ENST00000470006 NHP2Q9NX24 153 aaKnown RBP9.52□□□□□ -0.89
NCKIPSD-209ENST00000470006 A6NDN8 102 aa9.51□□□□□ -0.89
NCKIPSD-209ENST00000470006 APOC3P02656 99 aa9.5□□□□□ -0.89
NCKIPSD-209ENST00000470006 IGFL1Q6UW32 110 aa9.5□□□□□ -0.89
NCKIPSD-209ENST00000470006 C20orf166-AS1Q96NR2 134 aa9.5□□□□□ -0.89
NCKIPSD-209ENST00000470006 A4D1N5 150 aa9.49□□□□□ -0.89
NCKIPSD-209ENST00000470006 ZNF815PA8K554 130 aa9.48□□□□□ -0.89
NCKIPSD-209ENST00000470006 Q6JHZ5 121 aa9.48□□□□□ -0.89
NCKIPSD-209ENST00000470006 LST1O00453 97 aa9.47□□□□□ -0.89
NCKIPSD-209ENST00000470006 SLC7A5P1Q8MH63 180 aa9.47□□□□□ -0.89
NCKIPSD-209ENST00000470006 CLEC2BQ92478 149 aa9.47□□□□□ -0.89
NCKIPSD-209ENST00000470006 SNAPINO95295 136 aa9.46□□□□□ -0.9
NCKIPSD-209ENST00000470006 LINC00310P59036 64 aa9.45□□□□□ -0.9
NCKIPSD-209ENST00000470006 KRTAP19-6Q3LI70 58 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms