RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 SPRR2BP35325 72 aa-0.15□□□□□ -2.43
PRPF40A-205ENST00000467114 LRP1BQ9NZR2 4599 aa-0.15□□□□□ -2.43
PRPF40A-205ENST00000467114 ZANQ9Y493 2812 aa-0.15□□□□□ -2.43
PRPF40A-205ENST00000467114 QSER1Q2KHR3 1735 aa-0.16□□□□□ -2.43
PRPF40A-205ENST00000467114 ACANP16112 2415 aa-0.16□□□□□ -2.43
PRPF40A-205ENST00000467114 NDUFA3O95167 84 aa-0.16□□□□□ -2.44
PRPF40A-205ENST00000467114 FLNBO75369 2602 aaKnown RBP-0.16□□□□□ -2.44
PRPF40A-205ENST00000467114 LRRC9Q6ZRR7 1453 aa-0.16□□□□□ -2.44
PRPF40A-205ENST00000467114 KIF14Q15058 1648 aa-0.16□□□□□ -2.44
PRPF40A-205ENST00000467114 USP32Q8NFA0 1604 aa-0.16□□□□□ -2.44
PRPF40A-205ENST00000467114 KNL1Q8NG31 2342 aa-0.17□□□□□ -2.44
PRPF40A-205ENST00000467114 CNOT1A5YKK6 2376 aaKnown RBP-0.17□□□□□ -2.44
PRPF40A-205ENST00000467114 ZNF831Q5JPB2 1677 aa-0.18□□□□□ -2.44
PRPF40A-205ENST00000467114 MAP1AP78559 2803 aaPredicted RBP-0.18□□□□□ -2.44
PRPF40A-205ENST00000467114 NCOA2Q15596 1464 aa-0.18□□□□□ -2.44
PRPF40A-205ENST00000467114 PREX1Q8TCU6 1659 aa-0.18□□□□□ -2.44
PRPF40A-205ENST00000467114 SUPT6HQ7KZ85 1726 aaKnown RBP-0.18□□□□□ -2.44
PRPF40A-205ENST00000467114 UACAQ9BZF9 1416 aa-0.19□□□□□ -2.44
PRPF40A-205ENST00000467114 KANTRA0A1W2PQU2 76 aa-0.19□□□□□ -2.44
PRPF40A-205ENST00000467114 TRANK1O15050 2925 aa-0.2□□□□□ -2.44
PRPF40A-205ENST00000467114 PKHD1P08F94 4074 aa-0.2□□□□□ -2.44
PRPF40A-205ENST00000467114 POLR1AO95602 1720 aaPredicted RBP-0.2□□□□□ -2.44
PRPF40A-205ENST00000467114 KRTAP6-1Q3LI64 71 aa-0.2□□□□□ -2.44
PRPF40A-205ENST00000467114 COX6B2Q6YFQ2 88 aa-0.2□□□□□ -2.44
PRPF40A-205ENST00000467114 PPLO60437 1756 aa-0.2□□□□□ -2.44
PRPF40A-205ENST00000467114 MUC2Q02817 5179 aa-0.2□□□□□ -2.44
PRPF40A-205ENST00000467114 PCNX1Q96RV3 2341 aa-0.2□□□□□ -2.44
PRPF40A-205ENST00000467114 AKAP13Q12802 2813 aa-0.2□□□□□ -2.44
PRPF40A-205ENST00000467114 NDUFB1O75438 58 aa-0.21□□□□□ -2.44
PRPF40A-205ENST00000467114 MAP3K4Q9Y6R4 1608 aa-0.21□□□□□ -2.44
PRPF40A-205ENST00000467114 DOT1LQ8TEK3 1739 aa-0.21□□□□□ -2.44
PRPF40A-205ENST00000467114 LTN1O94822 1766 aa-0.22□□□□□ -2.44
PRPF40A-205ENST00000467114 ST20Q9HBF5 79 aa-0.22□□□□□ -2.44
PRPF40A-205ENST00000467114 SRRM2Q9UQ35 2752 aaKnown RBP-0.23□□□□□ -2.45
PRPF40A-205ENST00000467114 URB2Q14146 1524 aaKnown RBP-0.23□□□□□ -2.45
PRPF40A-205ENST00000467114 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.23□□□□□ -2.45
PRPF40A-205ENST00000467114 C4AP0C0L4 1744 aa-0.23□□□□□ -2.45
PRPF40A-205ENST00000467114 C4BP0C0L5 1744 aa-0.23□□□□□ -2.45
PRPF40A-205ENST00000467114 RGPD8O14715 1765 aaPredicted RBP-0.23□□□□□ -2.45
PRPF40A-205ENST00000467114 RGPD5Q99666 1765 aa-0.23□□□□□ -2.45
PRPF40A-205ENST00000467114 IFI6P09912 130 aa-0.23□□□□□ -2.45
PRPF40A-205ENST00000467114 ADIRFQ15847 76 aa-0.23□□□□□ -2.45
PRPF40A-205ENST00000467114 KRTAP6-2Q3LI66 62 aa-0.23□□□□□ -2.45
PRPF40A-205ENST00000467114 MED14O60244 1454 aa-0.23□□□□□ -2.45
PRPF40A-205ENST00000467114 RB1CC1Q8TDY2 1594 aa-0.23□□□□□ -2.45
PRPF40A-205ENST00000467114 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.23□□□□□ -2.45
PRPF40A-205ENST00000467114 CICQ96RK0 1608 aaPredicted RBP-0.24□□□□□ -2.45
PRPF40A-205ENST00000467114 PRRC2CQ9Y520 2896 aaKnown RBP-0.24□□□□□ -2.45
PRPF40A-205ENST00000467114 UMAD1C9J7I0 102 aa-0.24□□□□□ -2.45
PRPF40A-205ENST00000467114 H3BUT2 72 aa-0.24□□□□□ -2.45
PRPF40A-205ENST00000467114 S100A13Q99584 98 aa-0.24□□□□□ -2.45
PRPF40A-205ENST00000467114 DIP2BQ9P265 1576 aa-0.24□□□□□ -2.45
PRPF40A-205ENST00000467114 FLGP20930 4061 aaPredicted RBP-0.24□□□□□ -2.45
PRPF40A-205ENST00000467114 PKD1P98161 4303 aa-0.24□□□□□ -2.45
PRPF40A-205ENST00000467114 SVEP1Q4LDE5 3571 aa-0.25□□□□□ -2.45
PRPF40A-205ENST00000467114 NBEAL1Q6ZS30 2694 aa-0.25□□□□□ -2.45
PRPF40A-205ENST00000467114 DEFA5Q01523 94 aa-0.25□□□□□ -2.45
PRPF40A-205ENST00000467114 ADAMTS12P58397 1594 aa-0.25□□□□□ -2.45
PRPF40A-205ENST00000467114 NWD1Q149M9 1564 aa-0.25□□□□□ -2.45
PRPF40A-205ENST00000467114 PIK3C2BO00750 1634 aa-0.25□□□□□ -2.45
PRPF40A-205ENST00000467114 PTPN23Q9H3S7 1636 aa-0.25□□□□□ -2.45
PRPF40A-205ENST00000467114 PDE4DIPQ5VU43 2346 aa-0.25□□□□□ -2.45
PRPF40A-205ENST00000467114 TNRC18O15417 2968 aaPredicted RBP-0.26□□□□□ -2.45
PRPF40A-205ENST00000467114 TIAM2Q8IVF5 1701 aa-0.26□□□□□ -2.45
PRPF40A-205ENST00000467114 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.26□□□□□ -2.45
PRPF40A-205ENST00000467114 CCDC18Q5T9S5 1454 aa-0.26□□□□□ -2.45
PRPF40A-205ENST00000467114 A0A087WXM4 84 aa-0.26□□□□□ -2.45
PRPF40A-205ENST00000467114 H0YGG7 62 aa-0.26□□□□□ -2.45
PRPF40A-205ENST00000467114 SMIM13P0DJ93 91 aa-0.26□□□□□ -2.45
PRPF40A-205ENST00000467114 IFI27P40305 119 aaPredicted RBP-0.26□□□□□ -2.45
PRPF40A-205ENST00000467114 LINC00158P58513 81 aa-0.26□□□□□ -2.45
PRPF40A-205ENST00000467114 NREPQ16612 68 aa-0.26□□□□□ -2.45
PRPF40A-205ENST00000467114 KRTAP19-7Q3SYF9 63 aa-0.26□□□□□ -2.45
PRPF40A-205ENST00000467114 PRO3102Q9H379 93 aa-0.26□□□□□ -2.45
PRPF40A-205ENST00000467114 PDZD2O15018 2839 aa-0.26□□□□□ -2.45
PRPF40A-205ENST00000467114 NESP48681 1621 aa-0.27□□□□□ -2.45
PRPF40A-205ENST00000467114 HECTD1Q9ULT8 2610 aa-0.27□□□□□ -2.45
PRPF40A-205ENST00000467114 SETD2Q9BYW2 2564 aaPredicted RBP-0.27□□□□□ -2.45
PRPF40A-205ENST00000467114 NBASA2RRP1 2371 aa-0.27□□□□□ -2.45
PRPF40A-205ENST00000467114 NDUFA4O00483 81 aa-0.27□□□□□ -2.45
PRPF40A-205ENST00000467114 DEFB121Q5J5C9 76 aa-0.27□□□□□ -2.45
PRPF40A-205ENST00000467114 BVES-AS1Q5T3Y7 98 aa-0.27□□□□□ -2.45
PRPF40A-205ENST00000467114 SCN11AQ9UI33 1791 aa-0.27□□□□□ -2.45
PRPF40A-205ENST00000467114 ARFGEF2Q9Y6D5 1785 aa-0.27□□□□□ -2.45
PRPF40A-205ENST00000467114 MAGI3Q5TCQ9 1506 aa-0.28□□□□□ -2.45
PRPF40A-205ENST00000467114 ERVK-7P63135 1459 aa-0.28□□□□□ -2.45
PRPF40A-205ENST00000467114 C3orf79P0CE67 100 aa-0.28□□□□□ -2.45
PRPF40A-205ENST00000467114 STAB2Q8WWQ8 2551 aa-0.28□□□□□ -2.45
PRPF40A-205ENST00000467114 DCAF1Q9Y4B6 1507 aa-0.28□□□□□ -2.45
PRPF40A-205ENST00000467114 TGP01266 2768 aa-0.28□□□□□ -2.46
PRPF40A-205ENST00000467114 LYSTQ99698 3801 aa-0.29□□□□□ -2.46
PRPF40A-205ENST00000467114 LCE6AA0A183 80 aa-0.29□□□□□ -2.46
PRPF40A-205ENST00000467114 H0YAA0 97 aa-0.29□□□□□ -2.46
PRPF40A-205ENST00000467114 SPRR2AP35326 72 aa-0.29□□□□□ -2.46
PRPF40A-205ENST00000467114 ATP5EP2Q5VTU8 51 aa-0.29□□□□□ -2.46
PRPF40A-205ENST00000467114 MUC12Q9UKN1 5478 aa-0.3□□□□□ -2.46
PRPF40A-205ENST00000467114 SPTBN4Q9H254 2564 aa-0.3□□□□□ -2.46
PRPF40A-205ENST00000467114 ARHGAP35Q9NRY4 1499 aa-0.3□□□□□ -2.46
PRPF40A-205ENST00000467114 CREBBPQ92793 2442 aa-0.3□□□□□ -2.46
PRPF40A-205ENST00000467114 DSPP15924 2871 aaKnown RBP-0.31□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms