RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 A0A0J9YXY3 114 aa8.48□□□□□ -1.05
MRPL55-225ENST00000465268 C3orf79P0CE67 100 aa8.48□□□□□ -1.05
MRPL55-225ENST00000465268 SOSTDC1Q6X4U4 206 aa8.48□□□□□ -1.05
MRPL55-225ENST00000465268 Q8NBF4 154 aa8.48□□□□□ -1.05
MRPL55-225ENST00000465268 DDTP30046 118 aa8.47□□□□□ -1.05
MRPL55-225ENST00000465268 KRTDAPP60985 99 aa8.47□□□□□ -1.05
MRPL55-225ENST00000465268 LINC00483Q53H64 154 aa8.47□□□□□ -1.05
MRPL55-225ENST00000465268 S100A7L2Q5SY68 101 aa8.47□□□□□ -1.05
MRPL55-225ENST00000465268 ADAMTSL4-AS1Q5T5F5 129 aa8.47□□□□□ -1.05
MRPL55-225ENST00000465268 Q9BRP9 147 aa8.47□□□□□ -1.05
MRPL55-225ENST00000465268 HINT1P49773 126 aaPredicted RBP8.46□□□□□ -1.06
MRPL55-225ENST00000465268 JOSD1Q15040 202 aaPredicted RBP8.46□□□□□ -1.06
MRPL55-225ENST00000465268 SPAG11AQ6PDA7 123 aa8.46□□□□□ -1.06
MRPL55-225ENST00000465268 CDIP1Q9H305 208 aa8.46□□□□□ -1.06
MRPL55-225ENST00000465268 ZNF815PA8K554 130 aa8.45□□□□□ -1.06
MRPL55-225ENST00000465268 NPC2P61916 151 aa8.45□□□□□ -1.06
MRPL55-225ENST00000465268 GAGE2AQ6NT46 116 aa8.45□□□□□ -1.06
MRPL55-225ENST00000465268 Q6ZVH6 145 aa8.45□□□□□ -1.06
MRPL55-225ENST00000465268 LINC00518Q8N0U6 118 aa8.45□□□□□ -1.06
MRPL55-225ENST00000465268 C5orf52A6NGY3 159 aa8.44□□□□□ -1.06
MRPL55-225ENST00000465268 IGLV6-57P01721 117 aa8.44□□□□□ -1.06
MRPL55-225ENST00000465268 SPANXCQ9NY87 97 aa8.44□□□□□ -1.06
MRPL55-225ENST00000465268 S100A6P06703 90 aa8.43□□□□□ -1.06
MRPL55-225ENST00000465268 S100A2P29034 98 aa8.43□□□□□ -1.06
MRPL55-225ENST00000465268 LCE2AQ5TA79 106 aaPredicted RBP8.42□□□□□ -1.06
MRPL55-225ENST00000465268 IGLV9-49A0A0B4J1Y8 123 aa8.41□□□□□ -1.06
MRPL55-225ENST00000465268 IFITM1P13164 125 aa8.41□□□□□ -1.06
MRPL55-225ENST00000465268 MOBPQ13875 183 aa8.41□□□□□ -1.06
MRPL55-225ENST00000465268 C4orf48Q5BLP8 95 aa8.41□□□□□ -1.06
MRPL55-225ENST00000465268 Q6ZRX8 168 aa8.41□□□□□ -1.06
MRPL55-225ENST00000465268 TRAV23DV6A0A075B6W5 121 aa8.4□□□□□ -1.06
MRPL55-225ENST00000465268 SCGB1D4Q6XE38 83 aa8.4□□□□□ -1.06
MRPL55-225ENST00000465268 LINC00308Q8TCZ7 52 aa8.4□□□□□ -1.06
MRPL55-225ENST00000465268 LITAFQ99732 161 aa8.4□□□□□ -1.06
MRPL55-225ENST00000465268 KRTAP13-3Q3SY46 172 aa8.39□□□□□ -1.07
MRPL55-225ENST00000465268 ST20-AS1Q8NBB2 130 aa8.39□□□□□ -1.07
MRPL55-225ENST00000465268 SPANXDQ9BXN6 97 aa8.39□□□□□ -1.07
MRPL55-225ENST00000465268 A0A0U1RQV1 116 aa8.38□□□□□ -1.07
MRPL55-225ENST00000465268 HSBP1L1C9JCN9 74 aa8.38□□□□□ -1.07
MRPL55-225ENST00000465268 FP248Q71RG6 208 aaPredicted RBP8.38□□□□□ -1.07
MRPL55-225ENST00000465268 ZNF73O43830 326 aaPredicted RBP8.37□□□□□ -1.07
MRPL55-225ENST00000465268 SPINK1P00995 79 aa8.37□□□□□ -1.07
MRPL55-225ENST00000465268 TTTY13Q9BZ97 58 aa8.37□□□□□ -1.07
MRPL55-225ENST00000465268 SSBP3-AS1Q7Z2R9 100 aa8.35□□□□□ -1.07
MRPL55-225ENST00000465268 HIST3H2BBQ8N257 126 aa8.35□□□□□ -1.07
MRPL55-225ENST00000465268 Q8N377 158 aa8.35□□□□□ -1.07
MRPL55-225ENST00000465268 OR13C6PQ8NH95 151 aa8.35□□□□□ -1.07
MRPL55-225ENST00000465268 SLC25A34Q6PIV7 304 aa8.34□□□□□ -1.07
MRPL55-225ENST00000465268 HIST1H2BLQ99880 126 aa8.34□□□□□ -1.07
MRPL55-225ENST00000465268 KRTAP4-1Q9BYQ7 146 aa8.34□□□□□ -1.07
MRPL55-225ENST00000465268 DHRS4-AS1Q9P1J3 65 aa8.34□□□□□ -1.07
MRPL55-225ENST00000465268 TRBV7-6A0A0J9YX20 115 aa8.32□□□□□ -1.08
MRPL55-225ENST00000465268 ANKRD39Q53RE8 183 aa8.31□□□□□ -1.08
MRPL55-225ENST00000465268 A4D1N5 150 aa8.3□□□□□ -1.08
MRPL55-225ENST00000465268 RPS29P62273 56 aaKnown RBP8.3□□□□□ -1.08
MRPL55-225ENST00000465268 C9orf153Q5TBE3 101 aa8.3□□□□□ -1.08
MRPL55-225ENST00000465268 TRAV13-2A0A0B4J235 113 aa8.29□□□□□ -1.08
MRPL55-225ENST00000465268 ASB16-AS1Q495Z4 193 aa8.29□□□□□ -1.08
MRPL55-225ENST00000465268 ATOH7Q8N100 152 aa8.29□□□□□ -1.08
MRPL55-225ENST00000465268 KRTAP9-2Q9BYQ4 174 aa8.29□□□□□ -1.08
MRPL55-225ENST00000465268 A0A1B0GWB2 263 aa8.26□□□□□ -1.09
MRPL55-225ENST00000465268 SLC25A20O43772 301 aa8.26□□□□□ -1.09
MRPL55-225ENST00000465268 COX7BP24311 80 aa8.26□□□□□ -1.09
MRPL55-225ENST00000465268 ELOF1P60002 83 aaKnown RBP8.26□□□□□ -1.09
MRPL55-225ENST00000465268 PCP2Q8IVA1 136 aa8.26□□□□□ -1.09
MRPL55-225ENST00000465268 NHP2Q9NX24 153 aaKnown RBP8.26□□□□□ -1.09
MRPL55-225ENST00000465268 SPRR1BP22528 89 aa8.25□□□□□ -1.09
MRPL55-225ENST00000465268 MUSTN1Q8IVN3 82 aa8.25□□□□□ -1.09
MRPL55-225ENST00000465268 A6NDN8 102 aa8.24□□□□□ -1.09
MRPL55-225ENST00000465268 SCGB1D1O95968 90 aa8.24□□□□□ -1.09
MRPL55-225ENST00000465268 C6orf99Q4VX62 202 aa8.24□□□□□ -1.09
MRPL55-225ENST00000465268 HRCT1Q6UXD1 115 aa8.24□□□□□ -1.09
MRPL55-225ENST00000465268 VAMP3Q15836 100 aa8.23□□□□□ -1.09
MRPL55-225ENST00000465268 XP32Q5T750 250 aa8.22□□□□□ -1.09
MRPL55-225ENST00000465268 LAMTOR3Q9UHA4 124 aa8.22□□□□□ -1.09
MRPL55-225ENST00000465268 DLEU1O43261 78 aa8.21□□□□□ -1.1
MRPL55-225ENST00000465268 TEX49A0A1B0GTD5 131 aa8.19□□□□□ -1.1
MRPL55-225ENST00000465268 SEC61BP60468 96 aaKnown RBP8.19□□□□□ -1.1
MRPL55-225ENST00000465268 TAL2Q16559 108 aa8.19□□□□□ -1.1
MRPL55-225ENST00000465268 DEFB105AQ8NG35 78 aa8.19□□□□□ -1.1
MRPL55-225ENST00000465268 COX8AP10176 69 aa8.18□□□□□ -1.1
MRPL55-225ENST00000465268 LINC01547P58512 204 aaPredicted RBP8.18□□□□□ -1.1
MRPL55-225ENST00000465268 Q1RN00 199 aa8.18□□□□□ -1.1
MRPL55-225ENST00000465268 A0A0G2JQZ4 141 aa8.17□□□□□ -1.1
MRPL55-225ENST00000465268 SMIM29Q86T20 159 aa8.17□□□□□ -1.1
MRPL55-225ENST00000465268 HIST1H4GQ99525 98 aa8.16□□□□□ -1.1
MRPL55-225ENST00000465268 LIMD2Q9BT23 127 aa8.15□□□□□ -1.1
MRPL55-225ENST00000465268 SNCGO76070 127 aa8.14□□□□□ -1.11
MRPL55-225ENST00000465268 CD164Q04900 197 aa8.14□□□□□ -1.11
MRPL55-225ENST00000465268 SMIM11BQ8TCY0 68 aa8.14□□□□□ -1.11
MRPL55-225ENST00000465268 IGLV5-48A0A075B6I7 105 aa8.13□□□□□ -1.11
MRPL55-225ENST00000465268 C9orf92A6NGG3 77 aa8.13□□□□□ -1.11
MRPL55-225ENST00000465268 H7C2G1 150 aa8.13□□□□□ -1.11
MRPL55-225ENST00000465268 BVES-AS1Q5T3Y7 98 aa8.13□□□□□ -1.11
MRPL55-225ENST00000465268 VAMP8Q9BV40 100 aa8.13□□□□□ -1.11
MRPL55-225ENST00000465268 PRO1933Q9H354 126 aa8.13□□□□□ -1.11
MRPL55-225ENST00000465268 HIGD1BQ9P298 99 aa8.13□□□□□ -1.11
MRPL55-225ENST00000465268 LCE2CQ5TA81 110 aa8.12□□□□□ -1.11
MRPL55-225ENST00000465268 KRTAP19-2Q3LHN2 52 aa8.1□□□□□ -1.11
MRPL55-225ENST00000465268 PPDPFLQ8WWR9 84 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms