RNA–Protein interactions for RNA: ENST00000464025.5

LMO2-204, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-204ENST00000464025 UBE2DNLQ8IWF7 75 aa11.27□□□□□ -0.61
LMO2-204ENST00000464025 DSCR8Q96T75 97 aa11.26□□□□□ -0.61
LMO2-204ENST00000464025 KRTAP4-16G5E9R7 235 aaPredicted RBP11.25□□□□□ -0.61
LMO2-204ENST00000464025 KRTAP7-1Q8IUC3 87 aa11.25□□□□□ -0.61
LMO2-204ENST00000464025 NUPR2A6NF83 97 aa11.24□□□□□ -0.61
LMO2-204ENST00000464025 ATP5EP2Q5VTU8 51 aa11.24□□□□□ -0.61
LMO2-204ENST00000464025 STAB2Q8WWQ8 2551 aa11.24□□□□□ -0.61
LMO2-204ENST00000464025 TRBV7-4A0A0J9YYF1 115 aa11.24□□□□□ -0.61
LMO2-204ENST00000464025 C14orf177Q52M58 125 aa11.24□□□□□ -0.61
LMO2-204ENST00000464025 DHRS4-AS1Q9P1J3 65 aa11.23□□□□□ -0.61
LMO2-204ENST00000464025 FAM168BA1KXE4 195 aa11.22□□□□□ -0.61
LMO2-204ENST00000464025 Q6ZRX8 168 aa11.21□□□□□ -0.61
LMO2-204ENST00000464025 MRPL55Q7Z7F7 128 aaKnown RBP11.21□□□□□ -0.61
LMO2-204ENST00000464025 FAM236AA0A1B0GUQ0 79 aa11.2□□□□□ -0.62
LMO2-204ENST00000464025 FAM236BA0A1B0GV22 79 aa11.2□□□□□ -0.62
LMO2-204ENST00000464025 C16orf90A8MZG2 172 aa11.2□□□□□ -0.62
LMO2-204ENST00000464025 B5MCH6 92 aa11.2□□□□□ -0.62
LMO2-204ENST00000464025 PSCAO43653 123 aa11.2□□□□□ -0.62
LMO2-204ENST00000464025 UBL5Q9BZL1 73 aa11.2□□□□□ -0.62
LMO2-204ENST00000464025 HIST1H4AP62805 103 aaKnown RBP11.2□□□□□ -0.62
LMO2-204ENST00000464025 COL7A1Q02388 2944 aa11.18□□□□□ -0.62
LMO2-204ENST00000464025 IGKV3D-7A0A0C4DH55 119 aa11.17□□□□□ -0.62
LMO2-204ENST00000464025 RPL37AP8A6NKH3 93 aa11.17□□□□□ -0.62
LMO2-204ENST00000464025 NBDYA0A0U1RRE5 68 aa11.16□□□□□ -0.62
LMO2-204ENST00000464025 ETDCA0A1B0GVM5 59 aa11.16□□□□□ -0.62
LMO2-204ENST00000464025 FAM19A5Q7Z5A7 132 aaPredicted RBP11.16□□□□□ -0.62
LMO2-204ENST00000464025 LINC01547P58512 204 aaPredicted RBP11.15□□□□□ -0.62
LMO2-204ENST00000464025 Q9BRP9 147 aa11.15□□□□□ -0.62
LMO2-204ENST00000464025 PKIGQ9Y2B9 76 aa11.15□□□□□ -0.62
LMO2-204ENST00000464025 Q8N377 158 aa11.14□□□□□ -0.63
LMO2-204ENST00000464025 A0A096LNI7 61 aa11.13□□□□□ -0.63
LMO2-204ENST00000464025 M0R2N4 97 aa11.13□□□□□ -0.63
LMO2-204ENST00000464025 IGLV5-48A0A075B6I7 105 aa11.12□□□□□ -0.63
LMO2-204ENST00000464025 LRCOL1A6NCL2 159 aa11.12□□□□□ -0.63
LMO2-204ENST00000464025 REG3GQ6UW15 175 aa11.11□□□□□ -0.63
LMO2-204ENST00000464025 DNAH10Q8IVF4 4471 aa11.11□□□□□ -0.63
LMO2-204ENST00000464025 ATOX1O00244 68 aa11.1□□□□□ -0.63
LMO2-204ENST00000464025 PLECQ15149 4684 aaKnown RBP11.1□□□□□ -0.63
LMO2-204ENST00000464025 Q6ZRN7 208 aaPredicted RBP11.1□□□□□ -0.63
LMO2-204ENST00000464025 Q6ZVQ6 151 aa11.1□□□□□ -0.63
LMO2-204ENST00000464025 C9orf163Q8N9P6 203 aa11.09□□□□□ -0.63
LMO2-204ENST00000464025 CCDC179H3BU77 68 aa11.08□□□□□ -0.64
LMO2-204ENST00000464025 A0A1B0GW54 56 aa11.07□□□□□ -0.64
LMO2-204ENST00000464025 A0A1W2PNN7 141 aa11.07□□□□□ -0.64
LMO2-204ENST00000464025 LYSTQ99698 3801 aa11.07□□□□□ -0.64
LMO2-204ENST00000464025 VPS13DQ5THJ4 4388 aa11.07□□□□□ -0.64
LMO2-204ENST00000464025 CXCL6P80162 114 aa11.07□□□□□ -0.64
LMO2-204ENST00000464025 DNAH7Q8WXX0 4024 aa11.06□□□□□ -0.64
LMO2-204ENST00000464025 TNP2Q05952 138 aa11.06□□□□□ -0.64
LMO2-204ENST00000464025 CSMD3Q7Z407 3707 aa11.05□□□□□ -0.64
LMO2-204ENST00000464025 DEFB105AQ8NG35 78 aa11.05□□□□□ -0.64
LMO2-204ENST00000464025 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.04□□□□□ -0.64
LMO2-204ENST00000464025 IGKV2-24A0A0C4DH68 120 aa11.04□□□□□ -0.64
LMO2-204ENST00000464025 A0A087WVE0 104 aa11.03□□□□□ -0.64
LMO2-204ENST00000464025 UQCRQO14949 82 aa11.03□□□□□ -0.64
LMO2-204ENST00000464025 PRKDCP78527 4128 aaKnown RBP11.03□□□□□ -0.64
LMO2-204ENST00000464025 UBE2BP63146 152 aa11.03□□□□□ -0.64
LMO2-204ENST00000464025 LINC00474Q9P2X8 69 aa11.03□□□□□ -0.64
LMO2-204ENST00000464025 ERC2-IT1O76042 136 aa11.02□□□□□ -0.65
LMO2-204ENST00000464025 C3orf22Q8N5N4 141 aa11.02□□□□□ -0.65
LMO2-204ENST00000464025 COX7CP15954 63 aa11.01□□□□□ -0.65
LMO2-204ENST00000464025 FAM19A1Q7Z5A9 133 aa11.01□□□□□ -0.65
LMO2-204ENST00000464025 ST20-AS1Q8NBB2 130 aa11.01□□□□□ -0.65
LMO2-204ENST00000464025 H0Y9J4 135 aa11□□□□□ -0.65
LMO2-204ENST00000464025 HAMPP81172 84 aa11□□□□□ -0.65
LMO2-204ENST00000464025 BCE1O60756 84 aa10.99□□□□□ -0.65
LMO2-204ENST00000464025 EPM2AB3EWF7 344 aa10.97□□□□□ -0.65
LMO2-204ENST00000464025 CHTF8P0CG12 524 aa10.96□□□□□ -0.65
LMO2-204ENST00000464025 SMIM29Q86T20 159 aa10.96□□□□□ -0.65
LMO2-204ENST00000464025 SERP2Q8N6R1 65 aa10.96□□□□□ -0.65
LMO2-204ENST00000464025 STARD9Q9P2P6 4700 aa10.96□□□□□ -0.66
LMO2-204ENST00000464025 FUSP35637 526 aaKnown RBP eCLIP10.95□□□□□ -0.66
LMO2-204ENST00000464025 C1orf137Q5JT78 98 aa10.95□□□□□ -0.66
LMO2-204ENST00000464025 Q6ZR54 194 aa10.95□□□□□ -0.66
LMO2-204ENST00000464025 PHF5AQ7RTV0 110 aaKnown RBP10.94□□□□□ -0.66
LMO2-204ENST00000464025 SPRR4Q96PI1 79 aa10.94□□□□□ -0.66
LMO2-204ENST00000464025 A0A1W2PNM2 257 aa10.94□□□□□ -0.66
LMO2-204ENST00000464025 Q8NBF4 154 aa10.94□□□□□ -0.66
LMO2-204ENST00000464025 A0A087WTM6 91 aa10.93□□□□□ -0.66
LMO2-204ENST00000464025 IGLV8-61A0A075B6I0 122 aa10.92□□□□□ -0.66
LMO2-204ENST00000464025 CRYGAP11844 174 aa10.92□□□□□ -0.66
LMO2-204ENST00000464025 PRLHP81277 87 aa10.92□□□□□ -0.66
LMO2-204ENST00000464025 NREPQ16612 68 aa10.92□□□□□ -0.66
LMO2-204ENST00000464025 C9orf153Q5TBE3 101 aa10.92□□□□□ -0.66
LMO2-204ENST00000464025 KRTAP11-1Q8IUC1 163 aa10.91□□□□□ -0.66
LMO2-204ENST00000464025 SPRR1BP22528 89 aa10.9□□□□□ -0.67
LMO2-204ENST00000464025 SPACA4Q8TDM5 124 aa10.89□□□□□ -0.67
LMO2-204ENST00000464025 F8WEM9 126 aa10.88□□□□□ -0.67
LMO2-204ENST00000464025 TENM2Q9NT68 2774 aa10.88□□□□□ -0.67
LMO2-204ENST00000464025 C3orf84H3BNL1 204 aa10.87□□□□□ -0.67
LMO2-204ENST00000464025 SMIM20Q8N5G0 67 aa10.87□□□□□ -0.67
LMO2-204ENST00000464025 HIGD2AQ9BW72 106 aa10.87□□□□□ -0.67
LMO2-204ENST00000464025 KRTAP21-3Q3LHN1 58 aa10.86□□□□□ -0.67
LMO2-204ENST00000464025 LINC00476Q8WZB0 136 aa10.86□□□□□ -0.67
LMO2-204ENST00000464025 PANO1I0J062 215 aa10.86□□□□□ -0.67
LMO2-204ENST00000464025 BPY2O14599 106 aa10.84□□□□□ -0.67
LMO2-204ENST00000464025 SCXQ7RTU7 201 aa10.84□□□□□ -0.67
LMO2-204ENST00000464025 KRTAP13-1Q8IUC0 172 aa10.84□□□□□ -0.67
LMO2-204ENST00000464025 DNAH6Q9C0G6 4158 aa10.84□□□□□ -0.67
LMO2-204ENST00000464025 DNAH17Q9UFH2 4485 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms