RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 LINC00846Q9NV44 126 aa9.46□□□□□ -0.9
HDAC6-213ENST00000462730 TRBV10-3A0A0K0K1G6 114 aa9.45□□□□□ -0.9
HDAC6-213ENST00000462730 IGLV6-57P01721 117 aa9.44□□□□□ -0.9
HDAC6-213ENST00000462730 VPREB1P12018 145 aa9.44□□□□□ -0.9
HDAC6-213ENST00000462730 Q5XG85 94 aa9.44□□□□□ -0.9
HDAC6-213ENST00000462730 LINC00167Q96N53 147 aa9.44□□□□□ -0.9
HDAC6-213ENST00000462730 VPS13DQ5THJ4 4388 aa9.44□□□□□ -0.9
HDAC6-213ENST00000462730 NBDYA0A0U1RRE5 68 aa9.43□□□□□ -0.9
HDAC6-213ENST00000462730 PRO0628Q9UI54 55 aa9.43□□□□□ -0.9
HDAC6-213ENST00000462730 TGP01266 2768 aa9.43□□□□□ -0.9
HDAC6-213ENST00000462730 hADV29S1A0JD25 119 aa9.43□□□□□ -0.9
HDAC6-213ENST00000462730 CCKP06307 115 aa9.43□□□□□ -0.9
HDAC6-213ENST00000462730 C6orf99Q4VX62 202 aa9.43□□□□□ -0.9
HDAC6-213ENST00000462730 IGKV3D-7A0A0C4DH55 119 aa9.42□□□□□ -0.9
HDAC6-213ENST00000462730 PSCAO43653 123 aa9.42□□□□□ -0.9
HDAC6-213ENST00000462730 TLX1NBP0CAT3 122 aa9.41□□□□□ -0.9
HDAC6-213ENST00000462730 WWC2-AS2Q96NR7 200 aa9.41□□□□□ -0.9
HDAC6-213ENST00000462730 Q8N814 137 aa9.41□□□□□ -0.9
HDAC6-213ENST00000462730 H3BQ85 93 aa9.4□□□□□ -0.9
HDAC6-213ENST00000462730 M0R378 163 aa9.4□□□□□ -0.9
HDAC6-213ENST00000462730 TRAV23DV6A0A075B6W5 121 aa9.39□□□□□ -0.91
HDAC6-213ENST00000462730 TMEM256-PLSCR3K7ERE1 68 aa9.39□□□□□ -0.91
HDAC6-213ENST00000462730 C4orf26Q17RF5 130 aa9.39□□□□□ -0.91
HDAC6-213ENST00000462730 HRCT1Q6UXD1 115 aa9.39□□□□□ -0.91
HDAC6-213ENST00000462730 KMT2AQ03164 3969 aa9.38□□□□□ -0.91
HDAC6-213ENST00000462730 A0A087WVE0 104 aa9.37□□□□□ -0.91
HDAC6-213ENST00000462730 M0R2N4 97 aa9.37□□□□□ -0.91
HDAC6-213ENST00000462730 SERTAD4-AS1Q5TG53 156 aa9.37□□□□□ -0.91
HDAC6-213ENST00000462730 DIRC1Q969H9 104 aa9.37□□□□□ -0.91
HDAC6-213ENST00000462730 NKAPP1Q8N9T2 125 aa9.36□□□□□ -0.91
HDAC6-213ENST00000462730 OXTP01178 125 aa9.35□□□□□ -0.91
HDAC6-213ENST00000462730 ZNF73O43830 326 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-213ENST00000462730 LINC00575Q6W349 94 aa9.35□□□□□ -0.91
HDAC6-213ENST00000462730 Q6ZRN7 208 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-213ENST00000462730 PLA2G2DQ9UNK4 145 aa9.34□□□□□ -0.91
HDAC6-213ENST00000462730 C14orf177Q52M58 125 aa9.33□□□□□ -0.92
HDAC6-213ENST00000462730 UBL5Q9BZL1 73 aa9.33□□□□□ -0.92
HDAC6-213ENST00000462730 FAM168BA1KXE4 195 aa9.33□□□□□ -0.92
HDAC6-213ENST00000462730 CNBPP62633 177 aaKnown RBP9.33□□□□□ -0.92
HDAC6-213ENST00000462730 COX7BP24311 80 aa9.32□□□□□ -0.92
HDAC6-213ENST00000462730 C7orf33Q8WU49 177 aa9.32□□□□□ -0.92
HDAC6-213ENST00000462730 LY6G6CO95867 125 aa9.32□□□□□ -0.92
HDAC6-213ENST00000462730 DNAH2Q9P225 4427 aa9.32□□□□□ -0.92
HDAC6-213ENST00000462730 IGLV5-37A0A075B6J1 123 aa9.31□□□□□ -0.92
HDAC6-213ENST00000462730 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-213ENST00000462730 PDE6GP18545 87 aa9.31□□□□□ -0.92
HDAC6-213ENST00000462730 Q6ZR54 194 aa9.31□□□□□ -0.92
HDAC6-213ENST00000462730 CYSTM1Q9H1C7 97 aa9.31□□□□□ -0.92
HDAC6-213ENST00000462730 LRCOL1A6NCL2 159 aa9.3□□□□□ -0.92
HDAC6-213ENST00000462730 EPM2AB3EWF7 344 aa9.3□□□□□ -0.92
HDAC6-213ENST00000462730 TRBV7-6A0A0J9YX20 115 aa9.3□□□□□ -0.92
HDAC6-213ENST00000462730 ELOF1P60002 83 aaKnown RBP9.3□□□□□ -0.92
HDAC6-213ENST00000462730 SEC61GP60059 68 aa9.3□□□□□ -0.92
HDAC6-213ENST00000462730 LINC00476Q8WZB0 136 aa9.3□□□□□ -0.92
HDAC6-213ENST00000462730 LOC110117498A0A087WWA1 95 aa9.29□□□□□ -0.92
HDAC6-213ENST00000462730 GHRHP01286 108 aa9.29□□□□□ -0.92
HDAC6-213ENST00000462730 C3orf84H3BNL1 204 aa9.28□□□□□ -0.92
HDAC6-213ENST00000462730 KRTAP7-1Q8IUC3 87 aa9.28□□□□□ -0.92
HDAC6-213ENST00000462730 DSCR8Q96T75 97 aa9.28□□□□□ -0.92
HDAC6-213ENST00000462730 ALMS1Q8TCU4 4167 aa9.27□□□□□ -0.92
HDAC6-213ENST00000462730 A0A096LNI7 61 aa9.27□□□□□ -0.93
HDAC6-213ENST00000462730 KCNQ1DNQ9H478 68 aa9.27□□□□□ -0.93
HDAC6-213ENST00000462730 TRAV7A0A075B6U4 112 aa9.26□□□□□ -0.93
HDAC6-213ENST00000462730 IGKV2-24A0A0C4DH68 120 aa9.26□□□□□ -0.93
HDAC6-213ENST00000462730 RPL37AP8A6NKH3 93 aa9.26□□□□□ -0.93
HDAC6-213ENST00000462730 RBM3P98179 157 aaKnown RBP9.26□□□□□ -0.93
HDAC6-213ENST00000462730 Q6ZQT0 140 aa9.26□□□□□ -0.93
HDAC6-213ENST00000462730 C16orf90A8MZG2 172 aa9.25□□□□□ -0.93
HDAC6-213ENST00000462730 Q6ZQY7 126 aa9.25□□□□□ -0.93
HDAC6-213ENST00000462730 FAM19A1Q7Z5A9 133 aa9.24□□□□□ -0.93
HDAC6-213ENST00000462730 LINC00528Q8N1L1 170 aa9.24□□□□□ -0.93
HDAC6-213ENST00000462730 V9GYY9 64 aa9.24□□□□□ -0.93
HDAC6-213ENST00000462730 DNAH6Q9C0G6 4158 aa9.24□□□□□ -0.93
HDAC6-213ENST00000462730 IGLV1-50A0A075B6I6 118 aa9.24□□□□□ -0.93
HDAC6-213ENST00000462730 FAM236DA0A1B0GTK5 79 aa9.24□□□□□ -0.93
HDAC6-213ENST00000462730 PRYO14603 147 aa9.24□□□□□ -0.93
HDAC6-213ENST00000462730 FAM236CP0DP71 79 aa9.24□□□□□ -0.93
HDAC6-213ENST00000462730 LINC00336Q6ZUF6 198 aa9.24□□□□□ -0.93
HDAC6-213ENST00000462730 MRPL55Q7Z7F7 128 aaKnown RBP9.24□□□□□ -0.93
HDAC6-213ENST00000462730 SERP1Q9Y6X1 66 aa9.24□□□□□ -0.93
HDAC6-213ENST00000462730 ATP5EP56381 51 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-213ENST00000462730 LAMTOR3Q9UHA4 124 aa9.23□□□□□ -0.93
HDAC6-213ENST00000462730 NDUFC1O43677 76 aa9.23□□□□□ -0.93
HDAC6-213ENST00000462730 CXCL6P80162 114 aa9.23□□□□□ -0.93
HDAC6-213ENST00000462730 A0A087WTM6 91 aa9.22□□□□□ -0.93
HDAC6-213ENST00000462730 C1orf134Q5TEV5 83 aa9.22□□□□□ -0.93
HDAC6-213ENST00000462730 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-213ENST00000462730 KLKP1Q107X0 134 aa9.21□□□□□ -0.94
HDAC6-213ENST00000462730 C9orf163Q8N9P6 203 aa9.21□□□□□ -0.94
HDAC6-213ENST00000462730 HYDINQ4G0P3 5121 aa9.2□□□□□ -0.94
HDAC6-213ENST00000462730 A0A1W2PNN7 141 aa9.2□□□□□ -0.94
HDAC6-213ENST00000462730 CHTF8P0CG12 524 aa9.2□□□□□ -0.94
HDAC6-213ENST00000462730 PKIGQ9Y2B9 76 aa9.19□□□□□ -0.94
HDAC6-213ENST00000462730 ETDCA0A1B0GVM5 59 aa9.19□□□□□ -0.94
HDAC6-213ENST00000462730 SPRR1AP35321 89 aa9.18□□□□□ -0.94
HDAC6-213ENST00000462730 KRTAP4-16G5E9R7 235 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-213ENST00000462730 DNAH17Q9UFH2 4485 aa9.17□□□□□ -0.94
HDAC6-213ENST00000462730 LINC01547P58512 204 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-213ENST00000462730 Q6ZRX8 168 aa9.16□□□□□ -0.94
HDAC6-213ENST00000462730 Q6ZVQ6 151 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms