RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 DAND5Q8N907 189 aa5.37□□□□□ -1.55
DDX39B-216ENST00000462421 NDUFC2O95298 119 aa5.36□□□□□ -1.55
DDX39B-216ENST00000462421 LINC00310P59036 64 aa5.36□□□□□ -1.55
DDX39B-216ENST00000462421 NPC2P61916 151 aa5.36□□□□□ -1.55
DDX39B-216ENST00000462421 LINC01545Q5VT33 79 aa5.36□□□□□ -1.55
DDX39B-216ENST00000462421 LINC00337Q8N6G1 96 aa5.36□□□□□ -1.55
DDX39B-216ENST00000462421 TRAV23DV6A0A075B6W5 121 aa5.35□□□□□ -1.55
DDX39B-216ENST00000462421 A0A0J9YXY3 114 aa5.35□□□□□ -1.55
DDX39B-216ENST00000462421 TRBV10-3A0A0K0K1G6 114 aa5.35□□□□□ -1.55
DDX39B-216ENST00000462421 TSPAN13O95857 204 aa5.35□□□□□ -1.55
DDX39B-216ENST00000462421 KRTAP1-4P0C5Y4 121 aa5.35□□□□□ -1.55
DDX39B-216ENST00000462421 TSPEAR-AS2P59090 65 aa5.35□□□□□ -1.55
DDX39B-216ENST00000462421 KCNQ1DNQ9H478 68 aa5.35□□□□□ -1.55
DDX39B-216ENST00000462421 TIMM17BO60830 172 aa5.34□□□□□ -1.55
DDX39B-216ENST00000462421 C3orf79P0CE67 100 aa5.34□□□□□ -1.55
DDX39B-216ENST00000462421 SNRPEP62304 92 aaKnown RBP5.34□□□□□ -1.55
DDX39B-216ENST00000462421 LINC00518Q8N0U6 118 aa5.34□□□□□ -1.55
DDX39B-216ENST00000462421 LINC00304Q8N9R0 145 aa5.34□□□□□ -1.55
DDX39B-216ENST00000462421 SPANXCQ9NY87 97 aa5.34□□□□□ -1.55
DDX39B-216ENST00000462421 SPAG11AQ6PDA7 123 aa5.33□□□□□ -1.56
DDX39B-216ENST00000462421 SLC25A34Q6PIV7 304 aa5.33□□□□□ -1.56
DDX39B-216ENST00000462421 COA6Q5JTJ3 125 aaKnown RBP5.32□□□□□ -1.56
DDX39B-216ENST00000462421 KRTAP13-1Q8IUC0 172 aa5.32□□□□□ -1.56
DDX39B-216ENST00000462421 LOC107984156A0A0G2JMH3 177 aa5.31□□□□□ -1.56
DDX39B-216ENST00000462421 ZNF73O43830 326 aaPredicted RBP5.31□□□□□ -1.56
DDX39B-216ENST00000462421 GAGE2AQ6NT46 116 aa5.31□□□□□ -1.56
DDX39B-216ENST00000462421 Q6ZVH6 145 aa5.31□□□□□ -1.56
DDX39B-216ENST00000462421 ARL17AQ8IVW1 177 aa5.31□□□□□ -1.56
DDX39B-216ENST00000462421 SMCR5Q8TEV8 140 aa5.31□□□□□ -1.56
DDX39B-216ENST00000462421 SPRR4Q96PI1 79 aa5.31□□□□□ -1.56
DDX39B-216ENST00000462421 SPANXDQ9BXN6 97 aa5.31□□□□□ -1.56
DDX39B-216ENST00000462421 ANAPC11Q9NYG5 84 aa5.31□□□□□ -1.56
DDX39B-216ENST00000462421 A0A087X002 238 aa5.3□□□□□ -1.56
DDX39B-216ENST00000462421 IFITM1P13164 125 aa5.3□□□□□ -1.56
DDX39B-216ENST00000462421 CTAG1AP78358 180 aa5.3□□□□□ -1.56
DDX39B-216ENST00000462421 Q6ZRX8 168 aa5.3□□□□□ -1.56
DDX39B-216ENST00000462421 Q8NDZ9 215 aa5.3□□□□□ -1.56
DDX39B-216ENST00000462421 LINC00308Q8TCZ7 52 aa5.3□□□□□ -1.56
DDX39B-216ENST00000462421 PPDPFQ9H3Y8 114 aa5.3□□□□□ -1.56
DDX39B-216ENST00000462421 A6NDN8 102 aa5.29□□□□□ -1.56
DDX39B-216ENST00000462421 B5MCH6 92 aa5.29□□□□□ -1.56
DDX39B-216ENST00000462421 C9orf153Q5TBE3 101 aa5.29□□□□□ -1.56
DDX39B-216ENST00000462421 ATOH7Q8N100 152 aa5.29□□□□□ -1.56
DDX39B-216ENST00000462421 DHRS4-AS1Q9P1J3 65 aa5.29□□□□□ -1.56
DDX39B-216ENST00000462421 HMCN2Q8NDA2 5059 aa5.29□□□□□ -1.56
DDX39B-216ENST00000462421 IGLV9-49A0A0B4J1Y8 123 aa5.28□□□□□ -1.56
DDX39B-216ENST00000462421 SCGB1D1O95968 90 aa5.28□□□□□ -1.56
DDX39B-216ENST00000462421 IGLV6-57P01721 117 aa5.28□□□□□ -1.56
DDX39B-216ENST00000462421 SPRR1AP35321 89 aa5.28□□□□□ -1.56
DDX39B-216ENST00000462421 TRAV13-2A0A0B4J235 113 aa5.27□□□□□ -1.57
DDX39B-216ENST00000462421 C5orf52A6NGY3 159 aa5.27□□□□□ -1.57
DDX39B-216ENST00000462421 SLC25A20O43772 301 aa5.27□□□□□ -1.57
DDX39B-216ENST00000462421 VAMP3Q15836 100 aa5.27□□□□□ -1.57
DDX39B-216ENST00000462421 ADAMTSL4-AS1Q5T5F5 129 aa5.27□□□□□ -1.57
DDX39B-216ENST00000462421 NHP2Q9NX24 153 aaKnown RBP5.27□□□□□ -1.57
DDX39B-216ENST00000462421 TNXBP22105 4242 aa5.26□□□□□ -1.57
DDX39B-216ENST00000462421 COX7BP24311 80 aa5.26□□□□□ -1.57
DDX39B-216ENST00000462421 LAMTOR3Q9UHA4 124 aa5.26□□□□□ -1.57
DDX39B-216ENST00000462421 SNCGO76070 127 aa5.25□□□□□ -1.57
DDX39B-216ENST00000462421 MOBPQ13875 183 aa5.25□□□□□ -1.57
DDX39B-216ENST00000462421 TAL2Q16559 108 aa5.25□□□□□ -1.57
DDX39B-216ENST00000462421 HIST3H2BBQ8N257 126 aa5.25□□□□□ -1.57
DDX39B-216ENST00000462421 C3orf22Q8N5N4 141 aa5.25□□□□□ -1.57
DDX39B-216ENST00000462421 Q8NBF4 154 aa5.25□□□□□ -1.57
DDX39B-216ENST00000462421 A0A0U1RQV1 116 aa5.24□□□□□ -1.57
DDX39B-216ENST00000462421 A4D1N5 150 aa5.24□□□□□ -1.57
DDX39B-216ENST00000462421 SPINK1P00995 79 aa5.24□□□□□ -1.57
DDX39B-216ENST00000462421 KRTAP13-2Q52LG2 175 aa5.24□□□□□ -1.57
DDX39B-216ENST00000462421 SOSTDC1Q6X4U4 206 aa5.24□□□□□ -1.57
DDX39B-216ENST00000462421 SSBP3-AS1Q7Z2R9 100 aa5.24□□□□□ -1.57
DDX39B-216ENST00000462421 HIST1H2BLQ99880 126 aa5.24□□□□□ -1.57
DDX39B-216ENST00000462421 CDIP1Q9H305 208 aa5.24□□□□□ -1.57
DDX39B-216ENST00000462421 TMEM238LA0A1B0GVL6 79 aa5.23□□□□□ -1.57
DDX39B-216ENST00000462421 A0A1B0GWB2 263 aa5.23□□□□□ -1.57
DDX39B-216ENST00000462421 KRTAP4-16G5E9R7 235 aaPredicted RBP5.23□□□□□ -1.57
DDX39B-216ENST00000462421 C6orf99Q4VX62 202 aa5.23□□□□□ -1.57
DDX39B-216ENST00000462421 LINC00483Q53H64 154 aa5.23□□□□□ -1.57
DDX39B-216ENST00000462421 ANKRD39Q53RE8 183 aa5.23□□□□□ -1.57
DDX39B-216ENST00000462421 TTTY13Q9BZ97 58 aa5.23□□□□□ -1.57
DDX39B-216ENST00000462421 IGLV7-46A0A075B6I9 117 aa5.22□□□□□ -1.57
DDX39B-216ENST00000462421 F8WEM9 126 aa5.22□□□□□ -1.57
DDX39B-216ENST00000462421 MUSTN1Q8IVN3 82 aa5.22□□□□□ -1.57
DDX39B-216ENST00000462421 LITAFQ99732 161 aa5.22□□□□□ -1.57
DDX39B-216ENST00000462421 RETNLBQ9BQ08 111 aa5.22□□□□□ -1.57
DDX39B-216ENST00000462421 LIMD2Q9BT23 127 aa5.22□□□□□ -1.57
DDX39B-216ENST00000462421 TRBV7-6A0A0J9YX20 115 aa5.21□□□□□ -1.58
DDX39B-216ENST00000462421 ELOF1P60002 83 aaKnown RBP5.21□□□□□ -1.58
DDX39B-216ENST00000462421 FP248Q71RG6 208 aaPredicted RBP5.21□□□□□ -1.58
DDX39B-216ENST00000462421 PCP2Q8IVA1 136 aa5.21□□□□□ -1.58
DDX39B-216ENST00000462421 DEFB105AQ8NG35 78 aa5.21□□□□□ -1.58
DDX39B-216ENST00000462421 HIST1H4GQ99525 98 aa5.21□□□□□ -1.58
DDX39B-216ENST00000462421 Q9BRP9 147 aa5.21□□□□□ -1.58
DDX39B-216ENST00000462421 TEX49A0A1B0GTD5 131 aa5.19□□□□□ -1.58
DDX39B-216ENST00000462421 ERC2-IT1O76042 136 aa5.19□□□□□ -1.58
DDX39B-216ENST00000462421 RPS29P62273 56 aaKnown RBP5.18□□□□□ -1.58
DDX39B-216ENST00000462421 RAB37Q96AX2 223 aa5.18□□□□□ -1.58
DDX39B-216ENST00000462421 VAMP8Q9BV40 100 aa5.18□□□□□ -1.58
DDX39B-216ENST00000462421 EIF4EBP3O60516 100 aaPredicted RBP5.17□□□□□ -1.58
DDX39B-216ENST00000462421 BVES-AS1Q5T3Y7 98 aa5.17□□□□□ -1.58
DDX39B-216ENST00000462421 ST20-AS1Q8NBB2 130 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms