RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 TRAV23DV6A0A075B6W5 121 aa10.65□□□□□ -0.7
PDLIM2-215ENST00000456545 HSBP1L1C9JCN9 74 aa10.65□□□□□ -0.7
PDLIM2-215ENST00000456545 IGLV6-57P01721 117 aa10.65□□□□□ -0.7
PDLIM2-215ENST00000456545 HINT1P49773 126 aaPredicted RBP10.65□□□□□ -0.7
PDLIM2-215ENST00000456545 B5MCH6 92 aa10.64□□□□□ -0.71
PDLIM2-215ENST00000456545 KRTAP4-16G5E9R7 235 aaPredicted RBP10.64□□□□□ -0.71
PDLIM2-215ENST00000456545 KRTAP13-2Q52LG2 175 aa10.64□□□□□ -0.71
PDLIM2-215ENST00000456545 COPS9Q8WXC6 57 aa10.64□□□□□ -0.71
PDLIM2-215ENST00000456545 SPRR4Q96PI1 79 aa10.64□□□□□ -0.71
PDLIM2-215ENST00000456545 JOSD1Q15040 202 aaPredicted RBP10.63□□□□□ -0.71
PDLIM2-215ENST00000456545 LINC00518Q8N0U6 118 aa10.62□□□□□ -0.71
PDLIM2-215ENST00000456545 ZNF73O43830 326 aaPredicted RBP10.61□□□□□ -0.71
PDLIM2-215ENST00000456545 PRR4Q16378 134 aa10.61□□□□□ -0.71
PDLIM2-215ENST00000456545 PCP2Q8IVA1 136 aa10.61□□□□□ -0.71
PDLIM2-215ENST00000456545 SPANXDQ9BXN6 97 aa10.61□□□□□ -0.71
PDLIM2-215ENST00000456545 PPDPFQ9H3Y8 114 aa10.61□□□□□ -0.71
PDLIM2-215ENST00000456545 Q6ZRX8 168 aa10.6□□□□□ -0.71
PDLIM2-215ENST00000456545 LINC00304Q8N9R0 145 aa10.6□□□□□ -0.71
PDLIM2-215ENST00000456545 GAGE2AQ6NT46 116 aa10.59□□□□□ -0.71
PDLIM2-215ENST00000456545 SCGB1D1O95968 90 aa10.58□□□□□ -0.72
PDLIM2-215ENST00000456545 IFITM1P13164 125 aa10.58□□□□□ -0.72
PDLIM2-215ENST00000456545 Q6ZVH6 145 aa10.58□□□□□ -0.72
PDLIM2-215ENST00000456545 C3orf22Q8N5N4 141 aa10.58□□□□□ -0.72
PDLIM2-215ENST00000456545 C4orf48Q5BLP8 95 aa10.56□□□□□ -0.72
PDLIM2-215ENST00000456545 Q9BRP9 147 aa10.56□□□□□ -0.72
PDLIM2-215ENST00000456545 ERC2-IT1O76042 136 aa10.55□□□□□ -0.72
PDLIM2-215ENST00000456545 MUSTN1Q8IVN3 82 aa10.55□□□□□ -0.72
PDLIM2-215ENST00000456545 A6NDN8 102 aa10.53□□□□□ -0.72
PDLIM2-215ENST00000456545 C5orf52A6NGY3 159 aa10.53□□□□□ -0.72
PDLIM2-215ENST00000456545 SPAG11AQ6PDA7 123 aa10.51□□□□□ -0.73
PDLIM2-215ENST00000456545 IGLV9-49A0A0B4J1Y8 123 aa10.5□□□□□ -0.73
PDLIM2-215ENST00000456545 COX7BP24311 80 aa10.5□□□□□ -0.73
PDLIM2-215ENST00000456545 LINC00483Q53H64 154 aa10.5□□□□□ -0.73
PDLIM2-215ENST00000456545 C6orf99Q4VX62 202 aa10.49□□□□□ -0.73
PDLIM2-215ENST00000456545 DHRS4-AS1Q9P1J3 65 aa10.49□□□□□ -0.73
PDLIM2-215ENST00000456545 UBR4Q5T4S7 5183 aa10.48□□□□□ -0.73
PDLIM2-215ENST00000456545 CTAG1AP78358 180 aa10.48□□□□□ -0.73
PDLIM2-215ENST00000456545 Q8NBF4 154 aa10.48□□□□□ -0.73
PDLIM2-215ENST00000456545 TRAV13-2A0A0B4J235 113 aa10.47□□□□□ -0.73
PDLIM2-215ENST00000456545 MOBPQ13875 183 aa10.46□□□□□ -0.73
PDLIM2-215ENST00000456545 ST20-AS1Q8NBB2 130 aa10.46□□□□□ -0.73
PDLIM2-215ENST00000456545 RETNLBQ9BQ08 111 aa10.46□□□□□ -0.73
PDLIM2-215ENST00000456545 ELOF1P60002 83 aaKnown RBP10.44□□□□□ -0.74
PDLIM2-215ENST00000456545 C9orf153Q5TBE3 101 aa10.44□□□□□ -0.74
PDLIM2-215ENST00000456545 SSBP3-AS1Q7Z2R9 100 aa10.44□□□□□ -0.74
PDLIM2-215ENST00000456545 LRP2P98164 4655 aa10.44□□□□□ -0.74
PDLIM2-215ENST00000456545 TRBV7-6A0A0J9YX20 115 aa10.42□□□□□ -0.74
PDLIM2-215ENST00000456545 TAL2Q16559 108 aa10.42□□□□□ -0.74
PDLIM2-215ENST00000456545 SLC25A34Q6PIV7 304 aa10.42□□□□□ -0.74
PDLIM2-215ENST00000456545 A0A1B0GWB2 263 aa10.41□□□□□ -0.74
PDLIM2-215ENST00000456545 SPINK1P00995 79 aa10.41□□□□□ -0.74
PDLIM2-215ENST00000456545 HIST1H4GQ99525 98 aa10.41□□□□□ -0.74
PDLIM2-215ENST00000456545 COX8AP10176 69 aa10.4□□□□□ -0.74
PDLIM2-215ENST00000456545 DEFB105AQ8NG35 78 aa10.4□□□□□ -0.74
PDLIM2-215ENST00000456545 A4D1N5 150 aa10.39□□□□□ -0.75
PDLIM2-215ENST00000456545 VAMP3Q15836 100 aa10.39□□□□□ -0.75
PDLIM2-215ENST00000456545 LAMTOR3Q9UHA4 124 aa10.39□□□□□ -0.75
PDLIM2-215ENST00000456545 SPATA45Q537H7 98 aa10.38□□□□□ -0.75
PDLIM2-215ENST00000456545 SMIM11BQ8TCY0 68 aa10.38□□□□□ -0.75
PDLIM2-215ENST00000456545 PAM16Q9Y3D7 125 aa10.38□□□□□ -0.75
PDLIM2-215ENST00000456545 IGLV7-46A0A075B6I9 117 aa10.37□□□□□ -0.75
PDLIM2-215ENST00000456545 C14orf144Q96I85 54 aa10.37□□□□□ -0.75
PDLIM2-215ENST00000456545 VAMP8Q9BV40 100 aa10.37□□□□□ -0.75
PDLIM2-215ENST00000456545 NHP2Q9NX24 153 aaKnown RBP10.36□□□□□ -0.75
PDLIM2-215ENST00000456545 DLEU1O43261 78 aa10.35□□□□□ -0.75
PDLIM2-215ENST00000456545 SLC25A20O43772 301 aa10.35□□□□□ -0.75
PDLIM2-215ENST00000456545 SPRR1BP22528 89 aa10.35□□□□□ -0.75
PDLIM2-215ENST00000456545 TEX49A0A1B0GTD5 131 aa10.34□□□□□ -0.75
PDLIM2-215ENST00000456545 LPAP08519 4548 aa10.33□□□□□ -0.76
PDLIM2-215ENST00000456545 C12orf57Q99622 126 aa10.33□□□□□ -0.76
PDLIM2-215ENST00000456545 Q1RN00 199 aa10.31□□□□□ -0.76
PDLIM2-215ENST00000456545 CDIP1Q9H305 208 aa10.31□□□□□ -0.76
PDLIM2-215ENST00000456545 FP248Q71RG6 208 aaPredicted RBP10.3□□□□□ -0.76
PDLIM2-215ENST00000456545 TMA7Q9Y2S6 64 aaKnown RBP10.3□□□□□ -0.76
PDLIM2-215ENST00000456545 RPS29P62273 56 aaKnown RBP10.29□□□□□ -0.76
PDLIM2-215ENST00000456545 RAB37Q96AX2 223 aa10.28□□□□□ -0.76
PDLIM2-215ENST00000456545 HIGD1BQ9P298 99 aa10.28□□□□□ -0.76
PDLIM2-215ENST00000456545 TPRXLQ17RH7 258 aa10.27□□□□□ -0.77
PDLIM2-215ENST00000456545 HRCT1Q6UXD1 115 aa10.27□□□□□ -0.77
PDLIM2-215ENST00000456545 H7C2G1 150 aa10.26□□□□□ -0.77
PDLIM2-215ENST00000456545 PRO1933Q9H354 126 aa10.26□□□□□ -0.77
PDLIM2-215ENST00000456545 LINC00575Q6W349 94 aa10.25□□□□□ -0.77
PDLIM2-215ENST00000456545 Q8N377 158 aa10.25□□□□□ -0.77
PDLIM2-215ENST00000456545 IGLV5-48A0A075B6I7 105 aa10.24□□□□□ -0.77
PDLIM2-215ENST00000456545 hADV29S1A0JD25 119 aa10.24□□□□□ -0.77
PDLIM2-215ENST00000456545 BVES-AS1Q5T3Y7 98 aa10.24□□□□□ -0.77
PDLIM2-215ENST00000456545 CFC1BP0CG36 223 aa10.22□□□□□ -0.77
PDLIM2-215ENST00000456545 CFC1P0CG37 223 aa10.22□□□□□ -0.77
PDLIM2-215ENST00000456545 LINC01547P58512 204 aaPredicted RBP10.22□□□□□ -0.77
PDLIM2-215ENST00000456545 LIMD2Q9BT23 127 aa10.22□□□□□ -0.77
PDLIM2-215ENST00000456545 F8WEM9 126 aa10.21□□□□□ -0.77
PDLIM2-215ENST00000456545 C2orf91Q6ZV80 131 aa10.21□□□□□ -0.77
PDLIM2-215ENST00000456545 SMIM29Q86T20 159 aa10.21□□□□□ -0.77
PDLIM2-215ENST00000456545 TMEM238LA0A1B0GVL6 79 aa10.2□□□□□ -0.78
PDLIM2-215ENST00000456545 A6NJY4 79 aa10.2□□□□□ -0.78
PDLIM2-215ENST00000456545 SNCGO76070 127 aa10.2□□□□□ -0.78
PDLIM2-215ENST00000456545 PYY3Q5JQD4 70 aa10.2□□□□□ -0.78
PDLIM2-215ENST00000456545 CEND1Q8N111 149 aa10.2□□□□□ -0.78
PDLIM2-215ENST00000456545 RNF213Q63HN8 5207 aa10.2□□□□□ -0.78
PDLIM2-215ENST00000456545 Q6ZQY7 126 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms