RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 Q6ZRP5 223 aa8.99□□□□□ -0.97
PTPRE-204ENST00000455661 C15orf56Q8N910 161 aa8.99□□□□□ -0.97
PTPRE-204ENST00000455661 KRTAP26-1Q6PEX3 210 aa8.98□□□□□ -0.97
PTPRE-204ENST00000455661 WFDC10BQ8IUB3 73 aa8.98□□□□□ -0.97
PTPRE-204ENST00000455661 F8WDY8 70 aa8.98□□□□□ -0.97
PTPRE-204ENST00000455661 DHRS4-AS1Q9P1J3 65 aa8.98□□□□□ -0.97
PTPRE-204ENST00000455661 LCE6AA0A183 80 aa8.97□□□□□ -0.97
PTPRE-204ENST00000455661 hDV103S1A0JD37 113 aa8.97□□□□□ -0.97
PTPRE-204ENST00000455661 CCDC168Q8NDH2 2452 aa8.96□□□□□ -0.97
PTPRE-204ENST00000455661 ZNF462Q96JM2 2506 aa8.96□□□□□ -0.97
PTPRE-204ENST00000455661 PIEZO1Q92508 2521 aa8.95□□□□□ -0.98
PTPRE-204ENST00000455661 A0A1W2PNM2 257 aa8.95□□□□□ -0.98
PTPRE-204ENST00000455661 SYCNQ0VAF6 134 aa8.95□□□□□ -0.98
PTPRE-204ENST00000455661 C1orf137Q5JT78 98 aa8.95□□□□□ -0.98
PTPRE-204ENST00000455661 C7orf33Q8WU49 177 aa8.95□□□□□ -0.98
PTPRE-204ENST00000455661 ETDCA0A1B0GVM5 59 aa8.94□□□□□ -0.98
PTPRE-204ENST00000455661 FLNAP21333 2647 aaKnown RBP8.94□□□□□ -0.98
PTPRE-204ENST00000455661 V9GYY9 64 aa8.93□□□□□ -0.98
PTPRE-204ENST00000455661 Q8NBF4 154 aa8.93□□□□□ -0.98
PTPRE-204ENST00000455661 SERTAD4-AS1Q5TG53 156 aa8.92□□□□□ -0.98
PTPRE-204ENST00000455661 Q6ZRX8 168 aa8.92□□□□□ -0.98
PTPRE-204ENST00000455661 UBR5O95071 2799 aaPredicted RBP8.92□□□□□ -0.98
PTPRE-204ENST00000455661 IGKV2D-24A0A075B6R9 120 aa8.92□□□□□ -0.98
PTPRE-204ENST00000455661 H3BNG1 76 aa8.92□□□□□ -0.98
PTPRE-204ENST00000455661 C1orf64Q8NEQ6 169 aa8.92□□□□□ -0.98
PTPRE-204ENST00000455661 Q1T7F1 81 aa8.91□□□□□ -0.98
PTPRE-204ENST00000455661 ZCCHC13Q8WW36 166 aaKnown RBP8.91□□□□□ -0.98
PTPRE-204ENST00000455661 LRCOL1A6NCL2 159 aa8.9□□□□□ -0.98
PTPRE-204ENST00000455661 TNP2Q05952 138 aa8.9□□□□□ -0.98
PTPRE-204ENST00000455661 SPRR4Q96PI1 79 aa8.9□□□□□ -0.98
PTPRE-204ENST00000455661 DSCR10P59022 87 aa8.89□□□□□ -0.99
PTPRE-204ENST00000455661 RPL37AP8A6NKH3 93 aa8.88□□□□□ -0.99
PTPRE-204ENST00000455661 Q9BRP9 147 aa8.88□□□□□ -0.99
PTPRE-204ENST00000455661 K7EQZ3 153 aa8.88□□□□□ -0.99
PTPRE-204ENST00000455661 PLA2G2DQ9UNK4 145 aa8.88□□□□□ -0.99
PTPRE-204ENST00000455661 HIVEP2P31629 2446 aa8.87□□□□□ -0.99
PTPRE-204ENST00000455661 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.87□□□□□ -0.99
PTPRE-204ENST00000455661 ANK3Q12955 4377 aaKnown RBP8.87□□□□□ -0.99
PTPRE-204ENST00000455661 PRR15Q8IV56 129 aa8.87□□□□□ -0.99
PTPRE-204ENST00000455661 ST20-AS1Q8NBB2 130 aa8.87□□□□□ -0.99
PTPRE-204ENST00000455661 HCG22E2RYF7 251 aa8.86□□□□□ -0.99
PTPRE-204ENST00000455661 MTORP42345 2549 aa8.86□□□□□ -0.99
PTPRE-204ENST00000455661 IGLV1-50A0A075B6I6 118 aa8.86□□□□□ -0.99
PTPRE-204ENST00000455661 KRTAP4-16G5E9R7 235 aaPredicted RBP8.86□□□□□ -0.99
PTPRE-204ENST00000455661 CYP4F30PQ9H0H9 118 aa8.86□□□□□ -0.99
PTPRE-204ENST00000455661 NDUFB1O75438 58 aa8.85□□□□□ -0.99
PTPRE-204ENST00000455661 TLX1NBP0CAT3 122 aa8.85□□□□□ -0.99
PTPRE-204ENST00000455661 SPRR1AP35321 89 aa8.85□□□□□ -0.99
PTPRE-204ENST00000455661 LINC01556Q5JQF7 62 aa8.85□□□□□ -0.99
PTPRE-204ENST00000455661 ACANP16112 2415 aa8.83□□□□□ -1
PTPRE-204ENST00000455661 IGLV5-37A0A075B6J1 123 aa8.83□□□□□ -1
PTPRE-204ENST00000455661 UBE2BP63146 152 aa8.82□□□□□ -1
PTPRE-204ENST00000455661 PSCAO43653 123 aa8.81□□□□□ -1
PTPRE-204ENST00000455661 FAM168BA1KXE4 195 aa8.81□□□□□ -1
PTPRE-204ENST00000455661 PSPHP1O15172 72 aa8.81□□□□□ -1
PTPRE-204ENST00000455661 MP68P56378 58 aa8.81□□□□□ -1
PTPRE-204ENST00000455661 SEC61GP60059 68 aa8.81□□□□□ -1
PTPRE-204ENST00000455661 PRR4Q16378 134 aa8.81□□□□□ -1
PTPRE-204ENST00000455661 TRAV22A0A0B4J277 110 aa8.8□□□□□ -1
PTPRE-204ENST00000455661 SMR3AQ99954 134 aa8.8□□□□□ -1
PTPRE-204ENST00000455661 LINC00476Q8WZB0 136 aa8.79□□□□□ -1
PTPRE-204ENST00000455661 MRPL55Q7Z7F7 128 aaKnown RBP8.78□□□□□ -1
PTPRE-204ENST00000455661 PMAIP1Q13794 54 aa8.77□□□□□ -1.01
PTPRE-204ENST00000455661 RETNQ9HD89 108 aa8.77□□□□□ -1.01
PTPRE-204ENST00000455661 WFDC13Q8IUB5 93 aa8.76□□□□□ -1.01
PTPRE-204ENST00000455661 REG3GQ6UW15 175 aa8.75□□□□□ -1.01
PTPRE-204ENST00000455661 B9D2Q9BPU9 175 aa8.75□□□□□ -1.01
PTPRE-204ENST00000455661 J3QL48 77 aa8.74□□□□□ -1.01
PTPRE-204ENST00000455661 USP24Q9UPU5 2620 aa8.74□□□□□ -1.01
PTPRE-204ENST00000455661 VWFP04275 2813 aa8.74□□□□□ -1.01
PTPRE-204ENST00000455661 DEFB131BA0A096LNP1 70 aa8.74□□□□□ -1.01
PTPRE-204ENST00000455661 DNAH10OSP0CZ25 163 aa8.74□□□□□ -1.01
PTPRE-204ENST00000455661 DEFB116Q30KQ4 102 aa8.74□□□□□ -1.01
PTPRE-204ENST00000455661 IGFL1Q6UW32 110 aa8.74□□□□□ -1.01
PTPRE-204ENST00000455661 KRTAP7-1Q8IUC3 87 aa8.74□□□□□ -1.01
PTPRE-204ENST00000455661 LINC00208Q96KT6 92 aa8.73□□□□□ -1.01
PTPRE-204ENST00000455661 PRB2P02812 416 aaPredicted RBP8.72□□□□□ -1.01
PTPRE-204ENST00000455661 PDZD2O15018 2839 aa8.72□□□□□ -1.01
PTPRE-204ENST00000455661 A8MUN3 132 aa8.71□□□□□ -1.01
PTPRE-204ENST00000455661 A0A087WSZ3 146 aa8.71□□□□□ -1.02
PTPRE-204ENST00000455661 A0A0G2JQZ4 141 aa8.7□□□□□ -1.02
PTPRE-204ENST00000455661 A0A1W2PNN7 141 aa8.7□□□□□ -1.02
PTPRE-204ENST00000455661 H3BPC8 53 aa8.7□□□□□ -1.02
PTPRE-204ENST00000455661 SPANXA2-OT1Q8N9U9 137 aa8.7□□□□□ -1.02
PTPRE-204ENST00000455661 H0Y9P7 68 aa8.68□□□□□ -1.02
PTPRE-204ENST00000455661 C11orf45Q8TAV5 145 aa8.68□□□□□ -1.02
PTPRE-204ENST00000455661 HIVEP1P15822 2718 aa8.68□□□□□ -1.02
PTPRE-204ENST00000455661 IGLV8-61A0A075B6I0 122 aa8.67□□□□□ -1.02
PTPRE-204ENST00000455661 KRTAP29-1A8MX34 341 aaPredicted RBP8.67□□□□□ -1.02
PTPRE-204ENST00000455661 RPL37AP61513 92 aaKnown RBP8.67□□□□□ -1.02
PTPRE-204ENST00000455661 CASC10Q5T4H9 136 aa8.67□□□□□ -1.02
PTPRE-204ENST00000455661 CASC2Q6XLA1 102 aa8.67□□□□□ -1.02
PTPRE-204ENST00000455661 LIMD2Q9BT23 127 aa8.66□□□□□ -1.02
PTPRE-204ENST00000455661 UNC79Q9P2D8 2635 aa8.66□□□□□ -1.02
PTPRE-204ENST00000455661 INAFM1C9JVW0 142 aa8.65□□□□□ -1.02
PTPRE-204ENST00000455661 Q5VV11 94 aa8.65□□□□□ -1.02
PTPRE-204ENST00000455661 UBE2AP49459 152 aa8.64□□□□□ -1.03
PTPRE-204ENST00000455661 PRLHP81277 87 aa8.63□□□□□ -1.03
PTPRE-204ENST00000455661 Q8N9P0 234 aaPredicted RBP8.63□□□□□ -1.03
PTPRE-204ENST00000455661 CHKB-CPT1BH3BT56 60 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 222.2 ms