RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 G3V318 75 aa1.34□□□□□ -2.19
HMGB1P26-201ENST00000452520 SMIM4Q8WVI0 70 aa1.34□□□□□ -2.19
HMGB1P26-201ENST00000452520 VAMP8Q9BV40 100 aa1.34□□□□□ -2.19
HMGB1P26-201ENST00000452520 MYH4Q9Y623 1939 aa1.34□□□□□ -2.2
HMGB1P26-201ENST00000452520 SPENQ96T58 3664 aaKnown RBP1.34□□□□□ -2.2
HMGB1P26-201ENST00000452520 PDCD11Q14690 1871 aaKnown RBP1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 SPTBN1Q01082 2364 aaKnown RBP1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 SPG11Q96JI7 2443 aa1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 C10orf142B7Z368 130 aa1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 UQCR11O14957 56 aa1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 SFT2D2O95562 160 aa1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 COX6CP09669 75 aa1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 TRAPPC2P0DI81 140 aa1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 TRAPPC2BP0DI82 140 aa1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 NPVFQ9HCQ7 196 aa1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 ARL2-SNX15V9GYD0 113 aa1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 TENM1Q9UKZ4 2725 aa1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 CSMD2Q7Z408 3487 aa1.33□□□□□ -2.2
HMGB1P26-201ENST00000452520 HIVEP1P15822 2718 aa1.32□□□□□ -2.2
HMGB1P26-201ENST00000452520 TSC2P49815 1807 aa1.32□□□□□ -2.2
HMGB1P26-201ENST00000452520 DEFB133Q30KQ1 61 aa1.32□□□□□ -2.2
HMGB1P26-201ENST00000452520 NXT2Q9NPJ8 142 aaKnown RBP1.32□□□□□ -2.2
HMGB1P26-201ENST00000452520 USP9YO00507 2555 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P26-201ENST00000452520 OTOGQ6ZRI0 2925 aa1.32□□□□□ -2.2
HMGB1P26-201ENST00000452520 CENPEQ02224 2701 aa1.31□□□□□ -2.2
HMGB1P26-201ENST00000452520 MYO7BQ6PIF6 2116 aa1.31□□□□□ -2.2
HMGB1P26-201ENST00000452520 MTORP42345 2549 aa1.31□□□□□ -2.2
HMGB1P26-201ENST00000452520 NBEAL1Q6ZS30 2694 aa1.31□□□□□ -2.2
HMGB1P26-201ENST00000452520 PROK2Q9HC23 129 aa1.31□□□□□ -2.2
HMGB1P26-201ENST00000452520 NF1P21359 2839 aa1.31□□□□□ -2.2
HMGB1P26-201ENST00000452520 TLN1Q9Y490 2541 aaKnown RBP1.31□□□□□ -2.2
HMGB1P26-201ENST00000452520 FLNCQ14315 2725 aa1.31□□□□□ -2.2
HMGB1P26-201ENST00000452520 CSPG4Q6UVK1 2322 aa1.31□□□□□ -2.2
HMGB1P26-201ENST00000452520 APOC3P02656 99 aa1.3□□□□□ -2.2
HMGB1P26-201ENST00000452520 IGLC1P0CG04 106 aa1.3□□□□□ -2.2
HMGB1P26-201ENST00000452520 APCP25054 2843 aa1.3□□□□□ -2.2
HMGB1P26-201ENST00000452520 TACC2O95359 2948 aa1.3□□□□□ -2.2
HMGB1P26-201ENST00000452520 CSMD1Q96PZ7 3565 aa1.3□□□□□ -2.2
HMGB1P26-201ENST00000452520 ANKHD1Q8IWZ3 2542 aaKnown RBP1.3□□□□□ -2.2
HMGB1P26-201ENST00000452520 ATRQ13535 2644 aa1.3□□□□□ -2.2
HMGB1P26-201ENST00000452520 PKDREJQ9NTG1 2253 aa1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 ATOX1O00244 68 aa1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 NDUFC1O43677 76 aa1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 HMGA1P17096 107 aaKnown RBP1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 GNG2P59768 71 aa1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 FAM223AQ8IWN6 122 aa1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 FAM103A1Q9BTL3 118 aaKnown RBP1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 Q9H521 79 aa1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 LINC00472Q9H8W2 130 aa1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 FAIMQ9NVQ4 179 aa1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 BSNQ9UPA5 3926 aa1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 PLIN4Q96Q06 1357 aa1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 JMJD1CQ15652 2540 aa1.29□□□□□ -2.2
HMGB1P26-201ENST00000452520 TCHHQ07283 1943 aa1.28□□□□□ -2.2
HMGB1P26-201ENST00000452520 HIVEP3Q5T1R4 2406 aa1.28□□□□□ -2.2
HMGB1P26-201ENST00000452520 CCDC168Q8NDH2 2452 aa1.28□□□□□ -2.2
HMGB1P26-201ENST00000452520 MAP1AP78559 2803 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P26-201ENST00000452520 A0A0D9SFI3 127 aa1.28□□□□□ -2.2
HMGB1P26-201ENST00000452520 A0A0G2JND7 137 aa1.28□□□□□ -2.2
HMGB1P26-201ENST00000452520 FDCSPQ8NFU4 85 aa1.28□□□□□ -2.2
HMGB1P26-201ENST00000452520 CACFD1Q9UGQ2 172 aa1.28□□□□□ -2.2
HMGB1P26-201ENST00000452520 U3KQA8 63 aa1.28□□□□□ -2.2
HMGB1P26-201ENST00000452520 DCHS2Q6V1P9 2916 aa1.28□□□□□ -2.2
HMGB1P26-201ENST00000452520 ANK3Q12955 4377 aaKnown RBP1.28□□□□□ -2.21
HMGB1P26-201ENST00000452520 FCGBPQ9Y6R7 5405 aaPredicted RBP1.28□□□□□ -2.21
HMGB1P26-201ENST00000452520 RYR3Q15413 4870 aa1.27□□□□□ -2.21
HMGB1P26-201ENST00000452520 ACANP16112 2415 aa1.27□□□□□ -2.21
HMGB1P26-201ENST00000452520 M0R3E3 92 aa1.27□□□□□ -2.21
HMGB1P26-201ENST00000452520 NMBP08949 121 aa1.27□□□□□ -2.21
HMGB1P26-201ENST00000452520 FAUP35544 74 aaKnown RBP1.27□□□□□ -2.21
HMGB1P26-201ENST00000452520 COX17Q14061 63 aa1.27□□□□□ -2.21
HMGB1P26-201ENST00000452520 SERP2Q8N6R1 65 aa1.27□□□□□ -2.21
HMGB1P26-201ENST00000452520 C10orf95Q9H7T3 257 aa1.27□□□□□ -2.21
HMGB1P26-201ENST00000452520 PKD1L1Q8TDX9 2849 aa1.27□□□□□ -2.21
HMGB1P26-201ENST00000452520 CADP27708 2225 aa1.27□□□□□ -2.21
HMGB1P26-201ENST00000452520 BIRC6Q9NR09 4857 aa1.27□□□□□ -2.21
HMGB1P26-201ENST00000452520 NBEAL2Q6ZNJ1 2754 aa1.26□□□□□ -2.21
HMGB1P26-201ENST00000452520 PIN1P1O15428 100 aa1.26□□□□□ -2.21
HMGB1P26-201ENST00000452520 UQCRHP07919 91 aa1.26□□□□□ -2.21
HMGB1P26-201ENST00000452520 PRB3Q04118 309 aaPredicted RBP1.26□□□□□ -2.21
HMGB1P26-201ENST00000452520 STAB1Q9NY15 2570 aa1.26□□□□□ -2.21
HMGB1P26-201ENST00000452520 AKAP6Q13023 2319 aa1.26□□□□□ -2.21
HMGB1P26-201ENST00000452520 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.26□□□□□ -2.21
HMGB1P26-201ENST00000452520 PRRC2CQ9Y520 2896 aaKnown RBP1.26□□□□□ -2.21
HMGB1P26-201ENST00000452520 COL6A5A8TX70 2615 aa1.25□□□□□ -2.21
HMGB1P26-201ENST00000452520 FLNAP21333 2647 aaKnown RBP1.25□□□□□ -2.21
HMGB1P26-201ENST00000452520 NOTCH1P46531 2555 aa1.25□□□□□ -2.21
HMGB1P26-201ENST00000452520 MGPP08493 103 aa1.25□□□□□ -2.21
HMGB1P26-201ENST00000452520 TRGV9Q99603 122 aa1.25□□□□□ -2.21
HMGB1P26-201ENST00000452520 V9GYS6 101 aa1.25□□□□□ -2.21
HMGB1P26-201ENST00000452520 TGP01266 2768 aa1.25□□□□□ -2.21
HMGB1P26-201ENST00000452520 TLN2Q9Y4G6 2542 aa1.24□□□□□ -2.21
HMGB1P26-201ENST00000452520 SPTY2D1-AS1A0A0U1RR47 76 aa1.24□□□□□ -2.21
HMGB1P26-201ENST00000452520 FAM223BA6NKX1 122 aa1.24□□□□□ -2.21
HMGB1P26-201ENST00000452520 H7BZZ5 65 aa1.24□□□□□ -2.21
HMGB1P26-201ENST00000452520 ASIPP42127 132 aa1.24□□□□□ -2.21
HMGB1P26-201ENST00000452520 UBE2DNLQ8IWF7 75 aa1.24□□□□□ -2.21
HMGB1P26-201ENST00000452520 RYR1P21817 5038 aa1.24□□□□□ -2.21
HMGB1P26-201ENST00000452520 SONP18583 2426 aaKnown RBP1.24□□□□□ -2.21
HMGB1P26-201ENST00000452520 TRBV7-7A0A0K0K1E9 115 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms