RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 LINC00476Q8WZB0 136 aa9.43□□□□□ -0.9
SMARCA4-204ENST00000444061 LINC00336Q6ZUF6 198 aa9.42□□□□□ -0.9
SMARCA4-204ENST00000444061 CIRBP-AS1Q8TBR5 109 aa9.42□□□□□ -0.9
SMARCA4-204ENST00000444061 A0A087WTM6 91 aa9.42□□□□□ -0.9
SMARCA4-204ENST00000444061 CHTF8P0CG12 524 aa9.42□□□□□ -0.9
SMARCA4-204ENST00000444061 CASC10Q5T4H9 136 aa9.42□□□□□ -0.9
SMARCA4-204ENST00000444061 A0A087WYN8 130 aa9.41□□□□□ -0.9
SMARCA4-204ENST00000444061 LINC00337Q8N6G1 96 aa9.41□□□□□ -0.9
SMARCA4-204ENST00000444061 PHF5AQ7RTV0 110 aaKnown RBP9.4□□□□□ -0.9
SMARCA4-204ENST00000444061 SMCR5Q8TEV8 140 aa9.39□□□□□ -0.91
SMARCA4-204ENST00000444061 Q6ZRP5 223 aa9.39□□□□□ -0.91
SMARCA4-204ENST00000444061 LINC00846Q9NV44 126 aa9.38□□□□□ -0.91
SMARCA4-204ENST00000444061 PRO0628Q9UI54 55 aa9.38□□□□□ -0.91
SMARCA4-204ENST00000444061 Q9BRP9 147 aa9.38□□□□□ -0.91
SMARCA4-204ENST00000444061 LRBAP50851 2863 aa9.37□□□□□ -0.91
SMARCA4-204ENST00000444061 IGKV4-1P06312 121 aa9.36□□□□□ -0.91
SMARCA4-204ENST00000444061 PRR15LQ9BU68 103 aa9.36□□□□□ -0.91
SMARCA4-204ENST00000444061 LOC400499M0QZD8 3231 aa9.36□□□□□ -0.91
SMARCA4-204ENST00000444061 SEC61GP60059 68 aa9.36□□□□□ -0.91
SMARCA4-204ENST00000444061 KRTAP21-3Q3LHN1 58 aa9.36□□□□□ -0.91
SMARCA4-204ENST00000444061 A6NED7 52 aa9.35□□□□□ -0.91
SMARCA4-204ENST00000444061 CXCL6P80162 114 aa9.35□□□□□ -0.91
SMARCA4-204ENST00000444061 C15orf56Q8N910 161 aa9.35□□□□□ -0.91
SMARCA4-204ENST00000444061 LINC00575Q6W349 94 aa9.34□□□□□ -0.91
SMARCA4-204ENST00000444061 PLA2G1BP04054 148 aaKnown RBP9.33□□□□□ -0.92
SMARCA4-204ENST00000444061 C9orf163Q8N9P6 203 aa9.33□□□□□ -0.92
SMARCA4-204ENST00000444061 KMT2BQ9UMN6 2715 aaPredicted RBP9.32□□□□□ -0.92
SMARCA4-204ENST00000444061 TMEM254Q8TBM7 123 aa9.32□□□□□ -0.92
SMARCA4-204ENST00000444061 ZNF575Q86XF7 245 aa9.32□□□□□ -0.92
SMARCA4-204ENST00000444061 SOSTDC1Q6X4U4 206 aa9.32□□□□□ -0.92
SMARCA4-204ENST00000444061 Q6ZVQ6 151 aa9.31□□□□□ -0.92
SMARCA4-204ENST00000444061 LINC01547P58512 204 aaPredicted RBP9.3□□□□□ -0.92
SMARCA4-204ENST00000444061 FAM30AQ9NZY2 134 aa9.3□□□□□ -0.92
SMARCA4-204ENST00000444061 TRBV7-6A0A0J9YX20 115 aa9.3□□□□□ -0.92
SMARCA4-204ENST00000444061 KIAA0087Q14695 138 aa9.29□□□□□ -0.92
SMARCA4-204ENST00000444061 RPL37AP61513 92 aaKnown RBP9.29□□□□□ -0.92
SMARCA4-204ENST00000444061 ZANQ9Y493 2812 aa9.29□□□□□ -0.92
SMARCA4-204ENST00000444061 WFDC13Q8IUB5 93 aa9.28□□□□□ -0.92
SMARCA4-204ENST00000444061 PMAIP1Q13794 54 aa9.28□□□□□ -0.92
SMARCA4-204ENST00000444061 MYO15AQ9UKN7 3530 aa9.27□□□□□ -0.92
SMARCA4-204ENST00000444061 FAM168BA1KXE4 195 aa9.27□□□□□ -0.93
SMARCA4-204ENST00000444061 VPREB1P12018 145 aa9.27□□□□□ -0.93
SMARCA4-204ENST00000444061 CFAP47Q6ZTR5 3102 aa9.27□□□□□ -0.93
SMARCA4-204ENST00000444061 Q8N9L7 120 aa9.27□□□□□ -0.93
SMARCA4-204ENST00000444061 TENM4Q6N022 2769 aa9.26□□□□□ -0.93
SMARCA4-204ENST00000444061 EPM2AB3EWF7 344 aa9.26□□□□□ -0.93
SMARCA4-204ENST00000444061 TNP2Q05952 138 aa9.26□□□□□ -0.93
SMARCA4-204ENST00000444061 PRR4Q16378 134 aa9.24□□□□□ -0.93
SMARCA4-204ENST00000444061 Q6ZRX8 168 aa9.24□□□□□ -0.93
SMARCA4-204ENST00000444061 SERTAD4-AS1Q5TG53 156 aa9.24□□□□□ -0.93
SMARCA4-204ENST00000444061 NBEAL2Q6ZNJ1 2754 aa9.24□□□□□ -0.93
SMARCA4-204ENST00000444061 LIMD2Q9BT23 127 aa9.24□□□□□ -0.93
SMARCA4-204ENST00000444061 MUC3AQ02505 3323 aa9.24□□□□□ -0.93
SMARCA4-204ENST00000444061 CNBPP62633 177 aaKnown RBP9.23□□□□□ -0.93
SMARCA4-204ENST00000444061 A0A087WSZ3 146 aa9.23□□□□□ -0.93
SMARCA4-204ENST00000444061 MOBPQ13875 183 aa9.22□□□□□ -0.93
SMARCA4-204ENST00000444061 SMR3BP02814 79 aaPredicted RBP9.22□□□□□ -0.93
SMARCA4-204ENST00000444061 ELOF1P60002 83 aaKnown RBP9.22□□□□□ -0.93
SMARCA4-204ENST00000444061 CASC2Q6XLA1 102 aa9.22□□□□□ -0.93
SMARCA4-204ENST00000444061 A0A1B0GW54 56 aa9.21□□□□□ -0.93
SMARCA4-204ENST00000444061 LINC00208Q96KT6 92 aa9.21□□□□□ -0.94
SMARCA4-204ENST00000444061 TLX1NBP0CAT3 122 aa9.21□□□□□ -0.94
SMARCA4-204ENST00000444061 CELSR2Q9HCU4 2923 aa9.2□□□□□ -0.94
SMARCA4-204ENST00000444061 hDV103S1A0JD37 113 aa9.2□□□□□ -0.94
SMARCA4-204ENST00000444061 TYMSOSQ8TAI1 123 aa9.19□□□□□ -0.94
SMARCA4-204ENST00000444061 J3QL48 77 aa9.19□□□□□ -0.94
SMARCA4-204ENST00000444061 LITAFQ99732 161 aa9.19□□□□□ -0.94
SMARCA4-204ENST00000444061 K7ERS5 55 aa9.19□□□□□ -0.94
SMARCA4-204ENST00000444061 IGLV1-50A0A075B6I6 118 aa9.17□□□□□ -0.94
SMARCA4-204ENST00000444061 C4orf26Q17RF5 130 aa9.17□□□□□ -0.94
SMARCA4-204ENST00000444061 FAM218AQ96MZ4 157 aa9.17□□□□□ -0.94
SMARCA4-204ENST00000444061 HRNRQ86YZ3 2850 aaPredicted RBP9.17□□□□□ -0.94
SMARCA4-204ENST00000444061 LOC110117498A0A087WWA1 95 aa9.17□□□□□ -0.94
SMARCA4-204ENST00000444061 C9orf129Q5T035 196 aaKnown RBP9.17□□□□□ -0.94
SMARCA4-204ENST00000444061 IGLV6-57P01721 117 aa9.16□□□□□ -0.94
SMARCA4-204ENST00000444061 CRYBG3Q68DQ2 2970 aa9.16□□□□□ -0.94
SMARCA4-204ENST00000444061 LCE6AA0A183 80 aa9.15□□□□□ -0.94
SMARCA4-204ENST00000444061 SPACA4Q8TDM5 124 aa9.15□□□□□ -0.94
SMARCA4-204ENST00000444061 KCNQ1DNQ9H478 68 aa9.14□□□□□ -0.95
SMARCA4-204ENST00000444061 PSPHP1O15172 72 aa9.14□□□□□ -0.95
SMARCA4-204ENST00000444061 ASH1LQ9NR48 2969 aaKnown RBP9.14□□□□□ -0.95
SMARCA4-204ENST00000444061 HCG22E2RYF7 251 aa9.14□□□□□ -0.95
SMARCA4-204ENST00000444061 Q8NBF4 154 aa9.14□□□□□ -0.95
SMARCA4-204ENST00000444061 NIPBLQ6KC79 2804 aaeCLIP9.13□□□□□ -0.954e-6■□□□□ 9.9
SMARCA4-204ENST00000444061 ST20-AS1Q8NBB2 130 aa9.13□□□□□ -0.95
SMARCA4-204ENST00000444061 IGHV6-1A0A0B4J1U7 121 aa9.13□□□□□ -0.95
SMARCA4-204ENST00000444061 Q6ZQT0 140 aa9.12□□□□□ -0.95
SMARCA4-204ENST00000444061 PLA2G2DQ9UNK4 145 aa9.12□□□□□ -0.95
SMARCA4-204ENST00000444061 A0A1W2PNN7 141 aa9.12□□□□□ -0.95
SMARCA4-204ENST00000444061 ZNF861PO60384 105 aa9.12□□□□□ -0.95
SMARCA4-204ENST00000444061 H0Y9P7 68 aa9.1□□□□□ -0.95
SMARCA4-204ENST00000444061 ERC2-IT1O76042 136 aa9.1□□□□□ -0.95
SMARCA4-204ENST00000444061 LINC00528Q8N1L1 170 aa9.1□□□□□ -0.95
SMARCA4-204ENST00000444061 DCHS1Q96JQ0 3298 aa9.1□□□□□ -0.95
SMARCA4-204ENST00000444061 EIF4EBP3O60516 100 aaPredicted RBP9.08□□□□□ -0.96
SMARCA4-204ENST00000444061 DEFB116Q30KQ4 102 aa9.08□□□□□ -0.96
SMARCA4-204ENST00000444061 PSORS1C2Q9UIG4 136 aa9.08□□□□□ -0.96
SMARCA4-204ENST00000444061 H3BPC8 53 aa9.07□□□□□ -0.96
SMARCA4-204ENST00000444061 IGLV7-43P04211 117 aa9.06□□□□□ -0.96
SMARCA4-204ENST00000444061 KRTAP1-5Q9BYS1 174 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms