RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 IGLV7-46A0A075B6I9 117 aa11.55□□□□□ -0.56
LRCH3-208ENST00000443727 ZNF815PA8K554 130 aa11.55□□□□□ -0.56
LRCH3-208ENST00000443727 ERC2-IT1O76042 136 aa11.55□□□□□ -0.56
LRCH3-208ENST00000443727 C3orf79P0CE67 100 aa11.55□□□□□ -0.56
LRCH3-208ENST00000443727 JOSD1Q15040 202 aaPredicted RBP11.55□□□□□ -0.56
LRCH3-208ENST00000443727 LINC00483Q53H64 154 aa11.55□□□□□ -0.56
LRCH3-208ENST00000443727 Q9BRP9 147 aa11.55□□□□□ -0.56
LRCH3-208ENST00000443727 ZNF73O43830 326 aaPredicted RBP11.54□□□□□ -0.56
LRCH3-208ENST00000443727 LINC00308Q8TCZ7 52 aa11.54□□□□□ -0.56
LRCH3-208ENST00000443727 CBY1Q9Y3M2 126 aa11.54□□□□□ -0.56
LRCH3-208ENST00000443727 TIMM17BO60830 172 aa11.53□□□□□ -0.56
LRCH3-208ENST00000443727 IGLV9-49A0A0B4J1Y8 123 aa11.52□□□□□ -0.57
LRCH3-208ENST00000443727 HINT1P49773 126 aaPredicted RBP11.52□□□□□ -0.57
LRCH3-208ENST00000443727 OR13C6PQ8NH95 151 aa11.52□□□□□ -0.57
LRCH3-208ENST00000443727 LITAFQ99732 161 aa11.52□□□□□ -0.57
LRCH3-208ENST00000443727 CDIP1Q9H305 208 aa11.52□□□□□ -0.57
LRCH3-208ENST00000443727 SPANXCQ9NY87 97 aa11.52□□□□□ -0.57
LRCH3-208ENST00000443727 C20orf202A1L168 122 aa11.51□□□□□ -0.57
LRCH3-208ENST00000443727 COA6Q5JTJ3 125 aaKnown RBP11.51□□□□□ -0.57
LRCH3-208ENST00000443727 MOBPQ13875 183 aa11.5□□□□□ -0.57
LRCH3-208ENST00000443727 TTTY13Q9BZ97 58 aa11.5□□□□□ -0.57
LRCH3-208ENST00000443727 SPINK1P00995 79 aa11.48□□□□□ -0.57
LRCH3-208ENST00000443727 TPRXLQ17RH7 258 aa11.48□□□□□ -0.57
LRCH3-208ENST00000443727 SCGB1D4Q6XE38 83 aa11.47□□□□□ -0.57
LRCH3-208ENST00000443727 SSBP3-AS1Q7Z2R9 100 aa11.45□□□□□ -0.58
LRCH3-208ENST00000443727 SPANXDQ9BXN6 97 aa11.45□□□□□ -0.58
LRCH3-208ENST00000443727 FP248Q71RG6 208 aaPredicted RBP11.44□□□□□ -0.58
LRCH3-208ENST00000443727 LINC00518Q8N0U6 118 aa11.44□□□□□ -0.58
LRCH3-208ENST00000443727 C9orf153Q5TBE3 101 aa11.43□□□□□ -0.58
LRCH3-208ENST00000443727 ATOH7Q8N100 152 aa11.43□□□□□ -0.58
LRCH3-208ENST00000443727 ST20-AS1Q8NBB2 130 aa11.43□□□□□ -0.58
LRCH3-208ENST00000443727 A0A0U1RQV1 116 aa11.41□□□□□ -0.58
LRCH3-208ENST00000443727 AKR1D1P51857 326 aa11.41□□□□□ -0.58
LRCH3-208ENST00000443727 ANKRD39Q53RE8 183 aa11.41□□□□□ -0.58
LRCH3-208ENST00000443727 COPS9Q8WXC6 57 aa11.41□□□□□ -0.58
LRCH3-208ENST00000443727 C5orf52A6NGY3 159 aa11.4□□□□□ -0.58
LRCH3-208ENST00000443727 DHRS4-AS1Q9P1J3 65 aa11.4□□□□□ -0.58
LRCH3-208ENST00000443727 MUC2Q02817 5179 aa11.39□□□□□ -0.59
LRCH3-208ENST00000443727 COX7BP24311 80 aa11.37□□□□□ -0.59
LRCH3-208ENST00000443727 IFITM1P13164 125 aa11.36□□□□□ -0.59
LRCH3-208ENST00000443727 RPS29P62273 56 aaKnown RBP11.36□□□□□ -0.59
LRCH3-208ENST00000443727 C6orf99Q4VX62 202 aa11.36□□□□□ -0.59
LRCH3-208ENST00000443727 SLC25A34Q6PIV7 304 aa11.35□□□□□ -0.59
LRCH3-208ENST00000443727 PCP2Q8IVA1 136 aa11.35□□□□□ -0.59
LRCH3-208ENST00000443727 SLC25A20O43772 301 aa11.34□□□□□ -0.59
LRCH3-208ENST00000443727 S100A2P29034 98 aa11.34□□□□□ -0.59
LRCH3-208ENST00000443727 ELOF1P60002 83 aaKnown RBP11.34□□□□□ -0.59
LRCH3-208ENST00000443727 Q6ZVH6 145 aa11.34□□□□□ -0.59
LRCH3-208ENST00000443727 A6NDN8 102 aa11.33□□□□□ -0.6
LRCH3-208ENST00000443727 Q8N377 158 aa11.33□□□□□ -0.6
LRCH3-208ENST00000443727 SNRPEP62304 92 aaKnown RBP11.32□□□□□ -0.6
LRCH3-208ENST00000443727 KRTAP13-3Q3SY46 172 aa11.31□□□□□ -0.6
LRCH3-208ENST00000443727 MUSTN1Q8IVN3 82 aa11.31□□□□□ -0.6
LRCH3-208ENST00000443727 LAMTOR3Q9UHA4 124 aa11.31□□□□□ -0.6
LRCH3-208ENST00000443727 SPRR1BP22528 89 aa11.3□□□□□ -0.6
LRCH3-208ENST00000443727 TAL2Q16559 108 aa11.3□□□□□ -0.6
LRCH3-208ENST00000443727 DEFB105AQ8NG35 78 aa11.3□□□□□ -0.6
LRCH3-208ENST00000443727 HIST3H2BBQ8N257 126 aa11.29□□□□□ -0.6
LRCH3-208ENST00000443727 TRBV7-6A0A0J9YX20 115 aa11.28□□□□□ -0.6
LRCH3-208ENST00000443727 S100A1P23297 94 aa11.28□□□□□ -0.6
LRCH3-208ENST00000443727 HIST1H2BLQ99880 126 aa11.28□□□□□ -0.6
LRCH3-208ENST00000443727 HSBP1L1C9JCN9 74 aa11.27□□□□□ -0.61
LRCH3-208ENST00000443727 A0A1B0GWB2 263 aa11.26□□□□□ -0.61
LRCH3-208ENST00000443727 S100A6P06703 90 aa11.26□□□□□ -0.61
LRCH3-208ENST00000443727 TRAV13-2A0A0B4J235 113 aa11.25□□□□□ -0.61
LRCH3-208ENST00000443727 Q1RN00 199 aa11.25□□□□□ -0.61
LRCH3-208ENST00000443727 HRCT1Q6UXD1 115 aa11.25□□□□□ -0.61
LRCH3-208ENST00000443727 MUC17Q685J3 4493 aa11.25□□□□□ -0.61
LRCH3-208ENST00000443727 TEX49A0A1B0GTD5 131 aa11.24□□□□□ -0.61
LRCH3-208ENST00000443727 LIMD2Q9BT23 127 aa11.22□□□□□ -0.61
LRCH3-208ENST00000443727 A4D1N5 150 aa11.21□□□□□ -0.61
LRCH3-208ENST00000443727 SMIM11BQ8TCY0 68 aa11.19□□□□□ -0.62
LRCH3-208ENST00000443727 PRO1933Q9H354 126 aa11.19□□□□□ -0.62
LRCH3-208ENST00000443727 NHP2Q9NX24 153 aaKnown RBP11.19□□□□□ -0.62
LRCH3-208ENST00000443727 SEC61BP60468 96 aaKnown RBP11.17□□□□□ -0.62
LRCH3-208ENST00000443727 ASB16-AS1Q495Z4 193 aa11.17□□□□□ -0.62
LRCH3-208ENST00000443727 SCGB1D1O95968 90 aa11.16□□□□□ -0.62
LRCH3-208ENST00000443727 VAMP3Q15836 100 aa11.16□□□□□ -0.62
LRCH3-208ENST00000443727 IGLV5-48A0A075B6I7 105 aa11.14□□□□□ -0.63
LRCH3-208ENST00000443727 H7C2G1 150 aa11.14□□□□□ -0.63
LRCH3-208ENST00000443727 CD164Q04900 197 aa11.14□□□□□ -0.63
LRCH3-208ENST00000443727 SMIM29Q86T20 159 aa11.13□□□□□ -0.63
LRCH3-208ENST00000443727 LINC01547P58512 204 aaPredicted RBP11.12□□□□□ -0.63
LRCH3-208ENST00000443727 FAT4Q6V0I7 4981 aa11.1□□□□□ -0.63
LRCH3-208ENST00000443727 HIST1H4GQ99525 98 aa11.09□□□□□ -0.63
LRCH3-208ENST00000443727 XP32Q5T750 250 aa11.08□□□□□ -0.64
LRCH3-208ENST00000443727 F8WEM9 126 aa11.07□□□□□ -0.64
LRCH3-208ENST00000443727 A0A0G2JQZ4 141 aa11.06□□□□□ -0.64
LRCH3-208ENST00000443727 LINC00575Q6W349 94 aa11.06□□□□□ -0.64
LRCH3-208ENST00000443727 C12orf57Q99622 126 aa11.06□□□□□ -0.64
LRCH3-208ENST00000443727 LCE2AQ5TA79 106 aaPredicted RBP11.05□□□□□ -0.64
LRCH3-208ENST00000443727 hADV29S1A0JD25 119 aa11.04□□□□□ -0.64
LRCH3-208ENST00000443727 C9orf92A6NGG3 77 aa11.04□□□□□ -0.64
LRCH3-208ENST00000443727 COX8AP10176 69 aa11.04□□□□□ -0.64
LRCH3-208ENST00000443727 Q5XG85 94 aa11.02□□□□□ -0.65
LRCH3-208ENST00000443727 Q6ZQY7 126 aa11.02□□□□□ -0.65
LRCH3-208ENST00000443727 KRTAP4-1Q9BYQ7 146 aa11□□□□□ -0.65
LRCH3-208ENST00000443727 DLEU1O43261 78 aa10.99□□□□□ -0.65
LRCH3-208ENST00000443727 BVES-AS1Q5T3Y7 98 aa10.99□□□□□ -0.65
LRCH3-208ENST00000443727 TCL1BO95988 128 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms