RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 M0R2N4 97 aa6.72□□□□□ -1.33
CPNE1-218ENST00000439806 Q6ZRX8 168 aa6.72□□□□□ -1.33
CPNE1-218ENST00000439806 KRTAP1-5Q9BYS1 174 aa6.72□□□□□ -1.33
CPNE1-218ENST00000439806 SS18L2Q9UHA2 77 aa6.72□□□□□ -1.33
CPNE1-218ENST00000439806 FBN1P35555 2871 aaKnown RBP6.72□□□□□ -1.33
CPNE1-218ENST00000439806 STAB1Q9NY15 2570 aa6.71□□□□□ -1.33
CPNE1-218ENST00000439806 TENM3Q9P273 2699 aa6.71□□□□□ -1.34
CPNE1-218ENST00000439806 Q6ZVQ6 151 aa6.71□□□□□ -1.34
CPNE1-218ENST00000439806 DEFB105AQ8NG35 78 aa6.71□□□□□ -1.34
CPNE1-218ENST00000439806 CMYA5Q8N3K9 4069 aa6.71□□□□□ -1.34
CPNE1-218ENST00000439806 TRRAPQ9Y4A5 3859 aa6.71□□□□□ -1.34
CPNE1-218ENST00000439806 A0A087WVE0 104 aa6.7□□□□□ -1.34
CPNE1-218ENST00000439806 SPRR1AP35321 89 aa6.7□□□□□ -1.34
CPNE1-218ENST00000439806 DNAH3Q8TD57 4116 aa6.7□□□□□ -1.34
CPNE1-218ENST00000439806 CNBPP62633 177 aaKnown RBP6.69□□□□□ -1.34
CPNE1-218ENST00000439806 UBE2BP63146 152 aa6.69□□□□□ -1.34
CPNE1-218ENST00000439806 HAMPP81172 84 aa6.69□□□□□ -1.34
CPNE1-218ENST00000439806 KRTAP7-1Q8IUC3 87 aa6.69□□□□□ -1.34
CPNE1-218ENST00000439806 C3orf22Q8N5N4 141 aa6.69□□□□□ -1.34
CPNE1-218ENST00000439806 BAHCC1Q9P281 2608 aa6.69□□□□□ -1.34
CPNE1-218ENST00000439806 A0A096LNI7 61 aa6.68□□□□□ -1.34
CPNE1-218ENST00000439806 IGKV2-24A0A0C4DH68 120 aa6.68□□□□□ -1.34
CPNE1-218ENST00000439806 C16orf90A8MZG2 172 aa6.68□□□□□ -1.34
CPNE1-218ENST00000439806 KRTAP4-16G5E9R7 235 aaPredicted RBP6.68□□□□□ -1.34
CPNE1-218ENST00000439806 UQCRQO14949 82 aa6.68□□□□□ -1.34
CPNE1-218ENST00000439806 COX7CP15954 63 aa6.68□□□□□ -1.34
CPNE1-218ENST00000439806 C9orf153Q5TBE3 101 aa6.68□□□□□ -1.34
CPNE1-218ENST00000439806 REG3GQ6UW15 175 aa6.68□□□□□ -1.34
CPNE1-218ENST00000439806 PKIGQ9Y2B9 76 aa6.68□□□□□ -1.34
CPNE1-218ENST00000439806 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.67□□□□□ -1.34
CPNE1-218ENST00000439806 LINC01547P58512 204 aaPredicted RBP6.67□□□□□ -1.34
CPNE1-218ENST00000439806 FAM19A1Q7Z5A9 133 aa6.67□□□□□ -1.34
CPNE1-218ENST00000439806 Q8N377 158 aa6.67□□□□□ -1.34
CPNE1-218ENST00000439806 Q9BRP9 147 aa6.67□□□□□ -1.34
CPNE1-218ENST00000439806 MAST4O15021 2626 aa6.65□□□□□ -1.34
CPNE1-218ENST00000439806 NBDYA0A0U1RRE5 68 aa6.65□□□□□ -1.34
CPNE1-218ENST00000439806 CXCL6P80162 114 aa6.65□□□□□ -1.34
CPNE1-218ENST00000439806 RPS28P62857 69 aaKnown RBP6.64□□□□□ -1.35
CPNE1-218ENST00000439806 SERP2Q8N6R1 65 aa6.64□□□□□ -1.35
CPNE1-218ENST00000439806 ST20-AS1Q8NBB2 130 aa6.64□□□□□ -1.35
CPNE1-218ENST00000439806 FLNBO75369 2602 aaKnown RBP6.64□□□□□ -1.35
CPNE1-218ENST00000439806 IGLV5-48A0A075B6I7 105 aa6.63□□□□□ -1.35
CPNE1-218ENST00000439806 A0A1W2PNN7 141 aa6.62□□□□□ -1.35
CPNE1-218ENST00000439806 ERC2-IT1O76042 136 aa6.62□□□□□ -1.35
CPNE1-218ENST00000439806 CRYGAP11844 174 aa6.62□□□□□ -1.35
CPNE1-218ENST00000439806 FUSP35637 526 aaKnown RBP eCLIP6.62□□□□□ -1.351e-10■■□□□ 12.2
CPNE1-218ENST00000439806 NREPQ16612 68 aa6.62□□□□□ -1.35
CPNE1-218ENST00000439806 SCXQ7RTU7 201 aa6.62□□□□□ -1.35
CPNE1-218ENST00000439806 SMIM20Q8N5G0 67 aa6.62□□□□□ -1.35
CPNE1-218ENST00000439806 HUWE1Q7Z6Z7 4374 aaKnown RBP6.61□□□□□ -1.35
CPNE1-218ENST00000439806 F8WEM9 126 aa6.61□□□□□ -1.35
CPNE1-218ENST00000439806 LRCOL1A6NCL2 159 aa6.6□□□□□ -1.35
CPNE1-218ENST00000439806 BCE1O60756 84 aa6.6□□□□□ -1.35
CPNE1-218ENST00000439806 CHTF8P0CG12 524 aa6.6□□□□□ -1.35
CPNE1-218ENST00000439806 C1orf137Q5JT78 98 aa6.6□□□□□ -1.35
CPNE1-218ENST00000439806 C9orf163Q8N9P6 203 aa6.6□□□□□ -1.35
CPNE1-218ENST00000439806 A0A1B0GW54 56 aa6.59□□□□□ -1.35
CPNE1-218ENST00000439806 C3orf84H3BNL1 204 aa6.59□□□□□ -1.35
CPNE1-218ENST00000439806 PRLHP81277 87 aa6.59□□□□□ -1.35
CPNE1-218ENST00000439806 TNP2Q05952 138 aa6.59□□□□□ -1.35
CPNE1-218ENST00000439806 PHF5AQ7RTV0 110 aaKnown RBP6.59□□□□□ -1.35
CPNE1-218ENST00000439806 J3KT08 172 aa6.58□□□□□ -1.36
CPNE1-218ENST00000439806 Q8NBF4 154 aa6.58□□□□□ -1.36
CPNE1-218ENST00000439806 LINC00474Q9P2X8 69 aa6.58□□□□□ -1.36
CPNE1-218ENST00000439806 PKD1L1Q8TDX9 2849 aa6.58□□□□□ -1.36
CPNE1-218ENST00000439806 COL6A5A8TX70 2615 aa6.57□□□□□ -1.36
CPNE1-218ENST00000439806 A0A1W2PNM2 257 aa6.57□□□□□ -1.36
CPNE1-218ENST00000439806 BPY2O14599 106 aa6.57□□□□□ -1.36
CPNE1-218ENST00000439806 Q6ZRN7 208 aaPredicted RBP6.57□□□□□ -1.36
CPNE1-218ENST00000439806 HIGD2AQ9BW72 106 aa6.57□□□□□ -1.36
CPNE1-218ENST00000439806 NOTCH1P46531 2555 aa6.57□□□□□ -1.36
CPNE1-218ENST00000439806 TRAV7A0A075B6U4 112 aa6.55□□□□□ -1.36
CPNE1-218ENST00000439806 UBE2AP49459 152 aa6.55□□□□□ -1.36
CPNE1-218ENST00000439806 TMEM258P61165 79 aa6.55□□□□□ -1.36
CPNE1-218ENST00000439806 DPH3Q96FX2 82 aa6.55□□□□□ -1.36
CPNE1-218ENST00000439806 SMIM29Q86T20 159 aa6.54□□□□□ -1.36
CPNE1-218ENST00000439806 LINC00476Q8WZB0 136 aa6.54□□□□□ -1.36
CPNE1-218ENST00000439806 H0Y9J4 135 aa6.53□□□□□ -1.36
CPNE1-218ENST00000439806 IGKV4-1P06312 121 aa6.53□□□□□ -1.36
CPNE1-218ENST00000439806 SPRR4Q96PI1 79 aa6.53□□□□□ -1.36
CPNE1-218ENST00000439806 A0A087WTM6 91 aa6.52□□□□□ -1.37
CPNE1-218ENST00000439806 EPM2AB3EWF7 344 aa6.52□□□□□ -1.37
CPNE1-218ENST00000439806 ANK2Q01484 3957 aa6.52□□□□□ -1.37
CPNE1-218ENST00000439806 C5orf47Q569G3 176 aa6.51□□□□□ -1.37
CPNE1-218ENST00000439806 IGFL1Q6UW32 110 aa6.51□□□□□ -1.37
CPNE1-218ENST00000439806 KRTAP11-1Q8IUC1 163 aa6.51□□□□□ -1.37
CPNE1-218ENST00000439806 Q8N9L7 120 aa6.51□□□□□ -1.37
CPNE1-218ENST00000439806 IGLV8-61A0A075B6I0 122 aa6.5□□□□□ -1.37
CPNE1-218ENST00000439806 SPRR1BP22528 89 aa6.49□□□□□ -1.37
CPNE1-218ENST00000439806 C20orf197Q8N268 126 aa6.49□□□□□ -1.37
CPNE1-218ENST00000439806 SPACA4Q8TDM5 124 aa6.49□□□□□ -1.37
CPNE1-218ENST00000439806 DNAH1Q9P2D7 4330 aa6.49□□□□□ -1.37
CPNE1-218ENST00000439806 PANO1I0J062 215 aa6.48□□□□□ -1.37
CPNE1-218ENST00000439806 RTL8CO15255 209 aa6.48□□□□□ -1.37
CPNE1-218ENST00000439806 CYSTM1Q9H1C7 97 aa6.48□□□□□ -1.37
CPNE1-218ENST00000439806 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.48□□□□□ -1.37
CPNE1-218ENST00000439806 Q6ZR54 194 aa6.47□□□□□ -1.37
CPNE1-218ENST00000439806 DNAH9Q9NYC9 4486 aa6.46□□□□□ -1.37
CPNE1-218ENST00000439806 A0A0G2JQZ4 141 aa6.46□□□□□ -1.38
CPNE1-218ENST00000439806 NBEAL1Q6ZS30 2694 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms