RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 HIST2H2BEQ16778 126 aa11.5□□□□□ -0.57
NCKIPSD-206ENST00000439518 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.5□□□□□ -0.57
NCKIPSD-206ENST00000439518 HIST1H2BHQ93079 126 aa11.5□□□□□ -0.57
NCKIPSD-206ENST00000439518 HIST1H2BNQ99877 126 aa11.5□□□□□ -0.57
NCKIPSD-206ENST00000439518 HIST1H2BMQ99879 126 aa11.5□□□□□ -0.57
NCKIPSD-206ENST00000439518 TRAV23DV6A0A075B6W5 121 aa11.49□□□□□ -0.57
NCKIPSD-206ENST00000439518 NPC2P61916 151 aa11.49□□□□□ -0.57
NCKIPSD-206ENST00000439518 MOBPQ13875 183 aa11.49□□□□□ -0.57
NCKIPSD-206ENST00000439518 SSBP3-AS1Q7Z2R9 100 aa11.49□□□□□ -0.57
NCKIPSD-206ENST00000439518 IGLV9-49A0A0B4J1Y8 123 aa11.48□□□□□ -0.57
NCKIPSD-206ENST00000439518 LITAFQ99732 161 aa11.48□□□□□ -0.57
NCKIPSD-206ENST00000439518 ZNF73O43830 326 aaPredicted RBP11.47□□□□□ -0.57
NCKIPSD-206ENST00000439518 LINC01545Q5VT33 79 aa11.47□□□□□ -0.57
NCKIPSD-206ENST00000439518 JOSD1Q15040 202 aaPredicted RBP11.46□□□□□ -0.57
NCKIPSD-206ENST00000439518 KRTAP13-3Q3SY46 172 aa11.46□□□□□ -0.57
NCKIPSD-206ENST00000439518 MUC17Q685J3 4493 aa11.45□□□□□ -0.58
NCKIPSD-206ENST00000439518 TIMM17BO60830 172 aa11.44□□□□□ -0.58
NCKIPSD-206ENST00000439518 RPS29P62273 56 aaKnown RBP11.44□□□□□ -0.58
NCKIPSD-206ENST00000439518 LINC00308Q8TCZ7 52 aa11.44□□□□□ -0.58
NCKIPSD-206ENST00000439518 LCE2AQ5TA79 106 aaPredicted RBP11.43□□□□□ -0.58
NCKIPSD-206ENST00000439518 PET117Q6UWS5 81 aa11.43□□□□□ -0.58
NCKIPSD-206ENST00000439518 SPANXCQ9NY87 97 aa11.43□□□□□ -0.58
NCKIPSD-206ENST00000439518 FAT4Q6V0I7 4981 aa11.43□□□□□ -0.58
NCKIPSD-206ENST00000439518 Q8N377 158 aa11.42□□□□□ -0.58
NCKIPSD-206ENST00000439518 ST20-AS1Q8NBB2 130 aa11.41□□□□□ -0.58
NCKIPSD-206ENST00000439518 CBY1Q9Y3M2 126 aa11.41□□□□□ -0.58
NCKIPSD-206ENST00000439518 C5orf52A6NGY3 159 aa11.4□□□□□ -0.58
NCKIPSD-206ENST00000439518 ZNF815PA8K554 130 aa11.38□□□□□ -0.59
NCKIPSD-206ENST00000439518 C3orf79P0CE67 100 aa11.38□□□□□ -0.59
NCKIPSD-206ENST00000439518 HINT1P49773 126 aaPredicted RBP11.38□□□□□ -0.59
NCKIPSD-206ENST00000439518 TTTY13Q9BZ97 58 aa11.38□□□□□ -0.59
NCKIPSD-206ENST00000439518 OR13C6PQ8NH95 151 aa11.37□□□□□ -0.59
NCKIPSD-206ENST00000439518 SLC25A20O43772 301 aa11.36□□□□□ -0.59
NCKIPSD-206ENST00000439518 COA6Q5JTJ3 125 aaKnown RBP11.36□□□□□ -0.59
NCKIPSD-206ENST00000439518 C9orf153Q5TBE3 101 aa11.35□□□□□ -0.59
NCKIPSD-206ENST00000439518 SPANXDQ9BXN6 97 aa11.35□□□□□ -0.59
NCKIPSD-206ENST00000439518 SPRR1BP22528 89 aa11.34□□□□□ -0.59
NCKIPSD-206ENST00000439518 ASB16-AS1Q495Z4 193 aa11.34□□□□□ -0.59
NCKIPSD-206ENST00000439518 DHRS4-AS1Q9P1J3 65 aa11.33□□□□□ -0.6
NCKIPSD-206ENST00000439518 LINC00518Q8N0U6 118 aa11.32□□□□□ -0.6
NCKIPSD-206ENST00000439518 KRTDAPP60985 99 aa11.31□□□□□ -0.6
NCKIPSD-206ENST00000439518 ELOF1P60002 83 aaKnown RBP11.29□□□□□ -0.6
NCKIPSD-206ENST00000439518 COX7BP24311 80 aa11.28□□□□□ -0.6
NCKIPSD-206ENST00000439518 C6orf99Q4VX62 202 aa11.28□□□□□ -0.6
NCKIPSD-206ENST00000439518 SLC25A34Q6PIV7 304 aa11.27□□□□□ -0.61
NCKIPSD-206ENST00000439518 SEC61BP60468 96 aaKnown RBP11.26□□□□□ -0.61
NCKIPSD-206ENST00000439518 ANKRD39Q53RE8 183 aa11.26□□□□□ -0.61
NCKIPSD-206ENST00000439518 SCGB1D4Q6XE38 83 aa11.26□□□□□ -0.61
NCKIPSD-206ENST00000439518 C20orf202A1L168 122 aa11.25□□□□□ -0.61
NCKIPSD-206ENST00000439518 KRTAP4-1Q9BYQ7 146 aa11.25□□□□□ -0.61
NCKIPSD-206ENST00000439518 XP32Q5T750 250 aa11.24□□□□□ -0.61
NCKIPSD-206ENST00000439518 KRTAP9-2Q9BYQ4 174 aa11.24□□□□□ -0.61
NCKIPSD-206ENST00000439518 TRBV7-6A0A0J9YX20 115 aa11.23□□□□□ -0.61
NCKIPSD-206ENST00000439518 IFITM1P13164 125 aa11.23□□□□□ -0.61
NCKIPSD-206ENST00000439518 LAMTOR3Q9UHA4 124 aa11.23□□□□□ -0.61
NCKIPSD-206ENST00000439518 ATOH7Q8N100 152 aa11.22□□□□□ -0.61
NCKIPSD-206ENST00000439518 COPS9Q8WXC6 57 aa11.21□□□□□ -0.61
NCKIPSD-206ENST00000439518 TAL2Q16559 108 aa11.2□□□□□ -0.62
NCKIPSD-206ENST00000439518 Q6ZVH6 145 aa11.2□□□□□ -0.62
NCKIPSD-206ENST00000439518 PCP2Q8IVA1 136 aa11.2□□□□□ -0.62
NCKIPSD-206ENST00000439518 HRCT1Q6UXD1 115 aa11.19□□□□□ -0.62
NCKIPSD-206ENST00000439518 LIMD2Q9BT23 127 aa11.19□□□□□ -0.62
NCKIPSD-206ENST00000439518 TEX49A0A1B0GTD5 131 aa11.18□□□□□ -0.62
NCKIPSD-206ENST00000439518 Q1RN00 199 aa11.18□□□□□ -0.62
NCKIPSD-206ENST00000439518 MUSTN1Q8IVN3 82 aa11.18□□□□□ -0.62
NCKIPSD-206ENST00000439518 DEFB105AQ8NG35 78 aa11.18□□□□□ -0.62
NCKIPSD-206ENST00000439518 A0A1B0GWB2 263 aa11.17□□□□□ -0.62
NCKIPSD-206ENST00000439518 A6NDN8 102 aa11.17□□□□□ -0.62
NCKIPSD-206ENST00000439518 AKR1D1P51857 326 aa11.17□□□□□ -0.62
NCKIPSD-206ENST00000439518 CD164Q04900 197 aa11.15□□□□□ -0.62
NCKIPSD-206ENST00000439518 SMIM29Q86T20 159 aa11.15□□□□□ -0.62
NCKIPSD-206ENST00000439518 IGLV5-48A0A075B6I7 105 aa11.14□□□□□ -0.63
NCKIPSD-206ENST00000439518 LINC01547P58512 204 aaPredicted RBP11.14□□□□□ -0.63
NCKIPSD-206ENST00000439518 PRO1933Q9H354 126 aa11.14□□□□□ -0.63
NCKIPSD-206ENST00000439518 SNRPEP62304 92 aaKnown RBP11.12□□□□□ -0.63
NCKIPSD-206ENST00000439518 TRAV13-2A0A0B4J235 113 aa11.1□□□□□ -0.63
NCKIPSD-206ENST00000439518 A4D1N5 150 aa11.1□□□□□ -0.63
NCKIPSD-206ENST00000439518 SMIM11BQ8TCY0 68 aa11.1□□□□□ -0.63
NCKIPSD-206ENST00000439518 H7C2G1 150 aa11.09□□□□□ -0.63
NCKIPSD-206ENST00000439518 Q5XG85 94 aa11.09□□□□□ -0.63
NCKIPSD-206ENST00000439518 HIST3H2BBQ8N257 126 aa11.07□□□□□ -0.64
NCKIPSD-206ENST00000439518 HIST1H2BLQ99880 126 aa11.07□□□□□ -0.64
NCKIPSD-206ENST00000439518 A0A0G2JQZ4 141 aa11.05□□□□□ -0.64
NCKIPSD-206ENST00000439518 C9orf92A6NGG3 77 aa11.05□□□□□ -0.64
NCKIPSD-206ENST00000439518 NHP2Q9NX24 153 aaKnown RBP11.05□□□□□ -0.64
NCKIPSD-206ENST00000439518 C1orf195Q5TG92 126 aa11.03□□□□□ -0.64
NCKIPSD-206ENST00000439518 S100A2P29034 98 aa11.01□□□□□ -0.65
NCKIPSD-206ENST00000439518 PCOTHQ58A44 107 aa11.01□□□□□ -0.65
NCKIPSD-206ENST00000439518 LCE2CQ5TA81 110 aa11□□□□□ -0.65
NCKIPSD-206ENST00000439518 VAMP3Q15836 100 aa10.99□□□□□ -0.65
NCKIPSD-206ENST00000439518 LINC00575Q6W349 94 aa10.99□□□□□ -0.65
NCKIPSD-206ENST00000439518 HSBP1L1C9JCN9 74 aa10.98□□□□□ -0.65
NCKIPSD-206ENST00000439518 KRTAP19-2Q3LHN2 52 aa10.97□□□□□ -0.65
NCKIPSD-206ENST00000439518 IGLV8-61A0A075B6I0 122 aa10.95□□□□□ -0.66
NCKIPSD-206ENST00000439518 Q6ZQY7 126 aa10.93□□□□□ -0.66
NCKIPSD-206ENST00000439518 hADV29S1A0JD25 119 aa10.92□□□□□ -0.66
NCKIPSD-206ENST00000439518 F8WEM9 126 aa10.92□□□□□ -0.66
NCKIPSD-206ENST00000439518 TCL1BO95988 128 aa10.91□□□□□ -0.66
NCKIPSD-206ENST00000439518 S100A6P06703 90 aa10.91□□□□□ -0.66
NCKIPSD-206ENST00000439518 S100A1P23297 94 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 198.2 ms