RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 ARL17AQ8IVW1 177 aa10.13□□□□□ -0.79
GTF3A-204ENST00000438571 MAP1LC3CQ9BXW4 147 aa10.13□□□□□ -0.79
GTF3A-204ENST00000438571 Q6ZRX8 168 aa10.12□□□□□ -0.79
GTF3A-204ENST00000438571 HIST3H2BBQ8N257 126 aa10.12□□□□□ -0.79
GTF3A-204ENST00000438571 PMCHL2Q9BQD1 86 aa10.12□□□□□ -0.79
GTF3A-204ENST00000438571 C5orf52A6NGY3 159 aa10.11□□□□□ -0.79
GTF3A-204ENST00000438571 LINC00587B1AMM8 73 aa10.11□□□□□ -0.79
GTF3A-204ENST00000438571 TRBV10-2A0A0K0K1G8 114 aa10.1□□□□□ -0.79
GTF3A-204ENST00000438571 EIF4EBP3O60516 100 aaPredicted RBP10.1□□□□□ -0.79
GTF3A-204ENST00000438571 J3QQQ9 107 aa10.09□□□□□ -0.79
GTF3A-204ENST00000438571 LEPROTL1O95214 131 aa10.09□□□□□ -0.79
GTF3A-204ENST00000438571 NPC2P61916 151 aa10.09□□□□□ -0.79
GTF3A-204ENST00000438571 SOSTDC1Q6X4U4 206 aa10.09□□□□□ -0.79
GTF3A-204ENST00000438571 SSBP3-AS1Q7Z2R9 100 aa10.09□□□□□ -0.79
GTF3A-204ENST00000438571 SPANXB1Q9NS25 103 aaPredicted RBP10.09□□□□□ -0.79
GTF3A-204ENST00000438571 LORP23490 312 aaPredicted RBP10.08□□□□□ -0.8
GTF3A-204ENST00000438571 RPS29P62273 56 aaKnown RBP10.08□□□□□ -0.8
GTF3A-204ENST00000438571 S100A12P80511 92 aa10.08□□□□□ -0.8
GTF3A-204ENST00000438571 IGLV6-57P01721 117 aa10.07□□□□□ -0.8
GTF3A-204ENST00000438571 SEC61BP60468 96 aaKnown RBP10.07□□□□□ -0.8
GTF3A-204ENST00000438571 HIST1H2BLQ99880 126 aa10.07□□□□□ -0.8
GTF3A-204ENST00000438571 C9orf153Q5TBE3 101 aa10.06□□□□□ -0.8
GTF3A-204ENST00000438571 ST20-AS1Q8NBB2 130 aa10.06□□□□□ -0.8
GTF3A-204ENST00000438571 TRAV23DV6A0A075B6W5 121 aa10.05□□□□□ -0.8
GTF3A-204ENST00000438571 S100A2P29034 98 aa10.05□□□□□ -0.8
GTF3A-204ENST00000438571 S100A7L2Q5SY68 101 aa10.05□□□□□ -0.8
GTF3A-204ENST00000438571 XP32Q5T750 250 aa10.05□□□□□ -0.8
GTF3A-204ENST00000438571 MIEN1Q9BRT3 115 aa10.05□□□□□ -0.8
GTF3A-204ENST00000438571 HSPB8Q9UJY1 196 aa10.05□□□□□ -0.8
GTF3A-204ENST00000438571 SLC25A20O43772 301 aa10.04□□□□□ -0.8
GTF3A-204ENST00000438571 NDUFC2O95298 119 aa10.04□□□□□ -0.8
GTF3A-204ENST00000438571 PLNP26678 52 aa10.04□□□□□ -0.8
GTF3A-204ENST00000438571 LINC01547P58512 204 aaPredicted RBP10.04□□□□□ -0.8
GTF3A-204ENST00000438571 ADAMTSL4-AS1Q5T5F5 129 aa10.04□□□□□ -0.8
GTF3A-204ENST00000438571 DPM2O94777 84 aa10.03□□□□□ -0.8
GTF3A-204ENST00000438571 LGALS3P17931 250 aaKnown RBP10.03□□□□□ -0.8
GTF3A-204ENST00000438571 IGKCP01834 107 aa10.02□□□□□ -0.81
GTF3A-204ENST00000438571 C3orf79P0CE67 100 aa10.02□□□□□ -0.81
GTF3A-204ENST00000438571 HERVK_113P61574 105 aa10.02□□□□□ -0.81
GTF3A-204ENST00000438571 A0A0J9YXY3 114 aa10.01□□□□□ -0.81
GTF3A-204ENST00000438571 ZNF73O43830 326 aaPredicted RBP10.01□□□□□ -0.81
GTF3A-204ENST00000438571 NMUP48645 174 aa10.01□□□□□ -0.81
GTF3A-204ENST00000438571 KRTDAPP60985 99 aa10.01□□□□□ -0.81
GTF3A-204ENST00000438571 SYS1-DBNDD2H3BUS1 97 aa10□□□□□ -0.81
GTF3A-204ENST00000438571 JOSD1Q15040 202 aaPredicted RBP9.98□□□□□ -0.81
GTF3A-204ENST00000438571 HRCT1Q6UXD1 115 aa9.96□□□□□ -0.82
GTF3A-204ENST00000438571 E9PLD3 99 aa9.95□□□□□ -0.82
GTF3A-204ENST00000438571 KRTAP19-2Q3LHN2 52 aa9.95□□□□□ -0.82
GTF3A-204ENST00000438571 PET117Q6UWS5 81 aa9.95□□□□□ -0.82
GTF3A-204ENST00000438571 LITAFQ99732 161 aa9.95□□□□□ -0.82
GTF3A-204ENST00000438571 LINC01545Q5VT33 79 aa9.94□□□□□ -0.82
GTF3A-204ENST00000438571 SPRR1BP22528 89 aa9.92□□□□□ -0.82
GTF3A-204ENST00000438571 LINC00308Q8TCZ7 52 aa9.92□□□□□ -0.82
GTF3A-204ENST00000438571 FSIP2Q5CZC0 6907 aa9.91□□□□□ -0.82
GTF3A-204ENST00000438571 C9orf92A6NGG3 77 aa9.9□□□□□ -0.82
GTF3A-204ENST00000438571 ATOH7Q8N100 152 aa9.9□□□□□ -0.82
GTF3A-204ENST00000438571 OR13C6PQ8NH95 151 aa9.9□□□□□ -0.82
GTF3A-204ENST00000438571 TTTY13Q9BZ97 58 aa9.9□□□□□ -0.82
GTF3A-204ENST00000438571 PCOTHQ58A44 107 aa9.89□□□□□ -0.83
GTF3A-204ENST00000438571 SPANXCQ9NY87 97 aa9.89□□□□□ -0.83
GTF3A-204ENST00000438571 LOC105371267A0A1B0GV96 52 aa9.88□□□□□ -0.83
GTF3A-204ENST00000438571 SCGB1D1O95968 90 aa9.88□□□□□ -0.83
GTF3A-204ENST00000438571 HINT1P49773 126 aaPredicted RBP9.88□□□□□ -0.83
GTF3A-204ENST00000438571 C20orf202A1L168 122 aa9.87□□□□□ -0.83
GTF3A-204ENST00000438571 AKR1D1P51857 326 aa9.87□□□□□ -0.83
GTF3A-204ENST00000438571 MT1HP80294 61 aa9.86□□□□□ -0.83
GTF3A-204ENST00000438571 LIMD2Q9BT23 127 aa9.86□□□□□ -0.83
GTF3A-204ENST00000438571 IGLV8-61A0A075B6I0 122 aa9.85□□□□□ -0.83
GTF3A-204ENST00000438571 Q1RN00 199 aa9.85□□□□□ -0.83
GTF3A-204ENST00000438571 TIMM17BO60830 172 aa9.84□□□□□ -0.83
GTF3A-204ENST00000438571 ELOF1P60002 83 aaKnown RBP9.84□□□□□ -0.83
GTF3A-204ENST00000438571 C6orf99Q4VX62 202 aa9.84□□□□□ -0.83
GTF3A-204ENST00000438571 PYY3Q5JQD4 70 aa9.84□□□□□ -0.83
GTF3A-204ENST00000438571 DHRS4-AS1Q9P1J3 65 aa9.84□□□□□ -0.83
GTF3A-204ENST00000438571 ZNF815PA8K554 130 aa9.83□□□□□ -0.84
GTF3A-204ENST00000438571 COX7BP24311 80 aa9.83□□□□□ -0.84
GTF3A-204ENST00000438571 SPANXDQ9BXN6 97 aa9.83□□□□□ -0.84
GTF3A-204ENST00000438571 LAMTOR3Q9UHA4 124 aa9.83□□□□□ -0.84
GTF3A-204ENST00000438571 CBY1Q9Y3M2 126 aa9.83□□□□□ -0.84
GTF3A-204ENST00000438571 H7C2G1 150 aa9.82□□□□□ -0.84
GTF3A-204ENST00000438571 DEFB105AQ8NG35 78 aa9.82□□□□□ -0.84
GTF3A-204ENST00000438571 CRCT1Q9UGL9 99 aa9.82□□□□□ -0.84
GTF3A-204ENST00000438571 A0A0G2JQZ4 141 aa9.81□□□□□ -0.84
GTF3A-204ENST00000438571 ANKRD39Q53RE8 183 aa9.81□□□□□ -0.84
GTF3A-204ENST00000438571 SLC25A34Q6PIV7 304 aa9.81□□□□□ -0.84
GTF3A-204ENST00000438571 TAL2Q16559 108 aa9.79□□□□□ -0.84
GTF3A-204ENST00000438571 SMIM29Q86T20 159 aa9.79□□□□□ -0.84
GTF3A-204ENST00000438571 FLGP20930 4061 aaPredicted RBP9.77□□□□□ -0.84
GTF3A-204ENST00000438571 CD164Q04900 197 aa9.75□□□□□ -0.85
GTF3A-204ENST00000438571 PRO1933Q9H354 126 aa9.75□□□□□ -0.85
GTF3A-204ENST00000438571 TEX49A0A1B0GTD5 131 aa9.74□□□□□ -0.85
GTF3A-204ENST00000438571 LINC00518Q8N0U6 118 aa9.74□□□□□ -0.85
GTF3A-204ENST00000438571 PAM16Q9Y3D7 125 aa9.74□□□□□ -0.85
GTF3A-204ENST00000438571 C1orf195Q5TG92 126 aa9.73□□□□□ -0.85
GTF3A-204ENST00000438571 HSBP1L1C9JCN9 74 aa9.72□□□□□ -0.85
GTF3A-204ENST00000438571 PCP2Q8IVA1 136 aa9.72□□□□□ -0.85
GTF3A-204ENST00000438571 VAMP8Q9BV40 100 aa9.72□□□□□ -0.85
GTF3A-204ENST00000438571 IGLV5-48A0A075B6I7 105 aa9.71□□□□□ -0.86
GTF3A-204ENST00000438571 SPATA45Q537H7 98 aa9.71□□□□□ -0.86
GTF3A-204ENST00000438571 KRTAP10-6P60371 365 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms