RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 KCNQ1DNQ9H478 68 aa12.46□□□□□ -0.41
RPUSD3-206ENST00000433535 KRTAP4-16G5E9R7 235 aaPredicted RBP12.45□□□□□ -0.42
RPUSD3-206ENST00000433535 TIMM17BO60830 172 aa12.45□□□□□ -0.42
RPUSD3-206ENST00000433535 SPAG11AQ6PDA7 123 aa12.45□□□□□ -0.42
RPUSD3-206ENST00000433535 ETDCA0A1B0GVM5 59 aa12.44□□□□□ -0.42
RPUSD3-206ENST00000433535 Q8NBF4 154 aa12.44□□□□□ -0.42
RPUSD3-206ENST00000433535 SMCR5Q8TEV8 140 aa12.44□□□□□ -0.42
RPUSD3-206ENST00000433535 LCE2AQ5TA79 106 aaPredicted RBP12.42□□□□□ -0.42
RPUSD3-206ENST00000433535 NDUFC2O95298 119 aa12.41□□□□□ -0.42
RPUSD3-206ENST00000433535 NPC2P61916 151 aa12.41□□□□□ -0.42
RPUSD3-206ENST00000433535 C4orf48Q5BLP8 95 aa12.41□□□□□ -0.42
RPUSD3-206ENST00000433535 PCP2Q8IVA1 136 aa12.41□□□□□ -0.42
RPUSD3-206ENST00000433535 MIEN1Q9BRT3 115 aa12.41□□□□□ -0.42
RPUSD3-206ENST00000433535 TRBV10-2A0A0K0K1G8 114 aa12.4□□□□□ -0.42
RPUSD3-206ENST00000433535 LINC00308Q8TCZ7 52 aa12.39□□□□□ -0.43
RPUSD3-206ENST00000433535 SPANXB1Q9NS25 103 aaPredicted RBP12.38□□□□□ -0.43
RPUSD3-206ENST00000433535 B5MCH6 92 aa12.37□□□□□ -0.43
RPUSD3-206ENST00000433535 LINC00483Q53H64 154 aa12.37□□□□□ -0.43
RPUSD3-206ENST00000433535 GAGE2AQ6NT46 116 aa12.37□□□□□ -0.43
RPUSD3-206ENST00000433535 FP248Q71RG6 208 aaPredicted RBP12.37□□□□□ -0.43
RPUSD3-206ENST00000433535 ERC2-IT1O76042 136 aa12.36□□□□□ -0.43
RPUSD3-206ENST00000433535 S100A12P80511 92 aa12.36□□□□□ -0.43
RPUSD3-206ENST00000433535 SCGB1D4Q6XE38 83 aa12.36□□□□□ -0.43
RPUSD3-206ENST00000433535 SCGB1D1O95968 90 aa12.35□□□□□ -0.43
RPUSD3-206ENST00000433535 DDTP30046 118 aa12.35□□□□□ -0.43
RPUSD3-206ENST00000433535 SPANXDQ9BXN6 97 aa12.34□□□□□ -0.43
RPUSD3-206ENST00000433535 SPANXCQ9NY87 97 aa12.34□□□□□ -0.43
RPUSD3-206ENST00000433535 HSBP1L1C9JCN9 74 aa12.33□□□□□ -0.44
RPUSD3-206ENST00000433535 IGLV6-57P01721 117 aa12.33□□□□□ -0.44
RPUSD3-206ENST00000433535 MOBPQ13875 183 aa12.33□□□□□ -0.44
RPUSD3-206ENST00000433535 KRTAP9-2Q9BYQ4 174 aa12.33□□□□□ -0.44
RPUSD3-206ENST00000433535 IGLV9-49A0A0B4J1Y8 123 aa12.32□□□□□ -0.44
RPUSD3-206ENST00000433535 KRTAP13-3Q3SY46 172 aa12.32□□□□□ -0.44
RPUSD3-206ENST00000433535 Q9BRP9 147 aa12.32□□□□□ -0.44
RPUSD3-206ENST00000433535 MUC17Q685J3 4493 aa12.32□□□□□ -0.44
RPUSD3-206ENST00000433535 FAT4Q6V0I7 4981 aa12.31□□□□□ -0.44
RPUSD3-206ENST00000433535 SPINK1P00995 79 aa12.31□□□□□ -0.44
RPUSD3-206ENST00000433535 Q6ZRX8 168 aa12.31□□□□□ -0.44
RPUSD3-206ENST00000433535 S100A7L2Q5SY68 101 aa12.28□□□□□ -0.44
RPUSD3-206ENST00000433535 Q6ZVH6 145 aa12.28□□□□□ -0.44
RPUSD3-206ENST00000433535 IFITM1P13164 125 aa12.26□□□□□ -0.45
RPUSD3-206ENST00000433535 JOSD1Q15040 202 aaPredicted RBP12.25□□□□□ -0.45
RPUSD3-206ENST00000433535 TRAV23DV6A0A075B6W5 121 aa12.24□□□□□ -0.45
RPUSD3-206ENST00000433535 MUSTN1Q8IVN3 82 aa12.24□□□□□ -0.45
RPUSD3-206ENST00000433535 Q8N377 158 aa12.23□□□□□ -0.45
RPUSD3-206ENST00000433535 COPS9Q8WXC6 57 aa12.23□□□□□ -0.45
RPUSD3-206ENST00000433535 TMA7Q9Y2S6 64 aaKnown RBP12.23□□□□□ -0.45
RPUSD3-206ENST00000433535 SSBP3-AS1Q7Z2R9 100 aa12.22□□□□□ -0.45
RPUSD3-206ENST00000433535 LINC00518Q8N0U6 118 aa12.22□□□□□ -0.45
RPUSD3-206ENST00000433535 COX8AP10176 69 aa12.21□□□□□ -0.45
RPUSD3-206ENST00000433535 RPS29P62273 56 aaKnown RBP12.21□□□□□ -0.45
RPUSD3-206ENST00000433535 ASB16-AS1Q495Z4 193 aa12.21□□□□□ -0.45
RPUSD3-206ENST00000433535 ZNF73O43830 326 aaPredicted RBP12.2□□□□□ -0.46
RPUSD3-206ENST00000433535 C9orf153Q5TBE3 101 aa12.2□□□□□ -0.46
RPUSD3-206ENST00000433535 OR13C6PQ8NH95 151 aa12.2□□□□□ -0.46
RPUSD3-206ENST00000433535 DLEU1O43261 78 aa12.18□□□□□ -0.46
RPUSD3-206ENST00000433535 ST20-AS1Q8NBB2 130 aa12.18□□□□□ -0.46
RPUSD3-206ENST00000433535 PAM16Q9Y3D7 125 aa12.18□□□□□ -0.46
RPUSD3-206ENST00000433535 CBY1Q9Y3M2 126 aa12.17□□□□□ -0.46
RPUSD3-206ENST00000433535 SLC25A20O43772 301 aa12.16□□□□□ -0.46
RPUSD3-206ENST00000433535 SPATA45Q537H7 98 aa12.16□□□□□ -0.46
RPUSD3-206ENST00000433535 VAMP8Q9BV40 100 aa12.16□□□□□ -0.46
RPUSD3-206ENST00000433535 KRTAP4-1Q9BYQ7 146 aa12.16□□□□□ -0.46
RPUSD3-206ENST00000433535 PYY3Q5JQD4 70 aa12.15□□□□□ -0.46
RPUSD3-206ENST00000433535 C14orf144Q96I85 54 aa12.15□□□□□ -0.46
RPUSD3-206ENST00000433535 SEC61BP60468 96 aaKnown RBP12.12□□□□□ -0.47
RPUSD3-206ENST00000433535 A6NDN8 102 aa12.1□□□□□ -0.47
RPUSD3-206ENST00000433535 A4D1N5 150 aa12.09□□□□□ -0.47
RPUSD3-206ENST00000433535 HINT1P49773 126 aaPredicted RBP12.09□□□□□ -0.47
RPUSD3-206ENST00000433535 C6orf99Q4VX62 202 aa12.08□□□□□ -0.48
RPUSD3-206ENST00000433535 SLC25A34Q6PIV7 304 aa12.08□□□□□ -0.48
RPUSD3-206ENST00000433535 HIGD1BQ9P298 99 aa12.08□□□□□ -0.48
RPUSD3-206ENST00000433535 TRAV13-2A0A0B4J235 113 aa12.07□□□□□ -0.48
RPUSD3-206ENST00000433535 ELOF1P60002 83 aaKnown RBP12.07□□□□□ -0.48
RPUSD3-206ENST00000433535 C2orf91Q6ZV80 131 aa12.07□□□□□ -0.48
RPUSD3-206ENST00000433535 HIST1H4GQ99525 98 aa12.07□□□□□ -0.48
RPUSD3-206ENST00000433535 XP32Q5T750 250 aa12.06□□□□□ -0.48
RPUSD3-206ENST00000433535 TRBV7-6A0A0J9YX20 115 aa12.05□□□□□ -0.48
RPUSD3-206ENST00000433535 COX7BP24311 80 aa12.04□□□□□ -0.48
RPUSD3-206ENST00000433535 LINC01547P58512 204 aaPredicted RBP12.04□□□□□ -0.48
RPUSD3-206ENST00000433535 SPRR1BP22528 89 aa12.03□□□□□ -0.48
RPUSD3-206ENST00000433535 HRCT1Q6UXD1 115 aa12.03□□□□□ -0.48
RPUSD3-206ENST00000433535 SMIM11BQ8TCY0 68 aa12.03□□□□□ -0.48
RPUSD3-206ENST00000433535 DHRS4-AS1Q9P1J3 65 aa12.02□□□□□ -0.49
RPUSD3-206ENST00000433535 A0A1B0GWB2 263 aa11.99□□□□□ -0.49
RPUSD3-206ENST00000433535 C12orf57Q99622 126 aa11.99□□□□□ -0.49
RPUSD3-206ENST00000433535 KRTAP9-6A0A140TA67 174 aa11.98□□□□□ -0.49
RPUSD3-206ENST00000433535 LIMD2Q9BT23 127 aa11.98□□□□□ -0.49
RPUSD3-206ENST00000433535 LAMTOR3Q9UHA4 124 aa11.98□□□□□ -0.49
RPUSD3-206ENST00000433535 TAL2Q16559 108 aa11.96□□□□□ -0.49
RPUSD3-206ENST00000433535 Q1RN00 199 aa11.96□□□□□ -0.49
RPUSD3-206ENST00000433535 DEFB105AQ8NG35 78 aa11.95□□□□□ -0.5
RPUSD3-206ENST00000433535 CFC1BP0CG36 223 aa11.94□□□□□ -0.5
RPUSD3-206ENST00000433535 CFC1P0CG37 223 aa11.94□□□□□ -0.5
RPUSD3-206ENST00000433535 C9orf92A6NGG3 77 aa11.93□□□□□ -0.5
RPUSD3-206ENST00000433535 CEND1Q8N111 149 aa11.93□□□□□ -0.5
RPUSD3-206ENST00000433535 A0A0B4J2C4 111 aa11.89□□□□□ -0.51
RPUSD3-206ENST00000433535 H7C2G1 150 aa11.89□□□□□ -0.51
RPUSD3-206ENST00000433535 TEX49A0A1B0GTD5 131 aa11.88□□□□□ -0.51
RPUSD3-206ENST00000433535 VAMP3Q15836 100 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms