RNA–Protein interactions for RNA: ENST00000429670.2

GYPB-201, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-201ENST00000429670 A0A1B0GUT8 65 aa0□□□□□ -2.41
GYPB-201ENST00000429670 PVALEFA0A1B0GWK0 134 aa0□□□□□ -2.41
GYPB-201ENST00000429670 CNOT1A5YKK6 2376 aaKnown RBP0□□□□□ -2.41
GYPB-201ENST00000429670 M0R2T5 61 aa0□□□□□ -2.41
GYPB-201ENST00000429670 FLNBO75369 2602 aaKnown RBP0□□□□□ -2.41
GYPB-201ENST00000429670 COL6A3P12111 3177 aa0□□□□□ -2.41
GYPB-201ENST00000429670 MAP1AP78559 2803 aaPredicted RBP0□□□□□ -2.41
GYPB-201ENST00000429670 HSPG2P98160 4391 aa0□□□□□ -2.41
GYPB-201ENST00000429670 C9orf62Q8N4C0 152 aa0□□□□□ -2.41
GYPB-201ENST00000429670 S100A16Q96FQ6 103 aaKnown RBP0□□□□□ -2.41
GYPB-201ENST00000429670 GAFA1Q96PS6 74 aa0□□□□□ -2.41
GYPB-201ENST00000429670 PLIN4Q96Q06 1357 aa0□□□□□ -2.41
GYPB-201ENST00000429670 CEP170BQ9Y4F5 1589 aaPredicted RBP0□□□□□ -2.41
GYPB-201ENST00000429670 TRANK1O15050 2925 aa-0□□□□□ -2.41
GYPB-201ENST00000429670 TENM2Q9NT68 2774 aa-0□□□□□ -2.41
GYPB-201ENST00000429670 LRRIQ1Q96JM4 1722 aa-0.01□□□□□ -2.41
GYPB-201ENST00000429670 MAGI3Q5TCQ9 1506 aa-0.01□□□□□ -2.41
GYPB-201ENST00000429670 UACAQ9BZF9 1416 aa-0.01□□□□□ -2.41
GYPB-201ENST00000429670 MYMXA0A1B0GTQ4 84 aa-0.01□□□□□ -2.41
GYPB-201ENST00000429670 CCL22O00626 93 aa-0.01□□□□□ -2.41
GYPB-201ENST00000429670 COX7BP24311 80 aa-0.01□□□□□ -2.41
GYPB-201ENST00000429670 GNG2P59768 71 aa-0.01□□□□□ -2.41
GYPB-201ENST00000429670 RPL38P63173 70 aaKnown RBP-0.01□□□□□ -2.41
GYPB-201ENST00000429670 ACANP16112 2415 aa-0.01□□□□□ -2.41
GYPB-201ENST00000429670 CREBBPQ92793 2442 aa-0.02□□□□□ -2.41
GYPB-201ENST00000429670 CCDC18Q5T9S5 1454 aa-0.02□□□□□ -2.41
GYPB-201ENST00000429670 CLIP1P30622 1438 aa-0.02□□□□□ -2.41
GYPB-201ENST00000429670 DEFB135Q30KP9 77 aa-0.02□□□□□ -2.41
GYPB-201ENST00000429670 RABAC1Q9UI14 185 aa-0.02□□□□□ -2.41
GYPB-201ENST00000429670 URB2Q14146 1524 aaKnown RBP-0.03□□□□□ -2.41
GYPB-201ENST00000429670 NCOA2Q15596 1464 aa-0.03□□□□□ -2.41
GYPB-201ENST00000429670 TRAV21A0A0B4J279 112 aa-0.03□□□□□ -2.41
GYPB-201ENST00000429670 SNRPFP62306 86 aaKnown RBP-0.03□□□□□ -2.41
GYPB-201ENST00000429670 LRP2P98164 4655 aa-0.03□□□□□ -2.41
GYPB-201ENST00000429670 WFDC13Q8IUB5 93 aa-0.03□□□□□ -2.41
GYPB-201ENST00000429670 AKAP13Q12802 2813 aa-0.03□□□□□ -2.41
GYPB-201ENST00000429670 NBASA2RRP1 2371 aa-0.03□□□□□ -2.41
GYPB-201ENST00000429670 KDM5DQ9BY66 1539 aa-0.03□□□□□ -2.41
GYPB-201ENST00000429670 ITSN1Q15811 1721 aa-0.04□□□□□ -2.42
GYPB-201ENST00000429670 NRAPQ86VF7 1730 aa-0.04□□□□□ -2.42
GYPB-201ENST00000429670 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.04□□□□□ -2.42
GYPB-201ENST00000429670 STAB1Q9NY15 2570 aa-0.04□□□□□ -2.42
GYPB-201ENST00000429670 CEBPZOSA8MTT3 80 aa-0.04□□□□□ -2.42
GYPB-201ENST00000429670 CDKN2A-AS1Q9UH64 79 aa-0.04□□□□□ -2.42
GYPB-201ENST00000429670 MAP3K1Q13233 1512 aa-0.04□□□□□ -2.42
GYPB-201ENST00000429670 MED14O60244 1454 aa-0.04□□□□□ -2.42
GYPB-201ENST00000429670 PDE4DIPQ5VU43 2346 aa-0.04□□□□□ -2.42
GYPB-201ENST00000429670 PARP4Q9UKK3 1724 aaKnown RBP-0.04□□□□□ -2.42
GYPB-201ENST00000429670 SETD2Q9BYW2 2564 aaPredicted RBP-0.04□□□□□ -2.42
GYPB-201ENST00000429670 CICQ96RK0 1608 aaPredicted RBP-0.05□□□□□ -2.42
GYPB-201ENST00000429670 CFAP74Q9C0B2 1584 aa-0.05□□□□□ -2.42
GYPB-201ENST00000429670 ACYP1P07311 99 aa-0.05□□□□□ -2.42
GYPB-201ENST00000429670 TDRG1Q3Y452 100 aa-0.05□□□□□ -2.42
GYPB-201ENST00000429670 LINC00643Q86TS7 51 aa-0.05□□□□□ -2.42
GYPB-201ENST00000429670 MYO5CQ9NQX4 1742 aa-0.05□□□□□ -2.42
GYPB-201ENST00000429670 ERVK-7P63135 1459 aa-0.05□□□□□ -2.42
GYPB-201ENST00000429670 SPTBN4Q9H254 2564 aa-0.05□□□□□ -2.42
GYPB-201ENST00000429670 PCNX1Q96RV3 2341 aa-0.05□□□□□ -2.42
GYPB-201ENST00000429670 IQGAP3Q86VI3 1631 aa-0.05□□□□□ -2.42
GYPB-201ENST00000429670 PTPN23Q9H3S7 1636 aa-0.05□□□□□ -2.42
GYPB-201ENST00000429670 PLXNC1O60486 1568 aa-0.06□□□□□ -2.42
GYPB-201ENST00000429670 NDUFA3O95167 84 aa-0.06□□□□□ -2.42
GYPB-201ENST00000429670 SPRR2BP35325 72 aa-0.06□□□□□ -2.42
GYPB-201ENST00000429670 DEFA5Q01523 94 aa-0.06□□□□□ -2.42
GYPB-201ENST00000429670 WIZO95785 1651 aa-0.06□□□□□ -2.42
GYPB-201ENST00000429670 PKHD1P08F94 4074 aa-0.06□□□□□ -2.42
GYPB-201ENST00000429670 ANKRD36CQ5JPF3 1778 aa-0.06□□□□□ -2.42
GYPB-201ENST00000429670 TJP1Q07157 1748 aa-0.07□□□□□ -2.42
GYPB-201ENST00000429670 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.07□□□□□ -2.42
GYPB-201ENST00000429670 TNRC18O15417 2968 aaPredicted RBP-0.07□□□□□ -2.42
GYPB-201ENST00000429670 KANTRA0A1W2PQU2 76 aa-0.07□□□□□ -2.42
GYPB-201ENST00000429670 NBEAL1Q6ZS30 2694 aa-0.07□□□□□ -2.42
GYPB-201ENST00000429670 ABCA8O94911 1581 aa-0.07□□□□□ -2.42
GYPB-201ENST00000429670 MUC2Q02817 5179 aa-0.07□□□□□ -2.42
GYPB-201ENST00000429670 PRRC2CQ9Y520 2896 aaKnown RBP-0.08□□□□□ -2.42
GYPB-201ENST00000429670 PDZD2O15018 2839 aa-0.08□□□□□ -2.42
GYPB-201ENST00000429670 HECTD1Q9ULT8 2610 aa-0.08□□□□□ -2.42
GYPB-201ENST00000429670 SRRM2Q9UQ35 2752 aaKnown RBP-0.08□□□□□ -2.42
GYPB-201ENST00000429670 STAB2Q8WWQ8 2551 aa-0.08□□□□□ -2.42
GYPB-201ENST00000429670 H0YGG7 62 aa-0.08□□□□□ -2.42
GYPB-201ENST00000429670 NREPQ16612 68 aa-0.08□□□□□ -2.42
GYPB-201ENST00000429670 KRTAP6-1Q3LI64 71 aa-0.08□□□□□ -2.42
GYPB-201ENST00000429670 ATP5EP2Q5VTU8 51 aa-0.08□□□□□ -2.42
GYPB-201ENST00000429670 COX6B2Q6YFQ2 88 aa-0.08□□□□□ -2.42
GYPB-201ENST00000429670 NHSQ6T4R5 1651 aa-0.08□□□□□ -2.42
GYPB-201ENST00000429670 ARHGAP35Q9NRY4 1499 aa-0.09□□□□□ -2.42
GYPB-201ENST00000429670 SSPOA2VEC9 5147 aa-0.09□□□□□ -2.42
GYPB-201ENST00000429670 A0A087WXM4 84 aa-0.09□□□□□ -2.42
GYPB-201ENST00000429670 H3BUT2 72 aa-0.09□□□□□ -2.42
GYPB-201ENST00000429670 NDUFB1O75438 58 aa-0.09□□□□□ -2.42
GYPB-201ENST00000429670 ADIRFQ15847 76 aa-0.09□□□□□ -2.42
GYPB-201ENST00000429670 S100A13Q99584 98 aa-0.09□□□□□ -2.42
GYPB-201ENST00000429670 ST20Q9HBF5 79 aa-0.09□□□□□ -2.42
GYPB-201ENST00000429670 DEPDC5O75140 1603 aa-0.09□□□□□ -2.42
GYPB-201ENST00000429670 CCDC88BA6NC98 1476 aa-0.1□□□□□ -2.42
GYPB-201ENST00000429670 FLGP20930 4061 aaPredicted RBP-0.1□□□□□ -2.42
GYPB-201ENST00000429670 ZC3H13Q5T200 1668 aaKnown RBP-0.1□□□□□ -2.43
GYPB-201ENST00000429670 UMAD1C9J7I0 102 aa-0.1□□□□□ -2.43
GYPB-201ENST00000429670 NDUFA4O00483 81 aa-0.1□□□□□ -2.43
GYPB-201ENST00000429670 IFI27P40305 119 aaPredicted RBP-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms