RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 Q8N3U1 123 aa7.29□□□□□ -1.24
TCOF1-204ENST00000427724 IGLV5-45A0A087WSX0 123 aa7.29□□□□□ -1.24
TCOF1-204ENST00000427724 VPS13CQ709C8 3753 aa7.28□□□□□ -1.24
TCOF1-204ENST00000427724 A0A1B0GUV1 79 aa7.28□□□□□ -1.24
TCOF1-204ENST00000427724 H3BNG1 76 aa7.28□□□□□ -1.24
TCOF1-204ENST00000427724 RTL8CO15255 209 aa7.28□□□□□ -1.24
TCOF1-204ENST00000427724 PRR4Q16378 134 aa7.28□□□□□ -1.24
TCOF1-204ENST00000427724 SMR3BP02814 79 aaPredicted RBP7.28□□□□□ -1.24
TCOF1-204ENST00000427724 PRO0628Q9UI54 55 aa7.28□□□□□ -1.24
TCOF1-204ENST00000427724 PDE6GP18545 87 aa7.27□□□□□ -1.24
TCOF1-204ENST00000427724 BPY2O14599 106 aa7.27□□□□□ -1.25
TCOF1-204ENST00000427724 M0R378 163 aa7.27□□□□□ -1.25
TCOF1-204ENST00000427724 Q6ZRU5 148 aa7.27□□□□□ -1.25
TCOF1-204ENST00000427724 DNAH10OSP0CZ25 163 aa7.27□□□□□ -1.25
TCOF1-204ENST00000427724 H0Y9J4 135 aa7.26□□□□□ -1.25
TCOF1-204ENST00000427724 Q8N814 137 aa7.26□□□□□ -1.25
TCOF1-204ENST00000427724 IGHV3OR16-9A0A0B4J2B5 98 aa7.26□□□□□ -1.25
TCOF1-204ENST00000427724 ZNF706Q9Y5V0 76 aaPredicted RBP7.26□□□□□ -1.25
TCOF1-204ENST00000427724 NDUFC1O43677 76 aa7.25□□□□□ -1.25
TCOF1-204ENST00000427724 CASC10Q5T4H9 136 aa7.25□□□□□ -1.25
TCOF1-204ENST00000427724 CIRBP-AS1Q8TBR5 109 aa7.25□□□□□ -1.25
TCOF1-204ENST00000427724 NF1P21359 2839 aa7.25□□□□□ -1.25
TCOF1-204ENST00000427724 A8MTW9 85 aa7.25□□□□□ -1.25
TCOF1-204ENST00000427724 CSNK1G2-AS1Q8NCQ2 148 aa7.24□□□□□ -1.25
TCOF1-204ENST00000427724 SPTSSBQ8NFR3 76 aa7.24□□□□□ -1.25
TCOF1-204ENST00000427724 LINC01561Q8N1V8 128 aa7.24□□□□□ -1.25
TCOF1-204ENST00000427724 FAM19A3Q7Z5A8 133 aa7.23□□□□□ -1.25
TCOF1-204ENST00000427724 TRBV7-6A0A0J9YX20 115 aa7.23□□□□□ -1.25
TCOF1-204ENST00000427724 FBN2P35556 2912 aa7.22□□□□□ -1.25
TCOF1-204ENST00000427724 GIG44P09565 113 aaPredicted RBP7.22□□□□□ -1.25
TCOF1-204ENST00000427724 LINC00476Q8WZB0 136 aa7.21□□□□□ -1.25
TCOF1-204ENST00000427724 Q6ZVQ6 151 aa7.21□□□□□ -1.25
TCOF1-204ENST00000427724 TRBV10-3A0A0K0K1G6 114 aa7.21□□□□□ -1.26
TCOF1-204ENST00000427724 ATP5EP56381 51 aaPredicted RBP7.21□□□□□ -1.26
TCOF1-204ENST00000427724 LINC01547P58512 204 aaPredicted RBP7.21□□□□□ -1.26
TCOF1-204ENST00000427724 C2orf48Q96LS8 159 aa7.21□□□□□ -1.26
TCOF1-204ENST00000427724 CHTF8P0CG12 524 aa7.2□□□□□ -1.26
TCOF1-204ENST00000427724 COX17Q14061 63 aa7.2□□□□□ -1.26
TCOF1-204ENST00000427724 ZNF73O43830 326 aaPredicted RBP7.2□□□□□ -1.26
TCOF1-204ENST00000427724 PLA2G1BP04054 148 aaKnown RBP7.2□□□□□ -1.26
TCOF1-204ENST00000427724 LINC00336Q6ZUF6 198 aa7.19□□□□□ -1.26
TCOF1-204ENST00000427724 C9orf129Q5T035 196 aaKnown RBP7.19□□□□□ -1.26
TCOF1-204ENST00000427724 Q8N9L7 120 aa7.19□□□□□ -1.26
TCOF1-204ENST00000427724 MRPL55Q7Z7F7 128 aaKnown RBP7.19□□□□□ -1.26
TCOF1-204ENST00000427724 TMEM254Q8TBM7 123 aa7.19□□□□□ -1.26
TCOF1-204ENST00000427724 H3BQ85 93 aa7.18□□□□□ -1.26
TCOF1-204ENST00000427724 MP68P56378 58 aa7.18□□□□□ -1.26
TCOF1-204ENST00000427724 PRLHP81277 87 aa7.18□□□□□ -1.26
TCOF1-204ENST00000427724 REG3GQ6UW15 175 aa7.18□□□□□ -1.26
TCOF1-204ENST00000427724 APLNQ9ULZ1 77 aa7.18□□□□□ -1.26
TCOF1-204ENST00000427724 FAM30AQ9NZY2 134 aa7.18□□□□□ -1.26
TCOF1-204ENST00000427724 PSPHP1O15172 72 aa7.17□□□□□ -1.26
TCOF1-204ENST00000427724 SEC61GP60059 68 aa7.17□□□□□ -1.26
TCOF1-204ENST00000427724 FAM104AQ969W3 186 aa7.17□□□□□ -1.26
TCOF1-204ENST00000427724 WIPF1O43516 503 aa7.16□□□□□ -1.26
TCOF1-204ENST00000427724 PRYO14603 147 aa7.15□□□□□ -1.26
TCOF1-204ENST00000427724 DHRS4-AS1Q9P1J3 65 aa7.15□□□□□ -1.26
TCOF1-204ENST00000427724 C22orf24Q9Y442 160 aa7.15□□□□□ -1.26
TCOF1-204ENST00000427724 CYSTM1Q9H1C7 97 aa7.15□□□□□ -1.26
TCOF1-204ENST00000427724 C10orf25Q5T742 122 aa7.15□□□□□ -1.27
TCOF1-204ENST00000427724 A0A087WTM6 91 aa7.14□□□□□ -1.27
TCOF1-204ENST00000427724 RPL37AP61513 92 aaKnown RBP7.13□□□□□ -1.27
TCOF1-204ENST00000427724 PHF5AQ7RTV0 110 aaKnown RBP7.13□□□□□ -1.27
TCOF1-204ENST00000427724 LINC00575Q6W349 94 aa7.13□□□□□ -1.27
TCOF1-204ENST00000427724 TNP2Q05952 138 aa7.12□□□□□ -1.27
TCOF1-204ENST00000427724 Q6ZRP5 223 aa7.12□□□□□ -1.27
TCOF1-204ENST00000427724 PMAIP1Q13794 54 aa7.12□□□□□ -1.27
TCOF1-204ENST00000427724 OTOGQ6ZRI0 2925 aa7.12□□□□□ -1.27
TCOF1-204ENST00000427724 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.1□□□□□ -1.27
TCOF1-204ENST00000427724 WFDC13Q8IUB5 93 aa7.1□□□□□ -1.27
TCOF1-204ENST00000427724 LINC01600Q96MT4 127 aa7.1□□□□□ -1.27
TCOF1-204ENST00000427724 F8WDY8 70 aa7.1□□□□□ -1.27
TCOF1-204ENST00000427724 CHKB-CPT1BH3BT56 60 aa7.09□□□□□ -1.27
TCOF1-204ENST00000427724 EPM2AB3EWF7 344 aa7.09□□□□□ -1.28
TCOF1-204ENST00000427724 C6orf48Q9UBA6 75 aa7.09□□□□□ -1.28
TCOF1-204ENST00000427724 H7BZZ5 65 aa7.08□□□□□ -1.28
TCOF1-204ENST00000427724 LINC00167Q96N53 147 aa7.08□□□□□ -1.28
TCOF1-204ENST00000427724 Q6ZQT0 140 aa7.08□□□□□ -1.28
TCOF1-204ENST00000427724 CXCL6P80162 114 aa7.07□□□□□ -1.28
TCOF1-204ENST00000427724 KRTAP21-3Q3LHN1 58 aa7.07□□□□□ -1.28
TCOF1-204ENST00000427724 SPACA4Q8TDM5 124 aa7.07□□□□□ -1.28
TCOF1-204ENST00000427724 A6NED7 52 aa7.06□□□□□ -1.28
TCOF1-204ENST00000427724 MXRA5Q9NR99 2828 aa7.06□□□□□ -1.28
TCOF1-204ENST00000427724 IGKV4-1P06312 121 aa7.05□□□□□ -1.28
TCOF1-204ENST00000427724 TYMSOSQ8TAI1 123 aa7.05□□□□□ -1.28
TCOF1-204ENST00000427724 Q9BRP9 147 aa7.05□□□□□ -1.28
TCOF1-204ENST00000427724 PKD1L1Q8TDX9 2849 aa7.05□□□□□ -1.28
TCOF1-204ENST00000427724 LCE6AA0A183 80 aa7.03□□□□□ -1.28
TCOF1-204ENST00000427724 Q5XG85 94 aa7.03□□□□□ -1.28
TCOF1-204ENST00000427724 BCE1O60756 84 aa7.03□□□□□ -1.28
TCOF1-204ENST00000427724 OXTP01178 125 aa7.03□□□□□ -1.28
TCOF1-204ENST00000427724 LINC00208Q96KT6 92 aa7.03□□□□□ -1.28
TCOF1-204ENST00000427724 KLKP1Q107X0 134 aa7.02□□□□□ -1.29
TCOF1-204ENST00000427724 SMIM29Q86T20 159 aa7.02□□□□□ -1.29
TCOF1-204ENST00000427724 ZNF469Q96JG9 3925 aaPredicted RBP7.02□□□□□ -1.29
TCOF1-204ENST00000427724 MOBPQ13875 183 aa7.01□□□□□ -1.29
TCOF1-204ENST00000427724 KIAA0087Q14695 138 aa7.01□□□□□ -1.29
TCOF1-204ENST00000427724 LINC00612Q8N6U2 182 aa7.01□□□□□ -1.29
TCOF1-204ENST00000427724 PRR15LQ9BU68 103 aa7.01□□□□□ -1.29
TCOF1-204ENST00000427724 DEFB116Q30KQ4 102 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms