RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 LCE2AQ5TA79 106 aaPredicted RBP9.93□□□□□ -0.82
MSH6-203ENST00000420813 PPDPFQ9H3Y8 114 aa9.93□□□□□ -0.82
MSH6-203ENST00000420813 NCR3O14931 201 aa9.92□□□□□ -0.82
MSH6-203ENST00000420813 ANKRD39Q53RE8 183 aa9.92□□□□□ -0.82
MSH6-203ENST00000420813 FP248Q71RG6 208 aaPredicted RBP9.92□□□□□ -0.82
MSH6-203ENST00000420813 MIEN1Q9BRT3 115 aa9.92□□□□□ -0.82
MSH6-203ENST00000420813 KRTAP4-16G5E9R7 235 aaPredicted RBP9.91□□□□□ -0.82
MSH6-203ENST00000420813 HERVK_113P61574 105 aa9.91□□□□□ -0.82
MSH6-203ENST00000420813 C4orf48Q5BLP8 95 aa9.91□□□□□ -0.82
MSH6-203ENST00000420813 NDUFA12Q9UI09 145 aa9.91□□□□□ -0.82
MSH6-203ENST00000420813 MYMXA0A1B0GTQ4 84 aa9.9□□□□□ -0.82
MSH6-203ENST00000420813 ETDCA0A1B0GVM5 59 aa9.9□□□□□ -0.82
MSH6-203ENST00000420813 COX8AP10176 69 aa9.89□□□□□ -0.83
MSH6-203ENST00000420813 SLC25A34Q6PIV7 304 aa9.89□□□□□ -0.83
MSH6-203ENST00000420813 SMCR5Q8TEV8 140 aa9.89□□□□□ -0.83
MSH6-203ENST00000420813 TRBV10-3A0A0K0K1G6 114 aa9.88□□□□□ -0.83
MSH6-203ENST00000420813 Q8NBF4 154 aa9.88□□□□□ -0.83
MSH6-203ENST00000420813 NMUP48645 174 aa9.87□□□□□ -0.83
MSH6-203ENST00000420813 LINC00483Q53H64 154 aa9.87□□□□□ -0.83
MSH6-203ENST00000420813 C14orf144Q96I85 54 aa9.87□□□□□ -0.83
MSH6-203ENST00000420813 LOC107984156A0A0G2JMH3 177 aa9.86□□□□□ -0.83
MSH6-203ENST00000420813 SPINK1P00995 79 aa9.86□□□□□ -0.83
MSH6-203ENST00000420813 ARL17AQ8IVW1 177 aa9.86□□□□□ -0.83
MSH6-203ENST00000420813 DAND5Q8N907 189 aa9.86□□□□□ -0.83
MSH6-203ENST00000420813 E9PLD3 99 aa9.85□□□□□ -0.83
MSH6-203ENST00000420813 KRTAP9-2Q9BYQ4 174 aa9.85□□□□□ -0.83
MSH6-203ENST00000420813 TRBV10-2A0A0K0K1G8 114 aa9.84□□□□□ -0.83
MSH6-203ENST00000420813 B5MCH6 92 aa9.84□□□□□ -0.83
MSH6-203ENST00000420813 LEPROTO15243 131 aa9.84□□□□□ -0.83
MSH6-203ENST00000420813 DLEU1O43261 78 aa9.84□□□□□ -0.83
MSH6-203ENST00000420813 TSPEAR-AS2P59090 65 aa9.84□□□□□ -0.83
MSH6-203ENST00000420813 KRTAP13-3Q3SY46 172 aa9.82□□□□□ -0.84
MSH6-203ENST00000420813 GAGE2AQ6NT46 116 aa9.81□□□□□ -0.84
MSH6-203ENST00000420813 J3QQQ9 107 aa9.8□□□□□ -0.84
MSH6-203ENST00000420813 RPS29P62273 56 aaKnown RBP9.8□□□□□ -0.84
MSH6-203ENST00000420813 PCP2Q8IVA1 136 aa9.8□□□□□ -0.84
MSH6-203ENST00000420813 SPANXB1Q9NS25 103 aaPredicted RBP9.8□□□□□ -0.84
MSH6-203ENST00000420813 ERC2-IT1O76042 136 aa9.79□□□□□ -0.84
MSH6-203ENST00000420813 Q6ZRX8 168 aa9.79□□□□□ -0.84
MSH6-203ENST00000420813 SSBP3-AS1Q7Z2R9 100 aa9.79□□□□□ -0.84
MSH6-203ENST00000420813 NDUFC2O95298 119 aa9.78□□□□□ -0.84
MSH6-203ENST00000420813 LGALS3P17931 250 aaKnown RBP9.78□□□□□ -0.84
MSH6-203ENST00000420813 MOBPQ13875 183 aa9.78□□□□□ -0.84
MSH6-203ENST00000420813 C2orf91Q6ZV80 131 aa9.78□□□□□ -0.84
MSH6-203ENST00000420813 Q9BRP9 147 aa9.78□□□□□ -0.84
MSH6-203ENST00000420813 ZNF815PA8K554 130 aa9.77□□□□□ -0.85
MSH6-203ENST00000420813 ASB16-AS1Q495Z4 193 aa9.77□□□□□ -0.85
MSH6-203ENST00000420813 HIGD1BQ9P298 99 aa9.77□□□□□ -0.85
MSH6-203ENST00000420813 IGLV9-49A0A0B4J1Y8 123 aa9.76□□□□□ -0.85
MSH6-203ENST00000420813 IGLV6-57P01721 117 aa9.76□□□□□ -0.85
MSH6-203ENST00000420813 TTTY13Q9BZ97 58 aa9.76□□□□□ -0.85
MSH6-203ENST00000420813 M0R143 59 aa9.75□□□□□ -0.85
MSH6-203ENST00000420813 HSD52Q0P140 79 aa9.75□□□□□ -0.85
MSH6-203ENST00000420813 S100A7L2Q5SY68 101 aa9.75□□□□□ -0.85
MSH6-203ENST00000420813 Q8N377 158 aa9.74□□□□□ -0.85
MSH6-203ENST00000420813 TRAV23DV6A0A075B6W5 121 aa9.73□□□□□ -0.85
MSH6-203ENST00000420813 SLC25A20O43772 301 aa9.72□□□□□ -0.85
MSH6-203ENST00000420813 SCGB1D4Q6XE38 83 aa9.72□□□□□ -0.85
MSH6-203ENST00000420813 SEC61BP60468 96 aaKnown RBP9.71□□□□□ -0.86
MSH6-203ENST00000420813 SNHG12Q9BXW3 62 aa9.71□□□□□ -0.86
MSH6-203ENST00000420813 ZNF73O43830 326 aaPredicted RBP9.7□□□□□ -0.86
MSH6-203ENST00000420813 SOSTDC1Q6X4U4 206 aa9.7□□□□□ -0.86
MSH6-203ENST00000420813 A0A0J9YXY3 114 aa9.69□□□□□ -0.86
MSH6-203ENST00000420813 HINT1P49773 126 aaPredicted RBP9.69□□□□□ -0.86
MSH6-203ENST00000420813 BATFQ16520 125 aa9.69□□□□□ -0.86
MSH6-203ENST00000420813 TAL2Q16559 108 aa9.69□□□□□ -0.86
MSH6-203ENST00000420813 CBY1Q9Y3M2 126 aa9.69□□□□□ -0.86
MSH6-203ENST00000420813 ADAMTSL4-AS1Q5T5F5 129 aa9.68□□□□□ -0.86
MSH6-203ENST00000420813 EIF4EBP3O60516 100 aaPredicted RBP9.67□□□□□ -0.86
MSH6-203ENST00000420813 BVES-AS1Q5T3Y7 98 aa9.67□□□□□ -0.86
MSH6-203ENST00000420813 C9orf153Q5TBE3 101 aa9.67□□□□□ -0.86
MSH6-203ENST00000420813 NPC2P61916 151 aa9.66□□□□□ -0.86
MSH6-203ENST00000420813 COL5A1-AS1Q5SY13 56 aa9.65□□□□□ -0.86
MSH6-203ENST00000420813 HIST1H4GQ99525 98 aa9.65□□□□□ -0.86
MSH6-203ENST00000420813 LINC01547P58512 204 aaPredicted RBP9.64□□□□□ -0.87
MSH6-203ENST00000420813 XP32Q5T750 250 aa9.64□□□□□ -0.87
MSH6-203ENST00000420813 ST20-AS1Q8NBB2 130 aa9.64□□□□□ -0.87
MSH6-203ENST00000420813 KRTAP4-1Q9BYQ7 146 aa9.64□□□□□ -0.87
MSH6-203ENST00000420813 SPANXCQ9NY87 97 aa9.64□□□□□ -0.87
MSH6-203ENST00000420813 TIMM17BO60830 172 aa9.63□□□□□ -0.87
MSH6-203ENST00000420813 A6NDN8 102 aa9.62□□□□□ -0.87
MSH6-203ENST00000420813 CEND1Q8N111 149 aa9.62□□□□□ -0.87
MSH6-203ENST00000420813 TMEM238LA0A1B0GVL6 79 aa9.61□□□□□ -0.87
MSH6-203ENST00000420813 A6NJY4 79 aa9.61□□□□□ -0.87
MSH6-203ENST00000420813 SPRR1BP22528 89 aa9.61□□□□□ -0.87
MSH6-203ENST00000420813 LINC00308Q8TCZ7 52 aa9.61□□□□□ -0.87
MSH6-203ENST00000420813 LITAFQ99732 161 aa9.61□□□□□ -0.87
MSH6-203ENST00000420813 Q6ZVH6 145 aa9.6□□□□□ -0.87
MSH6-203ENST00000420813 SPANXDQ9BXN6 97 aa9.6□□□□□ -0.87
MSH6-203ENST00000420813 FXYD2P54710 66 aa9.59□□□□□ -0.87
MSH6-203ENST00000420813 DHRS4-AS1Q9P1J3 65 aa9.59□□□□□ -0.87
MSH6-203ENST00000420813 KRTAP9-6A0A140TA67 174 aa9.58□□□□□ -0.88
MSH6-203ENST00000420813 OR13C6PQ8NH95 151 aa9.58□□□□□ -0.88
MSH6-203ENST00000420813 LIMD2Q9BT23 127 aa9.58□□□□□ -0.88
MSH6-203ENST00000420813 COPS9Q8WXC6 57 aa9.56□□□□□ -0.88
MSH6-203ENST00000420813 LAMTOR3Q9UHA4 124 aa9.55□□□□□ -0.88
MSH6-203ENST00000420813 IFITM1P13164 125 aa9.54□□□□□ -0.88
MSH6-203ENST00000420813 ELOF1P60002 83 aaKnown RBP9.54□□□□□ -0.88
MSH6-203ENST00000420813 NHP2Q9NX24 153 aaKnown RBP9.54□□□□□ -0.88
MSH6-203ENST00000420813 A0A1B0GWB2 263 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms