RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 OBSCN-AS1Q96MR7 158 aa13.41□□□□□ -0.26
GPC1-202ENST00000420138 C16orf90A8MZG2 172 aa13.4□□□□□ -0.26
GPC1-202ENST00000420138 C7orf33Q8WU49 177 aa13.4□□□□□ -0.26
GPC1-202ENST00000420138 NKAPP1Q8N9T2 125 aa13.38□□□□□ -0.27
GPC1-202ENST00000420138 TMEM256-PLSCR3K7ERE1 68 aa13.36□□□□□ -0.27
GPC1-202ENST00000420138 ZNF73O43830 326 aaPredicted RBP13.36□□□□□ -0.27
GPC1-202ENST00000420138 DIRC1Q969H9 104 aa13.36□□□□□ -0.27
GPC1-202ENST00000420138 hADV29S1A0JD25 119 aa13.36□□□□□ -0.27
GPC1-202ENST00000420138 DNAH17Q9UFH2 4485 aa13.35□□□□□ -0.27
GPC1-202ENST00000420138 SDIM1Q6ZPB5 146 aa13.35□□□□□ -0.27
GPC1-202ENST00000420138 IGKV2-24A0A0C4DH68 120 aa13.34□□□□□ -0.27
GPC1-202ENST00000420138 FAM19A5Q7Z5A7 132 aaPredicted RBP13.34□□□□□ -0.27
GPC1-202ENST00000420138 LCE6AA0A183 80 aa13.34□□□□□ -0.27
GPC1-202ENST00000420138 KCNQ1DNQ9H478 68 aa13.34□□□□□ -0.27
GPC1-202ENST00000420138 C14orf132Q9NPU4 83 aa13.34□□□□□ -0.27
GPC1-202ENST00000420138 A0A1W2PNN7 141 aa13.33□□□□□ -0.28
GPC1-202ENST00000420138 GAGE2AQ6NT46 116 aa13.33□□□□□ -0.28
GPC1-202ENST00000420138 TRBV7-6A0A0J9YX20 115 aa13.32□□□□□ -0.28
GPC1-202ENST00000420138 CHTF8P0CG12 524 aa13.32□□□□□ -0.28
GPC1-202ENST00000420138 IGLV1-50A0A075B6I6 118 aa13.31□□□□□ -0.28
GPC1-202ENST00000420138 JMJD7-PLA2G4BH0Y9G9 81 aa13.31□□□□□ -0.28
GPC1-202ENST00000420138 COX7BP24311 80 aa13.3□□□□□ -0.28
GPC1-202ENST00000420138 ELOF1P60002 83 aaKnown RBP13.3□□□□□ -0.28
GPC1-202ENST00000420138 MRPL55Q7Z7F7 128 aaKnown RBP13.3□□□□□ -0.28
GPC1-202ENST00000420138 HYDINQ4G0P3 5121 aa13.3□□□□□ -0.28
GPC1-202ENST00000420138 RPL37AP8A6NKH3 93 aa13.29□□□□□ -0.28
GPC1-202ENST00000420138 FUSP35637 526 aaKnown RBP eCLIP13.28□□□□□ -0.28
GPC1-202ENST00000420138 Q6Q795 121 aa13.28□□□□□ -0.28
GPC1-202ENST00000420138 PANO1I0J062 215 aa13.27□□□□□ -0.28
GPC1-202ENST00000420138 H3BQ85 93 aa13.27□□□□□ -0.29
GPC1-202ENST00000420138 RTL8CO15255 209 aa13.27□□□□□ -0.29
GPC1-202ENST00000420138 HECTD4Q9Y4D8 3996 aa13.26□□□□□ -0.29
GPC1-202ENST00000420138 KRTAP4-16G5E9R7 235 aaPredicted RBP13.25□□□□□ -0.29
GPC1-202ENST00000420138 SPRR1AP35321 89 aa13.25□□□□□ -0.29
GPC1-202ENST00000420138 TNP2Q05952 138 aa13.25□□□□□ -0.29
GPC1-202ENST00000420138 LINC00528Q8N1L1 170 aa13.25□□□□□ -0.29
GPC1-202ENST00000420138 SMCR5Q8TEV8 140 aa13.25□□□□□ -0.29
GPC1-202ENST00000420138 LINC00643Q86TS7 51 aa13.25□□□□□ -0.29
GPC1-202ENST00000420138 PKIGQ9Y2B9 76 aa13.25□□□□□ -0.29
GPC1-202ENST00000420138 Q6ZQY7 126 aa13.24□□□□□ -0.29
GPC1-202ENST00000420138 A0A1B0GV72 72 aa13.23□□□□□ -0.29
GPC1-202ENST00000420138 PRYO14603 147 aa13.23□□□□□ -0.29
GPC1-202ENST00000420138 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.23□□□□□ -0.29
GPC1-202ENST00000420138 CCKP06307 115 aa13.22□□□□□ -0.29
GPC1-202ENST00000420138 SACSQ9NZJ4 4579 aa13.21□□□□□ -0.29
GPC1-202ENST00000420138 FRAS1Q86XX4 4008 aa13.21□□□□□ -0.29
GPC1-202ENST00000420138 TRBV7-7A0A0K0K1E9 115 aa13.2□□□□□ -0.3
GPC1-202ENST00000420138 GHRHP01286 108 aa13.2□□□□□ -0.3
GPC1-202ENST00000420138 LINC00474Q9P2X8 69 aa13.2□□□□□ -0.3
GPC1-202ENST00000420138 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.2□□□□□ -0.3
GPC1-202ENST00000420138 DNAH11Q96DT5 4516 aa13.2□□□□□ -0.3
GPC1-202ENST00000420138 SPACA4Q8TDM5 124 aa13.19□□□□□ -0.3
GPC1-202ENST00000420138 LAMTOR3Q9UHA4 124 aa13.18□□□□□ -0.3
GPC1-202ENST00000420138 EPM2AB3EWF7 344 aa13.18□□□□□ -0.3
GPC1-202ENST00000420138 B5MCH6 92 aa13.17□□□□□ -0.3
GPC1-202ENST00000420138 RBM3P98179 157 aaKnown RBP13.17□□□□□ -0.3
GPC1-202ENST00000420138 PHF5AQ7RTV0 110 aaKnown RBP13.17□□□□□ -0.3
GPC1-202ENST00000420138 KRTAP11-1Q8IUC1 163 aa13.17□□□□□ -0.3
GPC1-202ENST00000420138 IMUPQ9GZP8 106 aa13.17□□□□□ -0.3
GPC1-202ENST00000420138 FAT2Q9NYQ8 4349 aa13.16□□□□□ -0.3
GPC1-202ENST00000420138 IGLV5-52A0A0A0MRZ9 124 aa13.16□□□□□ -0.3
GPC1-202ENST00000420138 Q6ZRX8 168 aa13.16□□□□□ -0.3
GPC1-202ENST00000420138 LINC00846Q9NV44 126 aa13.16□□□□□ -0.3
GPC1-202ENST00000420138 REG3GQ6UW15 175 aa13.14□□□□□ -0.31
GPC1-202ENST00000420138 Q9BRP9 147 aa13.13□□□□□ -0.31
GPC1-202ENST00000420138 DNAH5Q8TE73 4624 aa13.12□□□□□ -0.31
GPC1-202ENST00000420138 LOC110117498A0A087WWA1 95 aa13.12□□□□□ -0.31
GPC1-202ENST00000420138 ETDCA0A1B0GVM5 59 aa13.12□□□□□ -0.31
GPC1-202ENST00000420138 NDUFV3P56181 108 aaKnown RBP13.11□□□□□ -0.31
GPC1-202ENST00000420138 KRTAP10-2P60368 255 aa13.11□□□□□ -0.31
GPC1-202ENST00000420138 Q6ZQT0 140 aa13.1□□□□□ -0.31
GPC1-202ENST00000420138 DSCR8Q96T75 97 aa13.09□□□□□ -0.31
GPC1-202ENST00000420138 ANAPC13Q9BS18 74 aa13.09□□□□□ -0.31
GPC1-202ENST00000420138 PDE6GP18545 87 aa13.09□□□□□ -0.31
GPC1-202ENST00000420138 Q6JHZ5 121 aa13.08□□□□□ -0.32
GPC1-202ENST00000420138 DPH3Q96FX2 82 aa13.08□□□□□ -0.32
GPC1-202ENST00000420138 DHRS4-AS1Q9P1J3 65 aa13.07□□□□□ -0.32
GPC1-202ENST00000420138 KMT2CQ8NEZ4 4911 aaKnown RBP13.07□□□□□ -0.32
GPC1-202ENST00000420138 UBE2BP63146 152 aa13.06□□□□□ -0.32
GPC1-202ENST00000420138 LINC00336Q6ZUF6 198 aa13.06□□□□□ -0.32
GPC1-202ENST00000420138 PKD1P98161 4303 aa13.06□□□□□ -0.32
GPC1-202ENST00000420138 ERC2-IT1O76042 136 aa13.04□□□□□ -0.32
GPC1-202ENST00000420138 PLAC8Q9NZF1 115 aa13.04□□□□□ -0.32
GPC1-202ENST00000420138 DNAH8Q96JB1 4490 aa13.04□□□□□ -0.32
GPC1-202ENST00000420138 LINC01547P58512 204 aaPredicted RBP13.03□□□□□ -0.32
GPC1-202ENST00000420138 TRBV7-4A0A0J9YYF1 115 aa13.02□□□□□ -0.33
GPC1-202ENST00000420138 PRLHP81277 87 aa13.02□□□□□ -0.33
GPC1-202ENST00000420138 FAM19A1Q7Z5A9 133 aa13.02□□□□□ -0.33
GPC1-202ENST00000420138 RYR2Q92736 4967 aa13.01□□□□□ -0.33
GPC1-202ENST00000420138 IGKV3D-7A0A0C4DH55 119 aa13□□□□□ -0.33
GPC1-202ENST00000420138 Q8N377 158 aa12.99□□□□□ -0.33
GPC1-202ENST00000420138 ST20-AS1Q8NBB2 130 aa12.99□□□□□ -0.33
GPC1-202ENST00000420138 UBL5Q9BZL1 73 aa12.99□□□□□ -0.33
GPC1-202ENST00000420138 FAM236AA0A1B0GUQ0 79 aa12.99□□□□□ -0.33
GPC1-202ENST00000420138 FAM236BA0A1B0GV22 79 aa12.99□□□□□ -0.33
GPC1-202ENST00000420138 FAM30AQ9NZY2 134 aa12.97□□□□□ -0.33
GPC1-202ENST00000420138 IGLV5-48A0A075B6I7 105 aa12.97□□□□□ -0.33
GPC1-202ENST00000420138 ATP5EP2Q5VTU8 51 aa12.97□□□□□ -0.33
GPC1-202ENST00000420138 H0Y9J4 135 aa12.96□□□□□ -0.33
GPC1-202ENST00000420138 DEFB105AQ8NG35 78 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms