RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 ZNF815PA8K554 130 aa9.49□□□□□ -0.89
LINC00404-201ENST00000418660 LINC00308Q8TCZ7 52 aa9.49□□□□□ -0.89
LINC00404-201ENST00000418660 Q9BRP9 147 aa9.49□□□□□ -0.89
LINC00404-201ENST00000418660 ERC2-IT1O76042 136 aa9.48□□□□□ -0.89
LINC00404-201ENST00000418660 GAGE2AQ6NT46 116 aa9.48□□□□□ -0.89
LINC00404-201ENST00000418660 SPANXCQ9NY87 97 aa9.48□□□□□ -0.89
LINC00404-201ENST00000418660 RNF213Q63HN8 5207 aa9.47□□□□□ -0.89
LINC00404-201ENST00000418660 ZNF73O43830 326 aaPredicted RBP9.47□□□□□ -0.89
LINC00404-201ENST00000418660 JOSD1Q15040 202 aaPredicted RBP9.47□□□□□ -0.89
LINC00404-201ENST00000418660 C4orf48Q5BLP8 95 aa9.47□□□□□ -0.89
LINC00404-201ENST00000418660 TTTY13Q9BZ97 58 aa9.47□□□□□ -0.89
LINC00404-201ENST00000418660 CBY1Q9Y3M2 126 aa9.47□□□□□ -0.89
LINC00404-201ENST00000418660 C20orf202A1L168 122 aa9.46□□□□□ -0.9
LINC00404-201ENST00000418660 Q8NBF4 154 aa9.45□□□□□ -0.9
LINC00404-201ENST00000418660 IGLV7-46A0A075B6I9 117 aa9.43□□□□□ -0.9
LINC00404-201ENST00000418660 HINT1P49773 126 aaPredicted RBP9.43□□□□□ -0.9
LINC00404-201ENST00000418660 OR13C6PQ8NH95 151 aa9.43□□□□□ -0.9
LINC00404-201ENST00000418660 SPANXDQ9BXN6 97 aa9.42□□□□□ -0.9
LINC00404-201ENST00000418660 SPINK1P00995 79 aa9.41□□□□□ -0.9
LINC00404-201ENST00000418660 AKR1D1P51857 326 aa9.41□□□□□ -0.9
LINC00404-201ENST00000418660 TPRXLQ17RH7 258 aa9.41□□□□□ -0.9
LINC00404-201ENST00000418660 ANKRD39Q53RE8 183 aa9.41□□□□□ -0.9
LINC00404-201ENST00000418660 SCGB1D4Q6XE38 83 aa9.41□□□□□ -0.9
LINC00404-201ENST00000418660 SSBP3-AS1Q7Z2R9 100 aa9.41□□□□□ -0.9
LINC00404-201ENST00000418660 IGLV9-49A0A0B4J1Y8 123 aa9.4□□□□□ -0.9
LINC00404-201ENST00000418660 C5orf52A6NGY3 159 aa9.4□□□□□ -0.9
LINC00404-201ENST00000418660 MOBPQ13875 183 aa9.4□□□□□ -0.9
LINC00404-201ENST00000418660 LINC00518Q8N0U6 118 aa9.4□□□□□ -0.9
LINC00404-201ENST00000418660 ATOH7Q8N100 152 aa9.4□□□□□ -0.9
LINC00404-201ENST00000418660 FP248Q71RG6 208 aaPredicted RBP9.37□□□□□ -0.91
LINC00404-201ENST00000418660 ST20-AS1Q8NBB2 130 aa9.37□□□□□ -0.91
LINC00404-201ENST00000418660 COPS9Q8WXC6 57 aa9.37□□□□□ -0.91
LINC00404-201ENST00000418660 CDIP1Q9H305 208 aa9.37□□□□□ -0.91
LINC00404-201ENST00000418660 IFITM1P13164 125 aa9.36□□□□□ -0.91
LINC00404-201ENST00000418660 S100A1P23297 94 aa9.36□□□□□ -0.91
LINC00404-201ENST00000418660 Q6ZVH6 145 aa9.36□□□□□ -0.91
LINC00404-201ENST00000418660 SNRPEP62304 92 aaKnown RBP9.35□□□□□ -0.91
LINC00404-201ENST00000418660 PCP2Q8IVA1 136 aa9.35□□□□□ -0.91
LINC00404-201ENST00000418660 DHRS4-AS1Q9P1J3 65 aa9.35□□□□□ -0.91
LINC00404-201ENST00000418660 RPS29P62273 56 aaKnown RBP9.34□□□□□ -0.91
LINC00404-201ENST00000418660 HIST3H2BBQ8N257 126 aa9.34□□□□□ -0.91
LINC00404-201ENST00000418660 COX7BP24311 80 aa9.33□□□□□ -0.92
LINC00404-201ENST00000418660 S100A2P29034 98 aa9.33□□□□□ -0.92
LINC00404-201ENST00000418660 ELOF1P60002 83 aaKnown RBP9.33□□□□□ -0.92
LINC00404-201ENST00000418660 C6orf99Q4VX62 202 aa9.33□□□□□ -0.92
LINC00404-201ENST00000418660 C9orf153Q5TBE3 101 aa9.33□□□□□ -0.92
LINC00404-201ENST00000418660 HIST1H2BLQ99880 126 aa9.33□□□□□ -0.92
LINC00404-201ENST00000418660 SPRR1BP22528 89 aa9.32□□□□□ -0.92
LINC00404-201ENST00000418660 MUSTN1Q8IVN3 82 aa9.32□□□□□ -0.92
LINC00404-201ENST00000418660 TRBV7-6A0A0J9YX20 115 aa9.3□□□□□ -0.92
LINC00404-201ENST00000418660 SLC25A34Q6PIV7 304 aa9.3□□□□□ -0.92
LINC00404-201ENST00000418660 Q8N377 158 aa9.3□□□□□ -0.92
LINC00404-201ENST00000418660 A6NDN8 102 aa9.29□□□□□ -0.92
LINC00404-201ENST00000418660 SLC25A20O43772 301 aa9.28□□□□□ -0.92
LINC00404-201ENST00000418660 S100A6P06703 90 aa9.27□□□□□ -0.93
LINC00404-201ENST00000418660 KRTAP13-3Q3SY46 172 aa9.27□□□□□ -0.93
LINC00404-201ENST00000418660 LAMTOR3Q9UHA4 124 aa9.27□□□□□ -0.93
LINC00404-201ENST00000418660 A0A0U1RQV1 116 aa9.26□□□□□ -0.93
LINC00404-201ENST00000418660 A0A1B0GWB2 263 aa9.26□□□□□ -0.93
LINC00404-201ENST00000418660 HSBP1L1C9JCN9 74 aa9.26□□□□□ -0.93
LINC00404-201ENST00000418660 TAL2Q16559 108 aa9.25□□□□□ -0.93
LINC00404-201ENST00000418660 MUC2Q02817 5179 aa9.24□□□□□ -0.93
LINC00404-201ENST00000418660 TRAV13-2A0A0B4J235 113 aa9.24□□□□□ -0.93
LINC00404-201ENST00000418660 TEX49A0A1B0GTD5 131 aa9.23□□□□□ -0.93
LINC00404-201ENST00000418660 DEFB105AQ8NG35 78 aa9.23□□□□□ -0.93
LINC00404-201ENST00000418660 A4D1N5 150 aa9.22□□□□□ -0.93
LINC00404-201ENST00000418660 SMIM11BQ8TCY0 68 aa9.21□□□□□ -0.94
LINC00404-201ENST00000418660 MUC17Q685J3 4493 aa9.21□□□□□ -0.94
LINC00404-201ENST00000418660 Q1RN00 199 aa9.2□□□□□ -0.94
LINC00404-201ENST00000418660 IGLV5-48A0A075B6I7 105 aa9.18□□□□□ -0.94
LINC00404-201ENST00000418660 SCGB1D1O95968 90 aa9.18□□□□□ -0.94
LINC00404-201ENST00000418660 LINC01547P58512 204 aaPredicted RBP9.18□□□□□ -0.94
LINC00404-201ENST00000418660 SMIM29Q86T20 159 aa9.18□□□□□ -0.94
LINC00404-201ENST00000418660 LIMD2Q9BT23 127 aa9.18□□□□□ -0.94
LINC00404-201ENST00000418660 PRO1933Q9H354 126 aa9.18□□□□□ -0.94
LINC00404-201ENST00000418660 NHP2Q9NX24 153 aaKnown RBP9.18□□□□□ -0.94
LINC00404-201ENST00000418660 HRCT1Q6UXD1 115 aa9.17□□□□□ -0.94
LINC00404-201ENST00000418660 CD164Q04900 197 aa9.16□□□□□ -0.94
LINC00404-201ENST00000418660 VAMP3Q15836 100 aa9.15□□□□□ -0.94
LINC00404-201ENST00000418660 ASB16-AS1Q495Z4 193 aa9.15□□□□□ -0.94
LINC00404-201ENST00000418660 H7C2G1 150 aa9.12□□□□□ -0.95
LINC00404-201ENST00000418660 COX8AP10176 69 aa9.12□□□□□ -0.95
LINC00404-201ENST00000418660 SEC61BP60468 96 aaKnown RBP9.12□□□□□ -0.95
LINC00404-201ENST00000418660 LINC00575Q6W349 94 aa9.11□□□□□ -0.95
LINC00404-201ENST00000418660 HIST1H4GQ99525 98 aa9.11□□□□□ -0.95
LINC00404-201ENST00000418660 DLEU1O43261 78 aa9.1□□□□□ -0.95
LINC00404-201ENST00000418660 XP32Q5T750 250 aa9.1□□□□□ -0.95
LINC00404-201ENST00000418660 Q5XG85 94 aa9.08□□□□□ -0.96
LINC00404-201ENST00000418660 hADV29S1A0JD25 119 aa9.07□□□□□ -0.96
LINC00404-201ENST00000418660 A0A0G2JQZ4 141 aa9.06□□□□□ -0.96
LINC00404-201ENST00000418660 LCE2AQ5TA79 106 aaPredicted RBP9.06□□□□□ -0.96
LINC00404-201ENST00000418660 C12orf57Q99622 126 aa9.06□□□□□ -0.96
LINC00404-201ENST00000418660 Q6ZQY7 126 aa9.05□□□□□ -0.96
LINC00404-201ENST00000418660 C14orf144Q96I85 54 aa9.05□□□□□ -0.96
LINC00404-201ENST00000418660 F8WEM9 126 aa9.04□□□□□ -0.96
LINC00404-201ENST00000418660 BVES-AS1Q5T3Y7 98 aa9.04□□□□□ -0.96
LINC00404-201ENST00000418660 SPATA45Q537H7 98 aa9.03□□□□□ -0.96
LINC00404-201ENST00000418660 HIGD1BQ9P298 99 aa9.03□□□□□ -0.96
LINC00404-201ENST00000418660 PAM16Q9Y3D7 125 aa9.03□□□□□ -0.96
LINC00404-201ENST00000418660 C1orf195Q5TG92 126 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms