RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 TRAV12-1A0A0B4J245 112 aa2.99□□□□□ -1.93
VPS41-205ENST00000414632 TMEM238C9JI98 176 aa2.99□□□□□ -1.93
VPS41-205ENST00000414632 CXCL5P42830 114 aa2.99□□□□□ -1.93
VPS41-205ENST00000414632 UBE2BP63146 152 aa2.99□□□□□ -1.93
VPS41-205ENST00000414632 PRR4Q16378 134 aa2.99□□□□□ -1.93
VPS41-205ENST00000414632 Q1RN00 199 aa2.99□□□□□ -1.93
VPS41-205ENST00000414632 C1orf137Q5JT78 98 aa2.99□□□□□ -1.93
VPS41-205ENST00000414632 HIST3H2BBQ8N257 126 aa2.99□□□□□ -1.93
VPS41-205ENST00000414632 TMEM223A0PJW6 202 aa2.98□□□□□ -1.93
VPS41-205ENST00000414632 HSBP1L1C9JCN9 74 aa2.98□□□□□ -1.93
VPS41-205ENST00000414632 TSTD3H0UI37 97 aa2.98□□□□□ -1.93
VPS41-205ENST00000414632 MT3P25713 68 aa2.98□□□□□ -1.93
VPS41-205ENST00000414632 HSPB8Q9UJY1 196 aa2.98□□□□□ -1.93
VPS41-205ENST00000414632 ERG28Q9UKR5 140 aa2.98□□□□□ -1.93
VPS41-205ENST00000414632 C22orf24Q9Y442 160 aa2.98□□□□□ -1.93
VPS41-205ENST00000414632 S100A2P29034 98 aa2.97□□□□□ -1.93
VPS41-205ENST00000414632 TSPEAR-AS2P59090 65 aa2.97□□□□□ -1.93
VPS41-205ENST00000414632 MAP1LC3CQ9BXW4 147 aa2.97□□□□□ -1.93
VPS41-205ENST00000414632 DPM2O94777 84 aa2.96□□□□□ -1.94
VPS41-205ENST00000414632 OXTP01178 125 aa2.96□□□□□ -1.94
VPS41-205ENST00000414632 IGKCP01834 107 aa2.96□□□□□ -1.94
VPS41-205ENST00000414632 SMIM13P0DJ93 91 aa2.96□□□□□ -1.94
VPS41-205ENST00000414632 LINC00158P58513 81 aa2.96□□□□□ -1.94
VPS41-205ENST00000414632 MEIG1Q5JSS6 88 aa2.96□□□□□ -1.94
VPS41-205ENST00000414632 MRPL55Q7Z7F7 128 aaKnown RBP2.96□□□□□ -1.94
VPS41-205ENST00000414632 NKAPP1Q8N9T2 125 aa2.96□□□□□ -1.94
VPS41-205ENST00000414632 Q8NDZ9 215 aa2.96□□□□□ -1.94
VPS41-205ENST00000414632 LINC00167Q96N53 147 aa2.96□□□□□ -1.94
VPS41-205ENST00000414632 HIST1H4GQ99525 98 aa2.96□□□□□ -1.94
VPS41-205ENST00000414632 SND1-IT1Q9HBX3 110 aa2.96□□□□□ -1.94
VPS41-205ENST00000414632 IGKV2-28A0A075B6P5 120 aa2.95□□□□□ -1.94
VPS41-205ENST00000414632 SYS1-DBNDD2H3BUS1 97 aa2.95□□□□□ -1.94
VPS41-205ENST00000414632 M0R143 59 aa2.95□□□□□ -1.94
VPS41-205ENST00000414632 IGKV2D-28P01615 120 aa2.95□□□□□ -1.94
VPS41-205ENST00000414632 IGLV7-43P04211 117 aa2.95□□□□□ -1.94
VPS41-205ENST00000414632 MT1HL1P0DM35 61 aa2.95□□□□□ -1.94
VPS41-205ENST00000414632 PLNP26678 52 aa2.95□□□□□ -1.94
VPS41-205ENST00000414632 KRTDAPP60985 99 aa2.95□□□□□ -1.94
VPS41-205ENST00000414632 JOSD1Q15040 202 aaPredicted RBP2.95□□□□□ -1.94
VPS41-205ENST00000414632 SPINK6Q6UWN8 80 aa2.95□□□□□ -1.94
VPS41-205ENST00000414632 DAND5Q8N907 189 aa2.95□□□□□ -1.94
VPS41-205ENST00000414632 TYMSOSQ8TAI1 123 aa2.95□□□□□ -1.94
VPS41-205ENST00000414632 HIST1H2BLQ99880 126 aa2.95□□□□□ -1.94
VPS41-205ENST00000414632 NDUFA12Q9UI09 145 aa2.95□□□□□ -1.94
VPS41-205ENST00000414632 MYMXA0A1B0GTQ4 84 aa2.94□□□□□ -1.94
VPS41-205ENST00000414632 J3QQQ9 107 aa2.94□□□□□ -1.94
VPS41-205ENST00000414632 NCR3O14931 201 aa2.94□□□□□ -1.94
VPS41-205ENST00000414632 LEPROTO15243 131 aa2.94□□□□□ -1.94
VPS41-205ENST00000414632 TSPAN13O95857 204 aa2.94□□□□□ -1.94
VPS41-205ENST00000414632 C3orf79P0CE67 100 aa2.94□□□□□ -1.94
VPS41-205ENST00000414632 LGALS3P17931 250 aaKnown RBP2.94□□□□□ -1.94
VPS41-205ENST00000414632 HERVK_113P61574 105 aa2.94□□□□□ -1.94
VPS41-205ENST00000414632 NPC2P61916 151 aa2.94□□□□□ -1.94
VPS41-205ENST00000414632 COX17Q14061 63 aa2.94□□□□□ -1.94
VPS41-205ENST00000414632 MIR7-3HGQ8N6C7 128 aa2.94□□□□□ -1.94
VPS41-205ENST00000414632 HMCN2Q8NDA2 5059 aa2.93□□□□□ -1.94
VPS41-205ENST00000414632 COA6Q5JTJ3 125 aaKnown RBP2.93□□□□□ -1.94
VPS41-205ENST00000414632 LINC01545Q5VT33 79 aa2.93□□□□□ -1.94
VPS41-205ENST00000414632 SFTA2Q6UW10 78 aa2.93□□□□□ -1.94
VPS41-205ENST00000414632 Q6ZVH6 145 aa2.93□□□□□ -1.94
VPS41-205ENST00000414632 BOD1L2Q8IYS8 172 aa2.93□□□□□ -1.94
VPS41-205ENST00000414632 ATOH7Q8N100 152 aa2.93□□□□□ -1.94
VPS41-205ENST00000414632 DIRC1Q969H9 104 aa2.93□□□□□ -1.94
VPS41-205ENST00000414632 PLEKHB2Q96CS7 222 aa2.93□□□□□ -1.94
VPS41-205ENST00000414632 LINC01600Q96MT4 127 aa2.93□□□□□ -1.94
VPS41-205ENST00000414632 TTTY13Q9BZ97 58 aa2.93□□□□□ -1.94
VPS41-205ENST00000414632 TP73-AS1Q9UF72 201 aa2.93□□□□□ -1.94
VPS41-205ENST00000414632 IGKV2D-26A0A0A0MRZ7 120 aa2.92□□□□□ -1.94
VPS41-205ENST00000414632 H0Y9J4 135 aa2.92□□□□□ -1.94
VPS41-205ENST00000414632 PRLHP81277 87 aa2.92□□□□□ -1.94
VPS41-205ENST00000414632 IGLV1-50A0A075B6I6 118 aa2.91□□□□□ -1.94
VPS41-205ENST00000414632 A0A0J9YXY3 114 aa2.91□□□□□ -1.94
VPS41-205ENST00000414632 ZNF861PO60384 105 aa2.91□□□□□ -1.94
VPS41-205ENST00000414632 BCE1O60756 84 aa2.91□□□□□ -1.94
VPS41-205ENST00000414632 NMUP48645 174 aa2.91□□□□□ -1.94
VPS41-205ENST00000414632 UBE2AP49459 152 aa2.91□□□□□ -1.94
VPS41-205ENST00000414632 SOSTDC1Q6X4U4 206 aa2.91□□□□□ -1.94
VPS41-205ENST00000414632 FAM19A1Q7Z5A9 133 aa2.91□□□□□ -1.94
VPS41-205ENST00000414632 TMEM126AQ9H061 195 aa2.91□□□□□ -1.94
VPS41-205ENST00000414632 ANAPC11Q9NYG5 84 aa2.91□□□□□ -1.94
VPS41-205ENST00000414632 TRBV10-3A0A0K0K1G6 114 aa2.9□□□□□ -1.95
VPS41-205ENST00000414632 C20orf202A1L168 122 aa2.9□□□□□ -1.95
VPS41-205ENST00000414632 ZNF815PA8K554 130 aa2.9□□□□□ -1.95
VPS41-205ENST00000414632 M0R378 163 aa2.9□□□□□ -1.95
VPS41-205ENST00000414632 KRTAP1-4P0C5Y4 121 aa2.9□□□□□ -1.95
VPS41-205ENST00000414632 RPL28P46779 137 aaKnown RBP2.9□□□□□ -1.95
VPS41-205ENST00000414632 KRTAP10-8P60410 259 aa2.9□□□□□ -1.95
VPS41-205ENST00000414632 BATFQ16520 125 aa2.9□□□□□ -1.95
VPS41-205ENST00000414632 MIEN1Q9BRT3 115 aa2.9□□□□□ -1.95
VPS41-205ENST00000414632 KRTAP13-1Q8IUC0 172 aa2.89□□□□□ -1.95
VPS41-205ENST00000414632 CEND1Q8N111 149 aa2.89□□□□□ -1.95
VPS41-205ENST00000414632 VPS25Q9BRG1 176 aa2.89□□□□□ -1.95
VPS41-205ENST00000414632 HIGD2AQ9BW72 106 aa2.89□□□□□ -1.95
VPS41-205ENST00000414632 OCIAD2Q56VL3 154 aa2.88□□□□□ -1.95
VPS41-205ENST00000414632 S100A7L2Q5SY68 101 aa2.88□□□□□ -1.95
VPS41-205ENST00000414632 SCGB1D4Q6XE38 83 aa2.88□□□□□ -1.95
VPS41-205ENST00000414632 PCP2Q8IVA1 136 aa2.88□□□□□ -1.95
VPS41-205ENST00000414632 LINC00308Q8TCZ7 52 aa2.88□□□□□ -1.95
VPS41-205ENST00000414632 LPAP08519 4548 aa2.88□□□□□ -1.95
VPS41-205ENST00000414632 ETDCA0A1B0GVM5 59 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms