RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 UBE2AP49459 152 aa18.58■□□□□ 0.56
CSNK1E-206ENST00000413574 TRAV23DV6A0A075B6W5 121 aa18.57■□□□□ 0.56
CSNK1E-206ENST00000413574 KRTAP13-1Q8IUC0 172 aa18.57■□□□□ 0.56
CSNK1E-206ENST00000413574 C12orf57Q99622 126 aa18.56■□□□□ 0.56
CSNK1E-206ENST00000413574 A6NDN8 102 aa18.55■□□□□ 0.56
CSNK1E-206ENST00000413574 KRTAP4-16G5E9R7 235 aaPredicted RBP18.55■□□□□ 0.56
CSNK1E-206ENST00000413574 RPL28P46779 137 aaKnown RBP18.55■□□□□ 0.56
CSNK1E-206ENST00000413574 DIRC1Q969H9 104 aa18.52■□□□□ 0.56
CSNK1E-206ENST00000413574 ETDCA0A1B0GVM5 59 aa18.51■□□□□ 0.55
CSNK1E-206ENST00000413574 H0Y9J4 135 aa18.51■□□□□ 0.55
CSNK1E-206ENST00000413574 TAL2Q16559 108 aa18.51■□□□□ 0.55
CSNK1E-206ENST00000413574 ZNF73O43830 326 aaPredicted RBP18.5■□□□□ 0.55
CSNK1E-206ENST00000413574 CEND1Q8N111 149 aa18.5■□□□□ 0.55
CSNK1E-206ENST00000413574 TRAV13-2A0A0B4J235 113 aa18.49■□□□□ 0.55
CSNK1E-206ENST00000413574 B5MCH6 92 aa18.46■□□□□ 0.55
CSNK1E-206ENST00000413574 HSD52Q0P140 79 aa18.45■□□□□ 0.54
CSNK1E-206ENST00000413574 HIGD2AQ9BW72 106 aa18.45■□□□□ 0.54
CSNK1E-206ENST00000413574 CBY1Q9Y3M2 126 aa18.45■□□□□ 0.54
CSNK1E-206ENST00000413574 FXYD2P54710 66 aa18.44■□□□□ 0.54
CSNK1E-206ENST00000413574 CFC1BP0CG36 223 aa18.43■□□□□ 0.54
CSNK1E-206ENST00000413574 CFC1P0CG37 223 aa18.43■□□□□ 0.54
CSNK1E-206ENST00000413574 C6orf99Q4VX62 202 aa18.41■□□□□ 0.54
CSNK1E-206ENST00000413574 Q6ZRX8 168 aa18.4■□□□□ 0.54
CSNK1E-206ENST00000413574 SMIM11BQ8TCY0 68 aa18.4■□□□□ 0.54
CSNK1E-206ENST00000413574 RPL13AP40429 203 aaKnown RBP18.39■□□□□ 0.53
CSNK1E-206ENST00000413574 SMCR5Q8TEV8 140 aa18.38■□□□□ 0.53
CSNK1E-206ENST00000413574 Q9BRP9 147 aa18.38■□□□□ 0.53
CSNK1E-206ENST00000413574 KRTAP1-4P0C5Y4 121 aa18.36■□□□□ 0.53
CSNK1E-206ENST00000413574 HINT1P49773 126 aaPredicted RBP18.35■□□□□ 0.53
CSNK1E-206ENST00000413574 RAB37Q96AX2 223 aa18.35■□□□□ 0.53
CSNK1E-206ENST00000413574 TMEM238LA0A1B0GVL6 79 aa18.34■□□□□ 0.53
CSNK1E-206ENST00000413574 A6NJY4 79 aa18.34■□□□□ 0.53
CSNK1E-206ENST00000413574 A0A0B4J2C4 111 aa18.34■□□□□ 0.53
CSNK1E-206ENST00000413574 KRTAP29-1A8MX34 341 aaPredicted RBP18.34■□□□□ 0.53
CSNK1E-206ENST00000413574 OXTP01178 125 aa18.33■□□□□ 0.52
CSNK1E-206ENST00000413574 TSTD3H0UI37 97 aa18.32■□□□□ 0.52
CSNK1E-206ENST00000413574 H7C2G1 150 aa18.32■□□□□ 0.52
CSNK1E-206ENST00000413574 ERC2-IT1O76042 136 aa18.32■□□□□ 0.52
CSNK1E-206ENST00000413574 COX7BP24311 80 aa18.31■□□□□ 0.52
CSNK1E-206ENST00000413574 LINC01600Q96MT4 127 aa18.31■□□□□ 0.52
CSNK1E-206ENST00000413574 ELOF1P60002 83 aaKnown RBP18.31■□□□□ 0.52
CSNK1E-206ENST00000413574 CTAG1AP78358 180 aa18.3■□□□□ 0.52
CSNK1E-206ENST00000413574 NHP2Q9NX24 153 aaKnown RBP18.3■□□□□ 0.52
CSNK1E-206ENST00000413574 ANAPC11Q9NYG5 84 aa18.3■□□□□ 0.52
CSNK1E-206ENST00000413574 TNXBP22105 4242 aa18.29■□□□□ 0.52
CSNK1E-206ENST00000413574 BVES-AS1Q5T3Y7 98 aa18.27■□□□□ 0.51
CSNK1E-206ENST00000413574 TRBV7-6A0A0J9YX20 115 aa18.26■□□□□ 0.51
CSNK1E-206ENST00000413574 K7ERJ3 54 aa18.25■□□□□ 0.51
CSNK1E-206ENST00000413574 PRO1854Q9UHT4 67 aa18.25■□□□□ 0.51
CSNK1E-206ENST00000413574 A0A1B0GWB2 263 aa18.23■□□□□ 0.51
CSNK1E-206ENST00000413574 MT1HL1P0DM35 61 aa18.23■□□□□ 0.51
CSNK1E-206ENST00000413574 PRR26Q8N8Z3 221 aa18.23■□□□□ 0.51
CSNK1E-206ENST00000413574 J3QL48 77 aa18.23■□□□□ 0.51
CSNK1E-206ENST00000413574 SPRR4Q96PI1 79 aa18.23■□□□□ 0.51
CSNK1E-206ENST00000413574 DHRS4-AS1Q9P1J3 65 aa18.2■□□□□ 0.5
CSNK1E-206ENST00000413574 A0A087X002 238 aa18.18■□□□□ 0.5
CSNK1E-206ENST00000413574 Q1RN00 199 aa18.18■□□□□ 0.5
CSNK1E-206ENST00000413574 ST20-AS1Q8NBB2 130 aa18.18■□□□□ 0.5
CSNK1E-206ENST00000413574 DMBT1Q9UGM3 2413 aaPredicted RBP18.17■□□□□ 0.5
CSNK1E-206ENST00000413574 KRTAP10-8P60410 259 aa18.16■□□□□ 0.5
CSNK1E-206ENST00000413574 VAMP3Q15836 100 aa18.16■□□□□ 0.5
CSNK1E-206ENST00000413574 ZNF706Q9Y5V0 76 aaPredicted RBP18.16■□□□□ 0.5
CSNK1E-206ENST00000413574 GAGE2AQ6NT46 116 aa18.14■□□□□ 0.49
CSNK1E-206ENST00000413574 M0R143 59 aa18.12■□□□□ 0.49
CSNK1E-206ENST00000413574 CRYGAP11844 174 aa18.11■□□□□ 0.49
CSNK1E-206ENST00000413574 FAM229BQ4G0N7 80 aa18.09■□□□□ 0.49
CSNK1E-206ENST00000413574 LINC00575Q6W349 94 aa18.09■□□□□ 0.49
CSNK1E-206ENST00000413574 KRTAP13-2Q52LG2 175 aa18.09■□□□□ 0.49
CSNK1E-206ENST00000413574 HERC1Q15751 4861 aa18.08■□□□□ 0.48
CSNK1E-206ENST00000413574 TSPAN13O95857 204 aa18.07■□□□□ 0.48
CSNK1E-206ENST00000413574 LINC00483Q53H64 154 aa18.07■□□□□ 0.48
CSNK1E-206ENST00000413574 TRIAP1O43715 76 aa18.05■□□□□ 0.48
CSNK1E-206ENST00000413574 SLC25A20O43772 301 aa18.04■□□□□ 0.48
CSNK1E-206ENST00000413574 C3orf22Q8N5N4 141 aa18.03■□□□□ 0.48
CSNK1E-206ENST00000413574 DEFB105AQ8NG35 78 aa18.03■□□□□ 0.48
CSNK1E-206ENST00000413574 BATFQ16520 125 aa18.02■□□□□ 0.48
CSNK1E-206ENST00000413574 hADV29S1A0JD25 119 aa18.01■□□□□ 0.47
CSNK1E-206ENST00000413574 PSMB2P49721 201 aa18■□□□□ 0.47
CSNK1E-206ENST00000413574 TYMSOSQ8TAI1 123 aa18■□□□□ 0.47
CSNK1E-206ENST00000413574 FAM218AQ96MZ4 157 aa18■□□□□ 0.47
CSNK1E-206ENST00000413574 H0YGX0 51 aa17.99■□□□□ 0.47
CSNK1E-206ENST00000413574 LINC01547P58512 204 aaPredicted RBP17.97■□□□□ 0.47
CSNK1E-206ENST00000413574 SPRR1BP22528 89 aa17.95■□□□□ 0.46
CSNK1E-206ENST00000413574 Q6ZQY7 126 aa17.94■□□□□ 0.46
CSNK1E-206ENST00000413574 IGLV9-49A0A0B4J1Y8 123 aa17.94■□□□□ 0.46
CSNK1E-206ENST00000413574 CLEC2BQ92478 149 aa17.93■□□□□ 0.46
CSNK1E-206ENST00000413574 IGLV5-48A0A075B6I7 105 aa17.92■□□□□ 0.46
CSNK1E-206ENST00000413574 TEX49A0A1B0GTD5 131 aa17.92■□□□□ 0.46
CSNK1E-206ENST00000413574 Q8N377 158 aa17.9■□□□□ 0.46
CSNK1E-206ENST00000413574 NAA38Q9BRA0 125 aaKnown RBP17.9■□□□□ 0.46
CSNK1E-206ENST00000413574 COX6CP09669 75 aa17.88■□□□□ 0.45
CSNK1E-206ENST00000413574 MOBPQ13875 183 aa17.88■□□□□ 0.45
CSNK1E-206ENST00000413574 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP17.87■□□□□ 0.45
CSNK1E-206ENST00000413574 SMIM29Q86T20 159 aa17.85■□□□□ 0.45
CSNK1E-206ENST00000413574 PCP4L1A6NKN8 68 aa17.84■□□□□ 0.45
CSNK1E-206ENST00000413574 SCGB1C2P0DMR2 95 aa17.83■□□□□ 0.45
CSNK1E-206ENST00000413574 C9orf153Q5TBE3 101 aa17.83■□□□□ 0.45
CSNK1E-206ENST00000413574 LAMTOR3Q9UHA4 124 aa17.83■□□□□ 0.45
CSNK1E-206ENST00000413574 SNCGO76070 127 aa17.83■□□□□ 0.44
CSNK1E-206ENST00000413574 SNHG12Q9BXW3 62 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms