RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 CFC1P0CG37 223 aa6.06□□□□□ -1.44
PKP4-203ENST00000411900 LINC00158P58513 81 aa6.06□□□□□ -1.44
PKP4-203ENST00000411900 BATFQ16520 125 aa6.06□□□□□ -1.44
PKP4-203ENST00000411900 COL5A1-AS1Q5SY13 56 aa6.06□□□□□ -1.44
PKP4-203ENST00000411900 A6NDN8 102 aa6.05□□□□□ -1.44
PKP4-203ENST00000411900 TAX1BP3O14907 124 aa6.05□□□□□ -1.44
PKP4-203ENST00000411900 PFN2P35080 140 aa6.05□□□□□ -1.44
PKP4-203ENST00000411900 RPL24P83731 157 aaKnown RBP6.05□□□□□ -1.44
PKP4-203ENST00000411900 A0A0B4J2C4 111 aa6.04□□□□□ -1.44
PKP4-203ENST00000411900 TMEM238LA0A1B0GVL6 79 aa6.04□□□□□ -1.44
PKP4-203ENST00000411900 GAGE10A6NGK3 116 aa6.04□□□□□ -1.44
PKP4-203ENST00000411900 A6NJY4 79 aa6.04□□□□□ -1.44
PKP4-203ENST00000411900 RPL37AP8A6NKH3 93 aa6.04□□□□□ -1.44
PKP4-203ENST00000411900 KRTAP1-4P0C5Y4 121 aa6.04□□□□□ -1.44
PKP4-203ENST00000411900 MRPL55Q7Z7F7 128 aaKnown RBP6.04□□□□□ -1.44
PKP4-203ENST00000411900 NHP2Q9NX24 153 aaKnown RBP6.04□□□□□ -1.44
PKP4-203ENST00000411900 LPAP08519 4548 aa6.04□□□□□ -1.44
PKP4-203ENST00000411900 NPC2P61916 151 aa6.03□□□□□ -1.44
PKP4-203ENST00000411900 COPS9Q8WXC6 57 aa6.03□□□□□ -1.44
PKP4-203ENST00000411900 SND1-IT1Q9HBX3 110 aa6.03□□□□□ -1.44
PKP4-203ENST00000411900 RNF213Q63HN8 5207 aa6.03□□□□□ -1.44
PKP4-203ENST00000411900 K7ERJ3 54 aa6.02□□□□□ -1.45
PKP4-203ENST00000411900 ZNF861PO60384 105 aa6.02□□□□□ -1.45
PKP4-203ENST00000411900 LINC00167Q96N53 147 aa6.02□□□□□ -1.45
PKP4-203ENST00000411900 IGLV1-50A0A075B6I6 118 aa6.01□□□□□ -1.45
PKP4-203ENST00000411900 IGKV2-28A0A075B6P5 120 aa6.01□□□□□ -1.45
PKP4-203ENST00000411900 NDUFC2O95298 119 aa6.01□□□□□ -1.45
PKP4-203ENST00000411900 IGKV2D-28P01615 120 aa6.01□□□□□ -1.45
PKP4-203ENST00000411900 Q8NDZ9 215 aa6.01□□□□□ -1.45
PKP4-203ENST00000411900 C9orf118A6NHY6 69 aa6□□□□□ -1.45
PKP4-203ENST00000411900 NKAPP1Q8N9T2 125 aa6□□□□□ -1.45
PKP4-203ENST00000411900 PRO1854Q9UHT4 67 aa6□□□□□ -1.45
PKP4-203ENST00000411900 BCE1O60756 84 aa5.99□□□□□ -1.45
PKP4-203ENST00000411900 TSPAN13O95857 204 aa5.98□□□□□ -1.45
PKP4-203ENST00000411900 RPL28P46779 137 aaKnown RBP5.98□□□□□ -1.45
PKP4-203ENST00000411900 LINC00337Q8N6G1 96 aa5.98□□□□□ -1.45
PKP4-203ENST00000411900 RAB37Q96AX2 223 aa5.98□□□□□ -1.45
PKP4-203ENST00000411900 IGLV5-37A0A075B6J1 123 aa5.97□□□□□ -1.45
PKP4-203ENST00000411900 A0A1B0GV90 55 aa5.97□□□□□ -1.45
PKP4-203ENST00000411900 RPL13AP40429 203 aaKnown RBP5.97□□□□□ -1.45
PKP4-203ENST00000411900 UBE2AP49459 152 aa5.97□□□□□ -1.45
PKP4-203ENST00000411900 ANAPC11Q9NYG5 84 aa5.97□□□□□ -1.45
PKP4-203ENST00000411900 A0A087X002 238 aa5.96□□□□□ -1.46
PKP4-203ENST00000411900 TRAV13-2A0A0B4J235 113 aa5.96□□□□□ -1.46
PKP4-203ENST00000411900 LCE2BO14633 110 aa5.96□□□□□ -1.46
PKP4-203ENST00000411900 VPREB1P12018 145 aa5.96□□□□□ -1.46
PKP4-203ENST00000411900 PRR4Q16378 134 aa5.96□□□□□ -1.46
PKP4-203ENST00000411900 TRBV10-2A0A0K0K1G8 114 aa5.95□□□□□ -1.46
PKP4-203ENST00000411900 H3BUT2 72 aa5.95□□□□□ -1.46
PKP4-203ENST00000411900 NAA38Q9BRA0 125 aaKnown RBP5.95□□□□□ -1.46
PKP4-203ENST00000411900 A0A1W2PPM0 123 aa5.94□□□□□ -1.46
PKP4-203ENST00000411900 PRLHP81277 87 aa5.94□□□□□ -1.46
PKP4-203ENST00000411900 IGLV6-57P01721 117 aa5.93□□□□□ -1.46
PKP4-203ENST00000411900 FAM19A1Q7Z5A9 133 aa5.93□□□□□ -1.46
PKP4-203ENST00000411900 KRTAP13-1Q8IUC0 172 aa5.93□□□□□ -1.46
PKP4-203ENST00000411900 TYMSOSQ8TAI1 123 aa5.93□□□□□ -1.46
PKP4-203ENST00000411900 CRYGAP11844 174 aa5.92□□□□□ -1.46
PKP4-203ENST00000411900 TMEM126AQ9H061 195 aa5.92□□□□□ -1.46
PKP4-203ENST00000411900 M0R378 163 aa5.91□□□□□ -1.46
PKP4-203ENST00000411900 NCR3O14931 201 aa5.91□□□□□ -1.46
PKP4-203ENST00000411900 TRIAP1O43715 76 aa5.91□□□□□ -1.46
PKP4-203ENST00000411900 KRTAP13-2Q52LG2 175 aa5.91□□□□□ -1.46
PKP4-203ENST00000411900 SMIM11BQ8TCY0 68 aa5.91□□□□□ -1.46
PKP4-203ENST00000411900 H7C2G1 150 aa5.9□□□□□ -1.46
PKP4-203ENST00000411900 FABP2P12104 132 aa5.9□□□□□ -1.46
PKP4-203ENST00000411900 SMCPP49901 116 aaPredicted RBP5.9□□□□□ -1.46
PKP4-203ENST00000411900 TRBV10-3A0A0K0K1G6 114 aa5.89□□□□□ -1.47
PKP4-203ENST00000411900 K7EP34 96 aa5.89□□□□□ -1.47
PKP4-203ENST00000411900 VAMP3Q15836 100 aa5.88□□□□□ -1.47
PKP4-203ENST00000411900 Q1RN00 199 aa5.88□□□□□ -1.47
PKP4-203ENST00000411900 OR13C6PQ8NH95 151 aa5.88□□□□□ -1.47
PKP4-203ENST00000411900 HIGD2AQ9BW72 106 aa5.88□□□□□ -1.47
PKP4-203ENST00000411900 SPCS1Q9Y6A9 102 aa5.88□□□□□ -1.47
PKP4-203ENST00000411900 TCL1BO95988 128 aa5.87□□□□□ -1.47
PKP4-203ENST00000411900 UBE2V1Q13404 147 aa5.87□□□□□ -1.47
PKP4-203ENST00000411900 LYRM7Q5U5X0 104 aa5.87□□□□□ -1.47
PKP4-203ENST00000411900 RETNLBQ9BQ08 111 aa5.87□□□□□ -1.47
PKP4-203ENST00000411900 TRBV20-1A0A075B6N2 111 aa5.86□□□□□ -1.47
PKP4-203ENST00000411900 PSMB2P49721 201 aa5.86□□□□□ -1.47
PKP4-203ENST00000411900 FAM229BQ4G0N7 80 aa5.86□□□□□ -1.47
PKP4-203ENST00000411900 S100A7L2Q5SY68 101 aa5.86□□□□□ -1.47
PKP4-203ENST00000411900 KCNQ1DNQ9H478 68 aa5.86□□□□□ -1.47
PKP4-203ENST00000411900 TRAV23DV6A0A075B6W5 121 aa5.85□□□□□ -1.47
PKP4-203ENST00000411900 KRTAP4-16G5E9R7 235 aaPredicted RBP5.85□□□□□ -1.47
PKP4-203ENST00000411900 H0YGX0 51 aa5.85□□□□□ -1.47
PKP4-203ENST00000411900 LST1O00453 97 aa5.85□□□□□ -1.47
PKP4-203ENST00000411900 COX6CP09669 75 aa5.85□□□□□ -1.47
PKP4-203ENST00000411900 SCGB1C2P0DMR2 95 aa5.85□□□□□ -1.47
PKP4-203ENST00000411900 SPRR1AP35321 89 aa5.85□□□□□ -1.47
PKP4-203ENST00000411900 GTF2H5Q6ZYL4 71 aa5.85□□□□□ -1.47
PKP4-203ENST00000411900 C3orf22Q8N5N4 141 aa5.85□□□□□ -1.47
PKP4-203ENST00000411900 LINC00304Q8N9R0 145 aa5.85□□□□□ -1.47
PKP4-203ENST00000411900 TRBV7-6A0A0J9YX20 115 aa5.84□□□□□ -1.47
PKP4-203ENST00000411900 C6orf99Q4VX62 202 aa5.84□□□□□ -1.47
PKP4-203ENST00000411900 CLEC2BQ92478 149 aa5.84□□□□□ -1.47
PKP4-203ENST00000411900 FAM218AQ96MZ4 157 aa5.84□□□□□ -1.47
PKP4-203ENST00000411900 PRO0461Q9UI25 63 aa5.84□□□□□ -1.47
PKP4-203ENST00000411900 H3BMG7 143 aa5.83□□□□□ -1.48
PKP4-203ENST00000411900 PRYO14603 147 aa5.83□□□□□ -1.48
PKP4-203ENST00000411900 ZNF73O43830 326 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms