RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 PCP4P48539 62 aa12.4□□□□□ -0.42
LMO2-203ENST00000411482 SDIM1Q6ZPB5 146 aa12.4□□□□□ -0.42
LMO2-203ENST00000411482 NKAPP1Q8N9T2 125 aa12.4□□□□□ -0.42
LMO2-203ENST00000411482 KRTAP7-1Q8IUC3 87 aa12.39□□□□□ -0.43
LMO2-203ENST00000411482 LINC00528Q8N1L1 170 aa12.39□□□□□ -0.43
LMO2-203ENST00000411482 JMJD7-PLA2G4BH0Y9G9 81 aa12.38□□□□□ -0.43
LMO2-203ENST00000411482 MT-ATP8P03928 68 aa12.38□□□□□ -0.43
LMO2-203ENST00000411482 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.38□□□□□ -0.43
LMO2-203ENST00000411482 PSCAO43653 123 aa12.37□□□□□ -0.43
LMO2-203ENST00000411482 Q6ZR54 194 aa12.37□□□□□ -0.43
LMO2-203ENST00000411482 Q6ZRN7 208 aaPredicted RBP12.36□□□□□ -0.43
LMO2-203ENST00000411482 LRCOL1A6NCL2 159 aa12.35□□□□□ -0.43
LMO2-203ENST00000411482 M0R2N4 97 aa12.35□□□□□ -0.43
LMO2-203ENST00000411482 GAGE2BQ13066 116 aa12.35□□□□□ -0.43
LMO2-203ENST00000411482 IGLV1-50A0A075B6I6 118 aa12.34□□□□□ -0.43
LMO2-203ENST00000411482 FAM168BA1KXE4 195 aa12.33□□□□□ -0.44
LMO2-203ENST00000411482 C16orf90A8MZG2 172 aa12.33□□□□□ -0.44
LMO2-203ENST00000411482 GHRHP01286 108 aa12.33□□□□□ -0.44
LMO2-203ENST00000411482 SPRR1AP35321 89 aa12.33□□□□□ -0.44
LMO2-203ENST00000411482 Q6ZQY7 126 aa12.33□□□□□ -0.44
LMO2-203ENST00000411482 C14orf132Q9NPU4 83 aa12.33□□□□□ -0.44
LMO2-203ENST00000411482 KRTAP4-16G5E9R7 235 aaPredicted RBP12.32□□□□□ -0.44
LMO2-203ENST00000411482 PRYO14603 147 aa12.32□□□□□ -0.44
LMO2-203ENST00000411482 DNAH2Q9P225 4427 aa12.32□□□□□ -0.44
LMO2-203ENST00000411482 DNAH10Q8IVF4 4471 aa12.32□□□□□ -0.44
LMO2-203ENST00000411482 FRAS1Q86XX4 4008 aa12.3□□□□□ -0.44
LMO2-203ENST00000411482 GAGE2AQ6NT46 116 aa12.29□□□□□ -0.44
LMO2-203ENST00000411482 MRPL55Q7Z7F7 128 aaKnown RBP12.29□□□□□ -0.44
LMO2-203ENST00000411482 CCKP06307 115 aa12.28□□□□□ -0.44
LMO2-203ENST00000411482 A0A096LNI7 61 aa12.27□□□□□ -0.44
LMO2-203ENST00000411482 Q6Q795 121 aa12.27□□□□□ -0.44
LMO2-203ENST00000411482 C9orf163Q8N9P6 203 aa12.27□□□□□ -0.44
LMO2-203ENST00000411482 PKIGQ9Y2B9 76 aa12.27□□□□□ -0.45
LMO2-203ENST00000411482 LOC110117498A0A087WWA1 95 aa12.26□□□□□ -0.45
LMO2-203ENST00000411482 RTL8CO15255 209 aa12.26□□□□□ -0.45
LMO2-203ENST00000411482 LINC00643Q86TS7 51 aa12.26□□□□□ -0.45
LMO2-203ENST00000411482 SMCR5Q8TEV8 140 aa12.26□□□□□ -0.45
LMO2-203ENST00000411482 B5MCH6 92 aa12.25□□□□□ -0.45
LMO2-203ENST00000411482 DNAH17Q9UFH2 4485 aa12.24□□□□□ -0.45
LMO2-203ENST00000411482 RBM3P98179 157 aaKnown RBP12.24□□□□□ -0.45
LMO2-203ENST00000411482 Q6ZRX8 168 aa12.24□□□□□ -0.45
LMO2-203ENST00000411482 FAM19A5Q7Z5A7 132 aaPredicted RBP12.24□□□□□ -0.45
LMO2-203ENST00000411482 DHRS4-AS1Q9P1J3 65 aa12.24□□□□□ -0.45
LMO2-203ENST00000411482 RPL37AP8A6NKH3 93 aa12.23□□□□□ -0.45
LMO2-203ENST00000411482 FAT2Q9NYQ8 4349 aa12.23□□□□□ -0.45
LMO2-203ENST00000411482 TRBV7-7A0A0K0K1E9 115 aa12.22□□□□□ -0.45
LMO2-203ENST00000411482 PDE6GP18545 87 aa12.21□□□□□ -0.45
LMO2-203ENST00000411482 C1orf134Q5TEV5 83 aa12.21□□□□□ -0.45
LMO2-203ENST00000411482 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.21□□□□□ -0.46
LMO2-203ENST00000411482 A0A1W2PNN7 141 aa12.21□□□□□ -0.46
LMO2-203ENST00000411482 Q6ZQT0 140 aa12.21□□□□□ -0.46
LMO2-203ENST00000411482 LAMTOR3Q9UHA4 124 aa12.21□□□□□ -0.46
LMO2-203ENST00000411482 IMUPQ9GZP8 106 aa12.2□□□□□ -0.46
LMO2-203ENST00000411482 LINC00846Q9NV44 126 aa12.19□□□□□ -0.46
LMO2-203ENST00000411482 ETDCA0A1B0GVM5 59 aa12.18□□□□□ -0.46
LMO2-203ENST00000411482 Q9BRP9 147 aa12.18□□□□□ -0.46
LMO2-203ENST00000411482 NDUFV3P56181 108 aaKnown RBP12.17□□□□□ -0.46
LMO2-203ENST00000411482 REG3GQ6UW15 175 aa12.17□□□□□ -0.46
LMO2-203ENST00000411482 IGKV2-24A0A0C4DH68 120 aa12.16□□□□□ -0.46
LMO2-203ENST00000411482 TRBV7-4A0A0J9YYF1 115 aa12.16□□□□□ -0.46
LMO2-203ENST00000411482 C21orf62-AS1Q17RA5 79 aa12.16□□□□□ -0.46
LMO2-203ENST00000411482 LINC00474Q9P2X8 69 aa12.16□□□□□ -0.46
LMO2-203ENST00000411482 LINC01547P58512 204 aaPredicted RBP12.16□□□□□ -0.46
LMO2-203ENST00000411482 A0A087WTM6 91 aa12.15□□□□□ -0.46
LMO2-203ENST00000411482 A0A1B0GV72 72 aa12.15□□□□□ -0.46
LMO2-203ENST00000411482 EPM2AB3EWF7 344 aa12.15□□□□□ -0.46
LMO2-203ENST00000411482 DSCR8Q96T75 97 aa12.15□□□□□ -0.46
LMO2-203ENST00000411482 LINC00336Q6ZUF6 198 aa12.14□□□□□ -0.47
LMO2-203ENST00000411482 IGLV5-48A0A075B6I7 105 aa12.13□□□□□ -0.47
LMO2-203ENST00000411482 Q8N377 158 aa12.13□□□□□ -0.47
LMO2-203ENST00000411482 EPPK1P58107 5090 aaKnown RBP12.13□□□□□ -0.47
LMO2-203ENST00000411482 Q6JHZ5 121 aa12.12□□□□□ -0.47
LMO2-203ENST00000411482 PKD1P98161 4303 aa12.12□□□□□ -0.47
LMO2-203ENST00000411482 A0A1B0GVY2 172 aa12.11□□□□□ -0.47
LMO2-203ENST00000411482 TNP2Q05952 138 aa12.11□□□□□ -0.47
LMO2-203ENST00000411482 CHTF8P0CG12 524 aa12.11□□□□□ -0.47
LMO2-203ENST00000411482 HECTD4Q9Y4D8 3996 aa12.07□□□□□ -0.48
LMO2-203ENST00000411482 DNAH11Q96DT5 4516 aa12.07□□□□□ -0.48
LMO2-203ENST00000411482 H0Y9J4 135 aa12.06□□□□□ -0.48
LMO2-203ENST00000411482 ERC2-IT1O76042 136 aa12.06□□□□□ -0.48
LMO2-203ENST00000411482 PHF5AQ7RTV0 110 aaKnown RBP12.05□□□□□ -0.48
LMO2-203ENST00000411482 SPACA4Q8TDM5 124 aa12.05□□□□□ -0.48
LMO2-203ENST00000411482 PANO1I0J062 215 aa12.04□□□□□ -0.48
LMO2-203ENST00000411482 UBE2BP63146 152 aa12.04□□□□□ -0.48
LMO2-203ENST00000411482 ATP5EP2Q5VTU8 51 aa12.04□□□□□ -0.48
LMO2-203ENST00000411482 KRTAP11-1Q8IUC1 163 aa12.04□□□□□ -0.48
LMO2-203ENST00000411482 PKHD1P08F94 4074 aa12.03□□□□□ -0.48
LMO2-203ENST00000411482 ST20-AS1Q8NBB2 130 aa12.03□□□□□ -0.48
LMO2-203ENST00000411482 UBL5Q9BZL1 73 aa12.03□□□□□ -0.48
LMO2-203ENST00000411482 DEFB105AQ8NG35 78 aa12.02□□□□□ -0.48
LMO2-203ENST00000411482 FAM19A1Q7Z5A9 133 aa12.01□□□□□ -0.49
LMO2-203ENST00000411482 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12□□□□□ -0.49
LMO2-203ENST00000411482 A0A1B0GW54 56 aa11.98□□□□□ -0.49
LMO2-203ENST00000411482 SMIM29Q86T20 159 aa11.97□□□□□ -0.49
LMO2-203ENST00000411482 IGKV3D-7A0A0C4DH55 119 aa11.96□□□□□ -0.5
LMO2-203ENST00000411482 KRTAP10-2P60368 255 aa11.96□□□□□ -0.5
LMO2-203ENST00000411482 PRLHP81277 87 aa11.96□□□□□ -0.5
LMO2-203ENST00000411482 Q6ZVQ6 151 aa11.96□□□□□ -0.5
LMO2-203ENST00000411482 HIST1H4AP62805 103 aaKnown RBP11.95□□□□□ -0.5
LMO2-203ENST00000411482 KRTAP13-1Q8IUC0 172 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms