RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 ARL17AQ8IVW1 177 aa8.76□□□□□ -1.01
CHMP3-203ENST00000409225 SEC11CQ9BY50 192 aa8.76□□□□□ -1.01
CHMP3-203ENST00000409225 ZNF73O43830 326 aaPredicted RBP8.75□□□□□ -1.01
CHMP3-203ENST00000409225 SLC25A34Q6PIV7 304 aa8.75□□□□□ -1.01
CHMP3-203ENST00000409225 C18orf32Q8TCD1 76 aa8.75□□□□□ -1.01
CHMP3-203ENST00000409225 C5orf52A6NGY3 159 aa8.74□□□□□ -1.01
CHMP3-203ENST00000409225 SPRR1BP22528 89 aa8.74□□□□□ -1.01
CHMP3-203ENST00000409225 LAMTOR3Q9UHA4 124 aa8.73□□□□□ -1.01
CHMP3-203ENST00000409225 TRAV12-1A0A0B4J245 112 aa8.72□□□□□ -1.01
CHMP3-203ENST00000409225 C1orf195Q5TG92 126 aa8.72□□□□□ -1.01
CHMP3-203ENST00000409225 MIEN1Q9BRT3 115 aa8.72□□□□□ -1.01
CHMP3-203ENST00000409225 CD164Q04900 197 aa8.71□□□□□ -1.02
CHMP3-203ENST00000409225 KRTAP9-8Q9BYQ0 159 aa8.71□□□□□ -1.02
CHMP3-203ENST00000409225 NDUFC2O95298 119 aa8.7□□□□□ -1.02
CHMP3-203ENST00000409225 TSPEAR-AS2P59090 65 aa8.7□□□□□ -1.02
CHMP3-203ENST00000409225 RPS10P5Q9NQ39 176 aa8.7□□□□□ -1.02
CHMP3-203ENST00000409225 HINT1P49773 126 aaPredicted RBP8.69□□□□□ -1.02
CHMP3-203ENST00000409225 Q1RN00 199 aa8.68□□□□□ -1.02
CHMP3-203ENST00000409225 COMMD7Q86VX2 200 aa8.68□□□□□ -1.02
CHMP3-203ENST00000409225 IFI27L1Q96BM0 104 aa8.68□□□□□ -1.02
CHMP3-203ENST00000409225 PRO1933Q9H354 126 aa8.68□□□□□ -1.02
CHMP3-203ENST00000409225 NPC2P61916 151 aa8.67□□□□□ -1.02
CHMP3-203ENST00000409225 KRTAP19-1Q8IUB9 90 aa8.67□□□□□ -1.02
CHMP3-203ENST00000409225 TRAPPC1Q9Y5R8 145 aa8.67□□□□□ -1.02
CHMP3-203ENST00000409225 SYNE2Q8WXH0 6885 aaKnown RBP8.66□□□□□ -1.02
CHMP3-203ENST00000409225 Q5XG85 94 aa8.66□□□□□ -1.02
CHMP3-203ENST00000409225 DHRS4-AS1Q9P1J3 65 aa8.65□□□□□ -1.02
CHMP3-203ENST00000409225 LEPROTO15243 131 aa8.64□□□□□ -1.03
CHMP3-203ENST00000409225 SOSTDC1Q6X4U4 206 aa8.64□□□□□ -1.03
CHMP3-203ENST00000409225 SMIM29Q86T20 159 aa8.64□□□□□ -1.03
CHMP3-203ENST00000409225 DEFB105AQ8NG35 78 aa8.64□□□□□ -1.03
CHMP3-203ENST00000409225 TMEM218A2RU14 115 aa8.63□□□□□ -1.03
CHMP3-203ENST00000409225 MACF1Q9UPN3 7388 aaKnown RBP8.63□□□□□ -1.03
CHMP3-203ENST00000409225 A0A0G2JQZ4 141 aa8.62□□□□□ -1.03
CHMP3-203ENST00000409225 IFITM2Q01629 132 aa8.62□□□□□ -1.03
CHMP3-203ENST00000409225 TAL2Q16559 108 aa8.62□□□□□ -1.03
CHMP3-203ENST00000409225 CBY1Q9Y3M2 126 aa8.62□□□□□ -1.03
CHMP3-203ENST00000409225 H0Y8G0 127 aa8.61□□□□□ -1.03
CHMP3-203ENST00000409225 AKR1D1P51857 326 aa8.61□□□□□ -1.03
CHMP3-203ENST00000409225 J3QQQ9 107 aa8.6□□□□□ -1.03
CHMP3-203ENST00000409225 RHEBQ15382 184 aa8.59□□□□□ -1.03
CHMP3-203ENST00000409225 OR13C6PQ8NH95 151 aa8.59□□□□□ -1.03
CHMP3-203ENST00000409225 ATP11AUNQ6ZP68 121 aa8.58□□□□□ -1.04
CHMP3-203ENST00000409225 TEX49A0A1B0GTD5 131 aa8.57□□□□□ -1.04
CHMP3-203ENST00000409225 LGALS3P17931 250 aaKnown RBP8.57□□□□□ -1.04
CHMP3-203ENST00000409225 NMUP48645 174 aa8.57□□□□□ -1.04
CHMP3-203ENST00000409225 ADAMTSL4-AS1Q5T5F5 129 aa8.57□□□□□ -1.04
CHMP3-203ENST00000409225 UQCC3Q6UW78 93 aa8.57□□□□□ -1.04
CHMP3-203ENST00000409225 CHCHD1Q96BP2 118 aaKnown RBP8.57□□□□□ -1.04
CHMP3-203ENST00000409225 COX7BP24311 80 aa8.56□□□□□ -1.04
CHMP3-203ENST00000409225 ELOF1P60002 83 aaKnown RBP8.55□□□□□ -1.04
CHMP3-203ENST00000409225 CLLU1Q5K131 121 aa8.55□□□□□ -1.04
CHMP3-203ENST00000409225 C20orf202A1L168 122 aa8.54□□□□□ -1.04
CHMP3-203ENST00000409225 TCL1BO95988 128 aa8.54□□□□□ -1.04
CHMP3-203ENST00000409225 MT2AP02795 61 aa8.54□□□□□ -1.04
CHMP3-203ENST00000409225 HERVK_113P61574 105 aa8.53□□□□□ -1.04
CHMP3-203ENST00000409225 A0A0J9YXY3 114 aa8.52□□□□□ -1.05
CHMP3-203ENST00000409225 PCP2Q8IVA1 136 aa8.52□□□□□ -1.05
CHMP3-203ENST00000409225 PLNP26678 52 aa8.51□□□□□ -1.05
CHMP3-203ENST00000409225 C6orf99Q4VX62 202 aa8.51□□□□□ -1.05
CHMP3-203ENST00000409225 Q75L30 129 aa8.51□□□□□ -1.05
CHMP3-203ENST00000409225 OBSCN-AS1Q96MR7 158 aa8.51□□□□□ -1.05
CHMP3-203ENST00000409225 SPANXCQ9NY87 97 aa8.51□□□□□ -1.05
CHMP3-203ENST00000409225 PMCHL2Q9BQD1 86 aa8.49□□□□□ -1.05
CHMP3-203ENST00000409225 SPANXDQ9BXN6 97 aa8.49□□□□□ -1.05
CHMP3-203ENST00000409225 HSBP1O75506 76 aa8.48□□□□□ -1.05
CHMP3-203ENST00000409225 MT1FP04733 61 aa8.48□□□□□ -1.05
CHMP3-203ENST00000409225 LINC00308Q8TCZ7 52 aa8.48□□□□□ -1.05
CHMP3-203ENST00000409225 DPM2O94777 84 aa8.47□□□□□ -1.05
CHMP3-203ENST00000409225 C10orf91Q5T1B1 145 aa8.47□□□□□ -1.05
CHMP3-203ENST00000409225 KRTAP9-3Q9BYQ3 159 aa8.46□□□□□ -1.06
CHMP3-203ENST00000409225 IGLV5-48A0A075B6I7 105 aa8.45□□□□□ -1.06
CHMP3-203ENST00000409225 IGKCP01834 107 aa8.45□□□□□ -1.06
CHMP3-203ENST00000409225 TRBV20-1A0A075B6N2 111 aa8.44□□□□□ -1.06
CHMP3-203ENST00000409225 LEPROTL1O95214 131 aa8.44□□□□□ -1.06
CHMP3-203ENST00000409225 KRTAP10-10P60014 251 aa8.43□□□□□ -1.06
CHMP3-203ENST00000409225 LITAFQ99732 161 aa8.43□□□□□ -1.06
CHMP3-203ENST00000409225 TRBV7-6A0A0J9YX20 115 aa8.4□□□□□ -1.06
CHMP3-203ENST00000409225 LINC00846Q9NV44 126 aa8.4□□□□□ -1.06
CHMP3-203ENST00000409225 A0A1B0GWB2 263 aa8.39□□□□□ -1.07
CHMP3-203ENST00000409225 LINC00518Q8N0U6 118 aa8.39□□□□□ -1.07
CHMP3-203ENST00000409225 Q96NJ1 140 aa8.39□□□□□ -1.07
CHMP3-203ENST00000409225 E9PLD3 99 aa8.38□□□□□ -1.07
CHMP3-203ENST00000409225 FABP4P15090 132 aa8.37□□□□□ -1.07
CHMP3-203ENST00000409225 FAM236DA0A1B0GTK5 79 aa8.36□□□□□ -1.07
CHMP3-203ENST00000409225 F8WEM9 126 aa8.36□□□□□ -1.07
CHMP3-203ENST00000409225 TIMM17BO60830 172 aa8.36□□□□□ -1.07
CHMP3-203ENST00000409225 FAM236CP0DP71 79 aa8.36□□□□□ -1.07
CHMP3-203ENST00000409225 HSPB8Q9UJY1 196 aa8.36□□□□□ -1.07
CHMP3-203ENST00000409225 TRBV7-7A0A0K0K1E9 115 aa8.35□□□□□ -1.07
CHMP3-203ENST00000409225 SERF1AO75920 110 aa8.34□□□□□ -1.07
CHMP3-203ENST00000409225 LINC00310P59036 64 aa8.34□□□□□ -1.07
CHMP3-203ENST00000409225 KRTAP19-6Q3LI70 58 aa8.34□□□□□ -1.07
CHMP3-203ENST00000409225 IGFL1Q6UW32 110 aa8.32□□□□□ -1.08
CHMP3-203ENST00000409225 C20orf166-AS1Q96NR2 134 aa8.32□□□□□ -1.08
CHMP3-203ENST00000409225 YPEL4Q96NS1 127 aa8.32□□□□□ -1.08
CHMP3-203ENST00000409225 APOC3P02656 99 aa8.31□□□□□ -1.08
CHMP3-203ENST00000409225 KRTAP6-3Q3LI67 103 aa8.31□□□□□ -1.08
CHMP3-203ENST00000409225 NHP2Q9NX24 153 aaKnown RBP8.31□□□□□ -1.08
CHMP3-203ENST00000409225 A6NDN8 102 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms