RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 FLNBO75369 2602 aaKnown RBP10.93□□□□□ -0.66
NUP50-203ENST00000407019 IGLV5-37A0A075B6J1 123 aa10.91□□□□□ -0.66
NUP50-203ENST00000407019 CRYGAP11844 174 aa10.91□□□□□ -0.66
NUP50-203ENST00000407019 LINC01547P58512 204 aaPredicted RBP10.91□□□□□ -0.66
NUP50-203ENST00000407019 HUWE1Q7Z6Z7 4374 aaKnown RBP10.91□□□□□ -0.66
NUP50-203ENST00000407019 HAMPP81172 84 aa10.91□□□□□ -0.66
NUP50-203ENST00000407019 BAHCC1Q9P281 2608 aa10.91□□□□□ -0.66
NUP50-203ENST00000407019 DNAH1Q9P2D7 4330 aa10.9□□□□□ -0.67
NUP50-203ENST00000407019 FAM168BA1KXE4 195 aa10.89□□□□□ -0.67
NUP50-203ENST00000407019 PRYO14603 147 aa10.89□□□□□ -0.67
NUP50-203ENST00000407019 RPL37AP8A6NKH3 93 aa10.88□□□□□ -0.67
NUP50-203ENST00000407019 NOTCH1P46531 2555 aa10.87□□□□□ -0.67
NUP50-203ENST00000407019 IGLV1-50A0A075B6I6 118 aa10.87□□□□□ -0.67
NUP50-203ENST00000407019 CXCL6P80162 114 aa10.87□□□□□ -0.67
NUP50-203ENST00000407019 Q6ZRX8 168 aa10.86□□□□□ -0.67
NUP50-203ENST00000407019 DHRS4-AS1Q9P1J3 65 aa10.86□□□□□ -0.67
NUP50-203ENST00000407019 LOC107984640A0A0U1RRK4 108 aa10.86□□□□□ -0.67
NUP50-203ENST00000407019 KRTAP7-1Q8IUC3 87 aa10.85□□□□□ -0.67
NUP50-203ENST00000407019 ETDCA0A1B0GVM5 59 aa10.85□□□□□ -0.67
NUP50-203ENST00000407019 KRTAP4-16G5E9R7 235 aaPredicted RBP10.85□□□□□ -0.67
NUP50-203ENST00000407019 SPRR1AP35321 89 aa10.85□□□□□ -0.67
NUP50-203ENST00000407019 Q8N377 158 aa10.85□□□□□ -0.67
NUP50-203ENST00000407019 DEFB105AQ8NG35 78 aa10.85□□□□□ -0.67
NUP50-203ENST00000407019 FAM19A5Q7Z5A7 132 aaPredicted RBP10.83□□□□□ -0.68
NUP50-203ENST00000407019 MRPL55Q7Z7F7 128 aaKnown RBP10.83□□□□□ -0.68
NUP50-203ENST00000407019 Q9BRP9 147 aa10.82□□□□□ -0.68
NUP50-203ENST00000407019 BCE1O60756 84 aa10.8□□□□□ -0.68
NUP50-203ENST00000407019 CYSTM1Q9H1C7 97 aa10.8□□□□□ -0.68
NUP50-203ENST00000407019 COL6A5A8TX70 2615 aa10.8□□□□□ -0.68
NUP50-203ENST00000407019 IGLV5-48A0A075B6I7 105 aa10.79□□□□□ -0.68
NUP50-203ENST00000407019 SCXQ7RTU7 201 aa10.79□□□□□ -0.68
NUP50-203ENST00000407019 SMIM20Q8N5G0 67 aa10.79□□□□□ -0.68
NUP50-203ENST00000407019 KRTAP1-5Q9BYS1 174 aa10.78□□□□□ -0.68
NUP50-203ENST00000407019 UBE2DNLQ8IWF7 75 aa10.77□□□□□ -0.69
NUP50-203ENST00000407019 NBEAL1Q6ZS30 2694 aa10.76□□□□□ -0.69
NUP50-203ENST00000407019 ST20-AS1Q8NBB2 130 aa10.75□□□□□ -0.69
NUP50-203ENST00000407019 PSCAO43653 123 aa10.75□□□□□ -0.69
NUP50-203ENST00000407019 REG3GQ6UW15 175 aa10.75□□□□□ -0.69
NUP50-203ENST00000407019 CNBPP62633 177 aaKnown RBP10.74□□□□□ -0.69
NUP50-203ENST00000407019 UBE2BP63146 152 aa10.74□□□□□ -0.69
NUP50-203ENST00000407019 NREPQ16612 68 aa10.74□□□□□ -0.69
NUP50-203ENST00000407019 APLNQ9ULZ1 77 aa10.74□□□□□ -0.69
NUP50-203ENST00000407019 TRAV7A0A075B6U4 112 aa10.73□□□□□ -0.69
NUP50-203ENST00000407019 C3orf84H3BNL1 204 aa10.73□□□□□ -0.69
NUP50-203ENST00000407019 A0A096LNI7 61 aa10.72□□□□□ -0.69
NUP50-203ENST00000407019 C16orf90A8MZG2 172 aa10.72□□□□□ -0.69
NUP50-203ENST00000407019 ERC2-IT1O76042 136 aa10.72□□□□□ -0.69
NUP50-203ENST00000407019 TMEM258P61165 79 aa10.72□□□□□ -0.69
NUP50-203ENST00000407019 TNP2Q05952 138 aa10.72□□□□□ -0.69
NUP50-203ENST00000407019 FUSP35637 526 aaKnown RBP eCLIP10.71□□□□□ -0.69
NUP50-203ENST00000407019 IGKV2-24A0A0C4DH68 120 aa10.7□□□□□ -0.7
NUP50-203ENST00000407019 A0A1B0GW54 56 aa10.7□□□□□ -0.7
NUP50-203ENST00000407019 C1orf137Q5JT78 98 aa10.7□□□□□ -0.7
NUP50-203ENST00000407019 C14orf177Q52M58 125 aa10.69□□□□□ -0.7
NUP50-203ENST00000407019 C20orf197Q8N268 126 aa10.69□□□□□ -0.7
NUP50-203ENST00000407019 A0A1W2PNM2 257 aa10.68□□□□□ -0.7
NUP50-203ENST00000407019 BPY2O14599 106 aa10.67□□□□□ -0.7
NUP50-203ENST00000407019 B9D2Q9BPU9 175 aa10.67□□□□□ -0.7
NUP50-203ENST00000407019 A0A1W2PNN7 141 aa10.67□□□□□ -0.7
NUP50-203ENST00000407019 IGKV4-1P06312 121 aa10.67□□□□□ -0.7
NUP50-203ENST00000407019 DNAH9Q9NYC9 4486 aa10.67□□□□□ -0.7
NUP50-203ENST00000407019 Q8NBF4 154 aa10.66□□□□□ -0.7
NUP50-203ENST00000407019 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.65□□□□□ -0.7
NUP50-203ENST00000407019 Q8N9L7 120 aa10.65□□□□□ -0.7
NUP50-203ENST00000407019 J3KT08 172 aa10.64□□□□□ -0.71
NUP50-203ENST00000407019 MGAM2Q2M2H8 2515 aa10.64□□□□□ -0.71
NUP50-203ENST00000407019 DNAH10Q8IVF4 4471 aa10.63□□□□□ -0.71
NUP50-203ENST00000407019 SPRR4Q96PI1 79 aa10.62□□□□□ -0.71
NUP50-203ENST00000407019 MDFIQ99750 246 aa10.62□□□□□ -0.71
NUP50-203ENST00000407019 PRLHP81277 87 aa10.62□□□□□ -0.71
NUP50-203ENST00000407019 SMIM29Q86T20 159 aa10.62□□□□□ -0.71
NUP50-203ENST00000407019 F8WEM9 126 aa10.61□□□□□ -0.71
NUP50-203ENST00000407019 DYNC2H1Q8NCM8 4307 aaKnown RBP10.6□□□□□ -0.71
NUP50-203ENST00000407019 RPS28P62857 69 aaKnown RBP10.6□□□□□ -0.71
NUP50-203ENST00000407019 CHTF8P0CG12 524 aa10.59□□□□□ -0.71
NUP50-203ENST00000407019 KLKP1Q107X0 134 aa10.59□□□□□ -0.71
NUP50-203ENST00000407019 LINC00476Q8WZB0 136 aa10.59□□□□□ -0.71
NUP50-203ENST00000407019 DPH3Q96FX2 82 aa10.59□□□□□ -0.71
NUP50-203ENST00000407019 COL7A1Q02388 2944 aa10.59□□□□□ -0.71
NUP50-203ENST00000407019 STAB2Q8WWQ8 2551 aa10.58□□□□□ -0.72
NUP50-203ENST00000407019 NUPR2A6NF83 97 aa10.58□□□□□ -0.72
NUP50-203ENST00000407019 NBDYA0A0U1RRE5 68 aa10.57□□□□□ -0.72
NUP50-203ENST00000407019 HIGD2AQ9BW72 106 aa10.57□□□□□ -0.72
NUP50-203ENST00000407019 PHF5AQ7RTV0 110 aaKnown RBP10.57□□□□□ -0.72
NUP50-203ENST00000407019 PKIGQ9Y2B9 76 aa10.57□□□□□ -0.72
NUP50-203ENST00000407019 LRCOL1A6NCL2 159 aa10.56□□□□□ -0.72
NUP50-203ENST00000407019 C9orf163Q8N9P6 203 aa10.56□□□□□ -0.72
NUP50-203ENST00000407019 LYSTQ99698 3801 aa10.55□□□□□ -0.72
NUP50-203ENST00000407019 H7BZZ5 65 aa10.55□□□□□ -0.72
NUP50-203ENST00000407019 SNURFQ9Y675 71 aa10.55□□□□□ -0.72
NUP50-203ENST00000407019 IGFL1Q6UW32 110 aa10.54□□□□□ -0.72
NUP50-203ENST00000407019 KRTAP11-1Q8IUC1 163 aa10.53□□□□□ -0.72
NUP50-203ENST00000407019 IGLV8-61A0A075B6I0 122 aa10.53□□□□□ -0.72
NUP50-203ENST00000407019 FAM236DA0A1B0GTK5 79 aa10.52□□□□□ -0.73
NUP50-203ENST00000407019 FAM236CP0DP71 79 aa10.52□□□□□ -0.73
NUP50-203ENST00000407019 Q6ZRN7 208 aaPredicted RBP10.52□□□□□ -0.73
NUP50-203ENST00000407019 H0Y9J4 135 aa10.51□□□□□ -0.73
NUP50-203ENST00000407019 OCR1Q9BZK8 76 aa10.51□□□□□ -0.73
NUP50-203ENST00000407019 EPM2AB3EWF7 344 aa10.51□□□□□ -0.73
NUP50-203ENST00000407019 UBE2AP49459 152 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms