RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 RGPD4Q7Z3J3 1758 aa-0.27□□□□□ -2.45
CBX3P9-201ENST00000402326 QSER1Q2KHR3 1735 aa-0.27□□□□□ -2.45
CBX3P9-201ENST00000402326 NIPBLQ6KC79 2804 aaeCLIP-0.27□□□□□ -2.45
CBX3P9-201ENST00000402326 NEXMIFQ5QGS0 1516 aa-0.27□□□□□ -2.45
CBX3P9-201ENST00000402326 LRRC7Q96NW7 1537 aa-0.27□□□□□ -2.45
CBX3P9-201ENST00000402326 MAGI2Q86UL8 1455 aa-0.27□□□□□ -2.45
CBX3P9-201ENST00000402326 SONP18583 2426 aaKnown RBP-0.27□□□□□ -2.45
CBX3P9-201ENST00000402326 CLIP1P30622 1438 aa-0.27□□□□□ -2.45
CBX3P9-201ENST00000402326 COX7BP24311 80 aa-0.27□□□□□ -2.45
CBX3P9-201ENST00000402326 MT4P47944 62 aa-0.27□□□□□ -2.45
CBX3P9-201ENST00000402326 SMIM11AP58511 58 aa-0.27□□□□□ -2.45
CBX3P9-201ENST00000402326 Q9H521 79 aa-0.27□□□□□ -2.45
CBX3P9-201ENST00000402326 COL6A5A8TX70 2615 aa-0.27□□□□□ -2.45
CBX3P9-201ENST00000402326 BIRC6Q9NR09 4857 aa-0.27□□□□□ -2.45
CBX3P9-201ENST00000402326 USP9YO00507 2555 aaPredicted RBP-0.27□□□□□ -2.45
CBX3P9-201ENST00000402326 RGPD1P0DJD0 1748 aa-0.27□□□□□ -2.45
CBX3P9-201ENST00000402326 NBEAL2Q6ZNJ1 2754 aa-0.28□□□□□ -2.45
CBX3P9-201ENST00000402326 FAT3Q8TDW7 4589 aa-0.28□□□□□ -2.45
CBX3P9-201ENST00000402326 WFDC13Q8IUB5 93 aa-0.28□□□□□ -2.45
CBX3P9-201ENST00000402326 CDKN2A-AS1Q9UH64 79 aa-0.28□□□□□ -2.45
CBX3P9-201ENST00000402326 RGPD3A6NKT7 1758 aaPredicted RBP-0.28□□□□□ -2.45
CBX3P9-201ENST00000402326 ATP7BP35670 1465 aa-0.29□□□□□ -2.46
CBX3P9-201ENST00000402326 DNHD1Q96M86 4753 aa-0.29□□□□□ -2.46
CBX3P9-201ENST00000402326 MYO18BQ8IUG5 2567 aa-0.29□□□□□ -2.46
CBX3P9-201ENST00000402326 COL6A3P12111 3177 aa-0.29□□□□□ -2.46
CBX3P9-201ENST00000402326 PREX1Q8TCU6 1659 aa-0.29□□□□□ -2.46
CBX3P9-201ENST00000402326 A0A1B0GUT8 65 aa-0.29□□□□□ -2.46
CBX3P9-201ENST00000402326 IQCF6A8MYZ5 107 aa-0.29□□□□□ -2.46
CBX3P9-201ENST00000402326 PLGLAQ15195 96 aa-0.29□□□□□ -2.46
CBX3P9-201ENST00000402326 C9orf62Q8N4C0 152 aa-0.29□□□□□ -2.46
CBX3P9-201ENST00000402326 FLNBO75369 2602 aaKnown RBP-0.29□□□□□ -2.46
CBX3P9-201ENST00000402326 UBR3Q6ZT12 1888 aa-0.29□□□□□ -2.46
CBX3P9-201ENST00000402326 WDR87Q6ZQQ6 2873 aa-0.29□□□□□ -2.46
CBX3P9-201ENST00000402326 TTC37Q6PGP7 1564 aa-0.3□□□□□ -2.46
CBX3P9-201ENST00000402326 KRTAP19-8Q3LI54 63 aa-0.3□□□□□ -2.46
CBX3P9-201ENST00000402326 GAFA1Q96PS6 74 aa-0.3□□□□□ -2.46
CBX3P9-201ENST00000402326 HECTD1Q9ULT8 2610 aa-0.3□□□□□ -2.46
CBX3P9-201ENST00000402326 MAP1AP78559 2803 aaPredicted RBP-0.3□□□□□ -2.46
CBX3P9-201ENST00000402326 ITPR3Q14573 2671 aa-0.31□□□□□ -2.46
CBX3P9-201ENST00000402326 K7EP34 96 aa-0.31□□□□□ -2.46
CBX3P9-201ENST00000402326 V9GYS6 101 aa-0.31□□□□□ -2.46
CBX3P9-201ENST00000402326 SUPT6HQ7KZ85 1726 aaKnown RBP-0.31□□□□□ -2.46
CBX3P9-201ENST00000402326 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.31□□□□□ -2.46
CBX3P9-201ENST00000402326 TMEM131LA2VDJ0 1609 aa-0.31□□□□□ -2.46
CBX3P9-201ENST00000402326 COL12A1Q99715 3063 aa-0.32□□□□□ -2.46
CBX3P9-201ENST00000402326 RIF1Q5UIP0 2472 aaKnown RBP-0.32□□□□□ -2.46
CBX3P9-201ENST00000402326 LRRC9Q6ZRR7 1453 aa-0.32□□□□□ -2.46
CBX3P9-201ENST00000402326 MYMXA0A1B0GTQ4 84 aa-0.32□□□□□ -2.46
CBX3P9-201ENST00000402326 PYY3Q5JQD4 70 aa-0.32□□□□□ -2.46
CBX3P9-201ENST00000402326 S100A16Q96FQ6 103 aaKnown RBP-0.32□□□□□ -2.46
CBX3P9-201ENST00000402326 LAMA5O15230 3695 aa-0.33□□□□□ -2.46
CBX3P9-201ENST00000402326 CNOT1A5YKK6 2376 aaKnown RBP-0.33□□□□□ -2.46
CBX3P9-201ENST00000402326 PCNX1Q96RV3 2341 aa-0.33□□□□□ -2.46
CBX3P9-201ENST00000402326 TRAV21A0A0B4J279 112 aa-0.33□□□□□ -2.46
CBX3P9-201ENST00000402326 CYB5AP00167 134 aa-0.33□□□□□ -2.46
CBX3P9-201ENST00000402326 KRTAP6-2Q3LI66 62 aa-0.33□□□□□ -2.46
CBX3P9-201ENST00000402326 PLIN4Q96Q06 1357 aa-0.33□□□□□ -2.46
CBX3P9-201ENST00000402326 ABCC3O15438 1527 aa-0.33□□□□□ -2.46
CBX3P9-201ENST00000402326 ITPR2Q14571 2701 aa-0.34□□□□□ -2.46
CBX3P9-201ENST00000402326 NDUFA3O95167 84 aa-0.34□□□□□ -2.46
CBX3P9-201ENST00000402326 POLR1AO95602 1720 aaPredicted RBP-0.34□□□□□ -2.46
CBX3P9-201ENST00000402326 RPL38P63173 70 aaKnown RBP-0.34□□□□□ -2.46
CBX3P9-201ENST00000402326 WFDC9Q8NEX5 89 aa-0.34□□□□□ -2.46
CBX3P9-201ENST00000402326 PKHD1P08F94 4074 aa-0.35□□□□□ -2.47
CBX3P9-201ENST00000402326 C4AP0C0L4 1744 aa-0.35□□□□□ -2.47
CBX3P9-201ENST00000402326 C4BP0C0L5 1744 aa-0.35□□□□□ -2.47
CBX3P9-201ENST00000402326 FASNP49327 2511 aaKnown RBP-0.35□□□□□ -2.47
CBX3P9-201ENST00000402326 PVALEFA0A1B0GWK0 134 aa-0.35□□□□□ -2.47
CBX3P9-201ENST00000402326 SNRPFP62306 86 aaKnown RBP-0.35□□□□□ -2.47
CBX3P9-201ENST00000402326 KRTAP20-1Q3LI63 56 aa-0.35□□□□□ -2.47
CBX3P9-201ENST00000402326 ZNF831Q5JPB2 1677 aa-0.35□□□□□ -2.47
CBX3P9-201ENST00000402326 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.35□□□□□ -2.47
CBX3P9-201ENST00000402326 KIF14Q15058 1648 aa-0.35□□□□□ -2.47
CBX3P9-201ENST00000402326 USP32Q8NFA0 1604 aa-0.35□□□□□ -2.47
CBX3P9-201ENST00000402326 CICQ96RK0 1608 aaPredicted RBP-0.35□□□□□ -2.47
CBX3P9-201ENST00000402326 CCDC168Q8NDH2 2452 aa-0.36□□□□□ -2.47
CBX3P9-201ENST00000402326 ADAMTS12P58397 1594 aa-0.36□□□□□ -2.47
CBX3P9-201ENST00000402326 MXRA5Q9NR99 2828 aa-0.36□□□□□ -2.47
CBX3P9-201ENST00000402326 SVEP1Q4LDE5 3571 aa-0.36□□□□□ -2.47
CBX3P9-201ENST00000402326 RGPD8O14715 1765 aaPredicted RBP-0.36□□□□□ -2.47
CBX3P9-201ENST00000402326 LTN1O94822 1766 aa-0.36□□□□□ -2.47
CBX3P9-201ENST00000402326 RGPD5Q99666 1765 aa-0.36□□□□□ -2.47
CBX3P9-201ENST00000402326 NBPF19A0A087WUL8 3843 aa-0.36□□□□□ -2.47
CBX3P9-201ENST00000402326 CEBPZOSA8MTT3 80 aa-0.36□□□□□ -2.47
CBX3P9-201ENST00000402326 LINC00643Q86TS7 51 aa-0.36□□□□□ -2.47
CBX3P9-201ENST00000402326 PTPN23Q9H3S7 1636 aa-0.36□□□□□ -2.47
CBX3P9-201ENST00000402326 KNL1Q8NG31 2342 aa-0.36□□□□□ -2.47
CBX3P9-201ENST00000402326 TIAM2Q8IVF5 1701 aa-0.37□□□□□ -2.47
CBX3P9-201ENST00000402326 DOT1LQ8TEK3 1739 aa-0.37□□□□□ -2.47
CBX3P9-201ENST00000402326 SPRR2AP35326 72 aa-0.37□□□□□ -2.47
CBX3P9-201ENST00000402326 CELSR3Q9NYQ7 3312 aa-0.37□□□□□ -2.47
CBX3P9-201ENST00000402326 FLGP20930 4061 aaPredicted RBP-0.37□□□□□ -2.47
CBX3P9-201ENST00000402326 PRRC2CQ9Y520 2896 aaKnown RBP-0.37□□□□□ -2.47
CBX3P9-201ENST00000402326 PPLO60437 1756 aa-0.37□□□□□ -2.47
CBX3P9-201ENST00000402326 AKAP13Q12802 2813 aa-0.37□□□□□ -2.47
CBX3P9-201ENST00000402326 GCN1Q92616 2671 aaKnown RBP-0.38□□□□□ -2.47
CBX3P9-201ENST00000402326 MAP3K4Q9Y6R4 1608 aa-0.38□□□□□ -2.47
CBX3P9-201ENST00000402326 TDRG1Q3Y452 100 aa-0.38□□□□□ -2.47
CBX3P9-201ENST00000402326 RABAC1Q9UI14 185 aa-0.38□□□□□ -2.47
CBX3P9-201ENST00000402326 NCOA2Q15596 1464 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms