RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.27□□□□□ -0.61
SNRNP70-202ENST00000401730 PKIGQ9Y2B9 76 aa11.27□□□□□ -0.61
SNRNP70-202ENST00000401730 TRAV7A0A075B6U4 112 aa11.26□□□□□ -0.61
SNRNP70-202ENST00000401730 RPL37AP8A6NKH3 93 aa11.26□□□□□ -0.61
SNRNP70-202ENST00000401730 VPREB1P12018 145 aa11.26□□□□□ -0.61
SNRNP70-202ENST00000401730 TM2D3Q9BRN9 247 aa11.26□□□□□ -0.61
SNRNP70-202ENST00000401730 LINC00474Q9P2X8 69 aa11.25□□□□□ -0.61
SNRNP70-202ENST00000401730 MUC7Q8TAX7 377 aa11.24□□□□□ -0.61
SNRNP70-202ENST00000401730 CASC10Q5T4H9 136 aa11.23□□□□□ -0.61
SNRNP70-202ENST00000401730 C11orf45Q8TAV5 145 aa11.22□□□□□ -0.61
SNRNP70-202ENST00000401730 SERP1Q9Y6X1 66 aa11.22□□□□□ -0.61
SNRNP70-202ENST00000401730 NDUFC2-KCTD14E9PQ53 114 aa11.22□□□□□ -0.61
SNRNP70-202ENST00000401730 KRTAP26-1Q6PEX3 210 aa11.22□□□□□ -0.61
SNRNP70-202ENST00000401730 MPLKIPQ8TAP9 179 aa11.22□□□□□ -0.61
SNRNP70-202ENST00000401730 FAM168BA1KXE4 195 aa11.21□□□□□ -0.61
SNRNP70-202ENST00000401730 C3orf84H3BNL1 204 aa11.21□□□□□ -0.61
SNRNP70-202ENST00000401730 SERTAD4-AS1Q5TG53 156 aa11.21□□□□□ -0.61
SNRNP70-202ENST00000401730 TENM2Q9NT68 2774 aa11.21□□□□□ -0.62
SNRNP70-202ENST00000401730 STAB2Q8WWQ8 2551 aa11.2□□□□□ -0.62
SNRNP70-202ENST00000401730 WIPF1O43516 503 aa11.2□□□□□ -0.62
SNRNP70-202ENST00000401730 GVQW2A0A096LPI5 108 aaPredicted RBP11.2□□□□□ -0.62
SNRNP70-202ENST00000401730 A0A0U1RQV1 116 aa11.2□□□□□ -0.62
SNRNP70-202ENST00000401730 EGFEM1PQ0D2K5 195 aa11.19□□□□□ -0.62
SNRNP70-202ENST00000401730 SYCNQ0VAF6 134 aa11.19□□□□□ -0.62
SNRNP70-202ENST00000401730 M0R378 163 aa11.19□□□□□ -0.62
SNRNP70-202ENST00000401730 ELOF1P60002 83 aaKnown RBP11.19□□□□□ -0.62
SNRNP70-202ENST00000401730 NKAPP1Q8N9T2 125 aa11.18□□□□□ -0.62
SNRNP70-202ENST00000401730 KRTAP24-1Q3LI83 254 aa11.18□□□□□ -0.62
SNRNP70-202ENST00000401730 BRK1Q8WUW1 75 aa11.18□□□□□ -0.62
SNRNP70-202ENST00000401730 LOC110117498A0A087WWA1 95 aa11.15□□□□□ -0.62
SNRNP70-202ENST00000401730 TRBV7-6A0A0J9YX20 115 aa11.15□□□□□ -0.62
SNRNP70-202ENST00000401730 FP248Q71RG6 208 aaPredicted RBP11.15□□□□□ -0.63
SNRNP70-202ENST00000401730 NREPQ16612 68 aa11.14□□□□□ -0.63
SNRNP70-202ENST00000401730 KLKP1Q107X0 134 aa11.13□□□□□ -0.63
SNRNP70-202ENST00000401730 C7orf33Q8WU49 177 aa11.13□□□□□ -0.63
SNRNP70-202ENST00000401730 LINC00528Q8N1L1 170 aa11.13□□□□□ -0.63
SNRNP70-202ENST00000401730 SRRM2Q9UQ35 2752 aaKnown RBP11.12□□□□□ -0.63
SNRNP70-202ENST00000401730 BPY2O14599 106 aa11.12□□□□□ -0.63
SNRNP70-202ENST00000401730 SMIM26A0A096LP01 95 aa11.11□□□□□ -0.63
SNRNP70-202ENST00000401730 A0A0G2JQZ4 141 aa11.11□□□□□ -0.63
SNRNP70-202ENST00000401730 A0A1W2PNN7 141 aa11.11□□□□□ -0.63
SNRNP70-202ENST00000401730 ST20-AS1Q8NBB2 130 aa11.11□□□□□ -0.63
SNRNP70-202ENST00000401730 PRO0628Q9UI54 55 aa11.11□□□□□ -0.63
SNRNP70-202ENST00000401730 TRBV7-4A0A0J9YYF1 115 aa11.1□□□□□ -0.63
SNRNP70-202ENST00000401730 LRCOL1A6NCL2 159 aa11.1□□□□□ -0.63
SNRNP70-202ENST00000401730 TMEM254Q8TBM7 123 aa11.09□□□□□ -0.63
SNRNP70-202ENST00000401730 LINC01556Q5JQF7 62 aa11.09□□□□□ -0.63
SNRNP70-202ENST00000401730 LINC00588Q9Y4M8 146 aa11.08□□□□□ -0.64
SNRNP70-202ENST00000401730 CXCL6P80162 114 aa11.07□□□□□ -0.64
SNRNP70-202ENST00000401730 FAM229BQ4G0N7 80 aa11.07□□□□□ -0.64
SNRNP70-202ENST00000401730 LYSTQ99698 3801 aa11.07□□□□□ -0.64
SNRNP70-202ENST00000401730 IGKV2-24A0A0C4DH68 120 aa11.05□□□□□ -0.64
SNRNP70-202ENST00000401730 Q8N377 158 aa11.05□□□□□ -0.64
SNRNP70-202ENST00000401730 H3BNG1 76 aa11.04□□□□□ -0.64
SNRNP70-202ENST00000401730 PDE6GP18545 87 aa11.04□□□□□ -0.64
SNRNP70-202ENST00000401730 HIGD2AQ9BW72 106 aa11.03□□□□□ -0.64
SNRNP70-202ENST00000401730 ETDCA0A1B0GVM5 59 aa11.02□□□□□ -0.64
SNRNP70-202ENST00000401730 ERC2-IT1O76042 136 aa11.02□□□□□ -0.64
SNRNP70-202ENST00000401730 CMYA5Q8N3K9 4069 aa11.02□□□□□ -0.65
SNRNP70-202ENST00000401730 UBE2BP63146 152 aa11.02□□□□□ -0.65
SNRNP70-202ENST00000401730 FAM30AQ9NZY2 134 aa11.02□□□□□ -0.65
SNRNP70-202ENST00000401730 Q9BRP9 147 aa11.01□□□□□ -0.65
SNRNP70-202ENST00000401730 DNAH10Q8IVF4 4471 aa11.01□□□□□ -0.65
SNRNP70-202ENST00000401730 FUSP35637 526 aaKnown RBP eCLIP10.99□□□□□ -0.656e-8■■□□□ 12.7
SNRNP70-202ENST00000401730 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.99□□□□□ -0.65
SNRNP70-202ENST00000401730 EPM2AB3EWF7 344 aa10.99□□□□□ -0.65
SNRNP70-202ENST00000401730 KRTAP7-1Q8IUC3 87 aa10.99□□□□□ -0.65
SNRNP70-202ENST00000401730 BCE1O60756 84 aa10.98□□□□□ -0.65
SNRNP70-202ENST00000401730 PRR4Q16378 134 aa10.98□□□□□ -0.65
SNRNP70-202ENST00000401730 KCNQ1DNQ9H478 68 aa10.98□□□□□ -0.65
SNRNP70-202ENST00000401730 PRYO14603 147 aa10.98□□□□□ -0.65
SNRNP70-202ENST00000401730 NDUFC1O43677 76 aa10.98□□□□□ -0.65
SNRNP70-202ENST00000401730 DNAH10OSP0CZ25 163 aa10.98□□□□□ -0.65
SNRNP70-202ENST00000401730 DEFB116Q30KQ4 102 aa10.98□□□□□ -0.65
SNRNP70-202ENST00000401730 COL7A1Q02388 2944 aa10.97□□□□□ -0.65
SNRNP70-202ENST00000401730 IGKV4-1P06312 121 aa10.95□□□□□ -0.66
SNRNP70-202ENST00000401730 Q6ZRX8 168 aa10.95□□□□□ -0.66
SNRNP70-202ENST00000401730 PRLHP81277 87 aa10.94□□□□□ -0.66
SNRNP70-202ENST00000401730 H3BQ85 93 aa10.93□□□□□ -0.66
SNRNP70-202ENST00000401730 IGLV1-50A0A075B6I6 118 aa10.93□□□□□ -0.66
SNRNP70-202ENST00000401730 C1orf137Q5JT78 98 aa10.93□□□□□ -0.66
SNRNP70-202ENST00000401730 A0A1W2PNM2 257 aa10.93□□□□□ -0.66
SNRNP70-202ENST00000401730 SMIM29Q86T20 159 aa10.93□□□□□ -0.66
SNRNP70-202ENST00000401730 MRPL55Q7Z7F7 128 aaKnown RBP10.92□□□□□ -0.66
SNRNP70-202ENST00000401730 HUWE1Q7Z6Z7 4374 aaKnown RBP10.9□□□□□ -0.66
SNRNP70-202ENST00000401730 K7EIL1 84 aa10.9□□□□□ -0.66
SNRNP70-202ENST00000401730 PSCAO43653 123 aa10.9□□□□□ -0.66
SNRNP70-202ENST00000401730 CHTF8P0CG12 524 aa10.89□□□□□ -0.67
SNRNP70-202ENST00000401730 C1orf195Q5TG92 126 aa10.89□□□□□ -0.67
SNRNP70-202ENST00000401730 KRTAP1-5Q9BYS1 174 aa10.89□□□□□ -0.67
SNRNP70-202ENST00000401730 A0A096LNI7 61 aa10.88□□□□□ -0.67
SNRNP70-202ENST00000401730 OCR1Q9BZK8 76 aa10.88□□□□□ -0.67
SNRNP70-202ENST00000401730 ATP5EP56381 51 aaPredicted RBP10.88□□□□□ -0.67
SNRNP70-202ENST00000401730 DHRS4-AS1Q9P1J3 65 aa10.87□□□□□ -0.67
SNRNP70-202ENST00000401730 KRTAP4-16G5E9R7 235 aaPredicted RBP10.85□□□□□ -0.67
SNRNP70-202ENST00000401730 PSPHP1O15172 72 aa10.84□□□□□ -0.67
SNRNP70-202ENST00000401730 REG3GQ6UW15 175 aa10.84□□□□□ -0.67
SNRNP70-202ENST00000401730 UBE2DNLQ8IWF7 75 aa10.83□□□□□ -0.68
SNRNP70-202ENST00000401730 IGLV5-48A0A075B6I7 105 aa10.83□□□□□ -0.68
SNRNP70-202ENST00000401730 TLX1NBP0CAT3 122 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms