RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 IGHV4-30-4P0DP06 118 aa10.68□□□□□ -0.7
CHMP1A-201ENST00000397901 LELP1Q5T871 98 aa10.67□□□□□ -0.7
CHMP1A-201ENST00000397901 IGKV4-1P06312 121 aa10.66□□□□□ -0.7
CHMP1A-201ENST00000397901 APOC4P55056 127 aa10.66□□□□□ -0.7
CHMP1A-201ENST00000397901 Q8NAQ8 132 aa10.66□□□□□ -0.7
CHMP1A-201ENST00000397901 TEP1Q99973 2627 aaKnown RBP10.66□□□□□ -0.7
CHMP1A-201ENST00000397901 C6orf48Q9UBA6 75 aa10.65□□□□□ -0.7
CHMP1A-201ENST00000397901 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.65□□□□□ -0.7
CHMP1A-201ENST00000397901 ATRQ13535 2644 aa10.65□□□□□ -0.71
CHMP1A-201ENST00000397901 hDV103S1A0JD37 113 aa10.64□□□□□ -0.71
CHMP1A-201ENST00000397901 Q1T7F1 81 aa10.64□□□□□ -0.71
CHMP1A-201ENST00000397901 HIGD2AQ9BW72 106 aa10.64□□□□□ -0.71
CHMP1A-201ENST00000397901 PRR34Q9NV39 138 aa10.64□□□□□ -0.71
CHMP1A-201ENST00000397901 COX7BP24311 80 aa10.63□□□□□ -0.71
CHMP1A-201ENST00000397901 DIRC1Q969H9 104 aa10.63□□□□□ -0.71
CHMP1A-201ENST00000397901 SPART-AS1P0CW21 52 aa10.62□□□□□ -0.71
CHMP1A-201ENST00000397901 Q8N9L7 120 aa10.62□□□□□ -0.71
CHMP1A-201ENST00000397901 HIGD2BQ4VC39 106 aa10.61□□□□□ -0.71
CHMP1A-201ENST00000397901 ZNF73O43830 326 aaPredicted RBP10.6□□□□□ -0.71
CHMP1A-201ENST00000397901 GVQW2A0A096LPI5 108 aaPredicted RBP10.6□□□□□ -0.71
CHMP1A-201ENST00000397901 Q6ZRP5 223 aa10.59□□□□□ -0.71
CHMP1A-201ENST00000397901 MAST4O15021 2626 aa10.58□□□□□ -0.72
CHMP1A-201ENST00000397901 CAMK2N2Q96S95 79 aa10.57□□□□□ -0.72
CHMP1A-201ENST00000397901 ELOF1P60002 83 aaKnown RBP10.55□□□□□ -0.72
CHMP1A-201ENST00000397901 WFDC10BQ8IUB3 73 aa10.55□□□□□ -0.72
CHMP1A-201ENST00000397901 C1orf64Q8NEQ6 169 aa10.55□□□□□ -0.72
CHMP1A-201ENST00000397901 LRCOL1A6NCL2 159 aa10.54□□□□□ -0.72
CHMP1A-201ENST00000397901 VPREB1P12018 145 aa10.54□□□□□ -0.72
CHMP1A-201ENST00000397901 CMYA5Q8N3K9 4069 aa10.54□□□□□ -0.72
CHMP1A-201ENST00000397901 LCE6AA0A183 80 aa10.53□□□□□ -0.72
CHMP1A-201ENST00000397901 CD164Q04900 197 aa10.53□□□□□ -0.72
CHMP1A-201ENST00000397901 FAM30AQ9NZY2 134 aa10.51□□□□□ -0.73
CHMP1A-201ENST00000397901 PSPHP1O15172 72 aa10.5□□□□□ -0.73
CHMP1A-201ENST00000397901 F8P00451 2351 aa10.5□□□□□ -0.73
CHMP1A-201ENST00000397901 TRAV22A0A0B4J277 110 aa10.49□□□□□ -0.73
CHMP1A-201ENST00000397901 M0R378 163 aa10.49□□□□□ -0.73
CHMP1A-201ENST00000397901 SMIM29Q86T20 159 aa10.49□□□□□ -0.73
CHMP1A-201ENST00000397901 PKD1L1Q8TDX9 2849 aa10.48□□□□□ -0.73
CHMP1A-201ENST00000397901 EGFEM1PQ0D2K5 195 aa10.48□□□□□ -0.73
CHMP1A-201ENST00000397901 KPRPQ5T749 579 aaPredicted RBP10.48□□□□□ -0.73
CHMP1A-201ENST00000397901 RETNQ9HD89 108 aa10.48□□□□□ -0.73
CHMP1A-201ENST00000397901 ANK2Q01484 3957 aa10.48□□□□□ -0.73
CHMP1A-201ENST00000397901 KRTAP26-1Q6PEX3 210 aa10.48□□□□□ -0.73
CHMP1A-201ENST00000397901 C15orf56Q8N910 161 aa10.48□□□□□ -0.73
CHMP1A-201ENST00000397901 LINC00528Q8N1L1 170 aa10.47□□□□□ -0.73
CHMP1A-201ENST00000397901 ZCCHC13Q8WW36 166 aaKnown RBP10.47□□□□□ -0.73
CHMP1A-201ENST00000397901 CYP4F30PQ9H0H9 118 aa10.45□□□□□ -0.74
CHMP1A-201ENST00000397901 C3orf84H3BNL1 204 aa10.45□□□□□ -0.74
CHMP1A-201ENST00000397901 DNAH3Q8TD57 4116 aa10.44□□□□□ -0.74
CHMP1A-201ENST00000397901 OXLD1Q5BKU9 147 aa10.43□□□□□ -0.74
CHMP1A-201ENST00000397901 KRTAP10-11P60412 298 aa10.43□□□□□ -0.74
CHMP1A-201ENST00000397901 FBN1P35555 2871 aaKnown RBP10.42□□□□□ -0.74
CHMP1A-201ENST00000397901 KRTAP24-1Q3LI83 254 aa10.42□□□□□ -0.74
CHMP1A-201ENST00000397901 PSCAO43653 123 aa10.42□□□□□ -0.74
CHMP1A-201ENST00000397901 DEFB105AQ8NG35 78 aa10.42□□□□□ -0.74
CHMP1A-201ENST00000397901 IGKV2D-24A0A075B6R9 120 aa10.41□□□□□ -0.74
CHMP1A-201ENST00000397901 ETDCA0A1B0GVM5 59 aa10.4□□□□□ -0.74
CHMP1A-201ENST00000397901 SYCNQ0VAF6 134 aa10.4□□□□□ -0.75
CHMP1A-201ENST00000397901 A8MUN3 132 aa10.39□□□□□ -0.75
CHMP1A-201ENST00000397901 A0A1B0GW54 56 aa10.39□□□□□ -0.75
CHMP1A-201ENST00000397901 UBE2BP63146 152 aa10.38□□□□□ -0.75
CHMP1A-201ENST00000397901 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.38□□□□□ -0.75
CHMP1A-201ENST00000397901 SERTAD4-AS1Q5TG53 156 aa10.38□□□□□ -0.75
CHMP1A-201ENST00000397901 NKAPP1Q8N9T2 125 aa10.38□□□□□ -0.75
CHMP1A-201ENST00000397901 MRPL55Q7Z7F7 128 aaKnown RBP10.37□□□□□ -0.75
CHMP1A-201ENST00000397901 TENM3Q9P273 2699 aa10.37□□□□□ -0.75
CHMP1A-201ENST00000397901 STAB1Q9NY15 2570 aa10.36□□□□□ -0.75
CHMP1A-201ENST00000397901 H3BNG1 76 aa10.36□□□□□ -0.75
CHMP1A-201ENST00000397901 C7orf33Q8WU49 177 aa10.35□□□□□ -0.75
CHMP1A-201ENST00000397901 NDUFB1O75438 58 aa10.34□□□□□ -0.75
CHMP1A-201ENST00000397901 Q5VV11 94 aa10.34□□□□□ -0.75
CHMP1A-201ENST00000397901 Q8N377 158 aa10.34□□□□□ -0.75
CHMP1A-201ENST00000397901 IGLV5-48A0A075B6I7 105 aa10.34□□□□□ -0.75
CHMP1A-201ENST00000397901 KTN1-AS1Q86SY8 53 aa10.33□□□□□ -0.76
CHMP1A-201ENST00000397901 KCNQ1DNQ9H478 68 aa10.33□□□□□ -0.76
CHMP1A-201ENST00000397901 UBE2AP49459 152 aa10.33□□□□□ -0.76
CHMP1A-201ENST00000397901 PRR4Q16378 134 aa10.33□□□□□ -0.76
CHMP1A-201ENST00000397901 RPL37AP8A6NKH3 93 aa10.32□□□□□ -0.76
CHMP1A-201ENST00000397901 LINC00588Q9Y4M8 146 aa10.32□□□□□ -0.76
CHMP1A-201ENST00000397901 LINC01556Q5JQF7 62 aa10.31□□□□□ -0.76
CHMP1A-201ENST00000397901 A8MU10 97 aa10.31□□□□□ -0.76
CHMP1A-201ENST00000397901 ST20-AS1Q8NBB2 130 aa10.3□□□□□ -0.76
CHMP1A-201ENST00000397901 DEFB131BA0A096LNP1 70 aa10.29□□□□□ -0.76
CHMP1A-201ENST00000397901 FAM168BA1KXE4 195 aa10.29□□□□□ -0.76
CHMP1A-201ENST00000397901 A0A1W2PNM2 257 aa10.28□□□□□ -0.76
CHMP1A-201ENST00000397901 DSCR10P59022 87 aa10.28□□□□□ -0.76
CHMP1A-201ENST00000397901 B9D2Q9BPU9 175 aa10.27□□□□□ -0.77
CHMP1A-201ENST00000397901 LIMD2Q9BT23 127 aa10.27□□□□□ -0.77
CHMP1A-201ENST00000397901 RBM12B-AS1Q9P1G2 102 aa10.27□□□□□ -0.77
CHMP1A-201ENST00000397901 CHKB-CPT1BH3BT56 60 aa10.27□□□□□ -0.77
CHMP1A-201ENST00000397901 Q9BRP9 147 aa10.27□□□□□ -0.77
CHMP1A-201ENST00000397901 C16orf90A8MZG2 172 aa10.26□□□□□ -0.77
CHMP1A-201ENST00000397901 K7EQZ3 153 aa10.26□□□□□ -0.77
CHMP1A-201ENST00000397901 Q6ZRX8 168 aa10.26□□□□□ -0.77
CHMP1A-201ENST00000397901 HCG22E2RYF7 251 aa10.25□□□□□ -0.77
CHMP1A-201ENST00000397901 PRB2P02812 416 aaPredicted RBP10.25□□□□□ -0.77
CHMP1A-201ENST00000397901 CASC10Q5T4H9 136 aa10.25□□□□□ -0.77
CHMP1A-201ENST00000397901 Q8NBF4 154 aa10.25□□□□□ -0.77
CHMP1A-201ENST00000397901 C11orf45Q8TAV5 145 aa10.24□□□□□ -0.77
CHMP1A-201ENST00000397901 DHRS4-AS1Q9P1J3 65 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms