RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 SYS1-DBNDD2H3BUS1 97 aa10.6□□□□□ -0.71
MCF2L-207ENST00000397024 SSBP3-AS1Q7Z2R9 100 aa10.6□□□□□ -0.71
MCF2L-207ENST00000397024 HIST1H2BKO60814 126 aa10.59□□□□□ -0.71
MCF2L-207ENST00000397024 HIST1H2BJP06899 126 aa10.59□□□□□ -0.71
MCF2L-207ENST00000397024 HIST1H2BOP23527 126 aa10.59□□□□□ -0.71
MCF2L-207ENST00000397024 HIST1H2BBP33778 126 aa10.59□□□□□ -0.71
MCF2L-207ENST00000397024 HIST1H2BDP58876 126 aa10.59□□□□□ -0.71
MCF2L-207ENST00000397024 HIST1H2BCP62807 126 aa10.59□□□□□ -0.71
MCF2L-207ENST00000397024 HIST2H2BEQ16778 126 aa10.59□□□□□ -0.71
MCF2L-207ENST00000397024 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.59□□□□□ -0.71
MCF2L-207ENST00000397024 HIST1H2BHQ93079 126 aa10.59□□□□□ -0.71
MCF2L-207ENST00000397024 LITAFQ99732 161 aa10.59□□□□□ -0.71
MCF2L-207ENST00000397024 HIST1H2BNQ99877 126 aa10.59□□□□□ -0.71
MCF2L-207ENST00000397024 HIST1H2BMQ99879 126 aa10.59□□□□□ -0.71
MCF2L-207ENST00000397024 ZNF73O43830 326 aaPredicted RBP10.58□□□□□ -0.72
MCF2L-207ENST00000397024 ST20-AS1Q8NBB2 130 aa10.58□□□□□ -0.72
MCF2L-207ENST00000397024 Q8N377 158 aa10.57□□□□□ -0.72
MCF2L-207ENST00000397024 LINC00308Q8TCZ7 52 aa10.56□□□□□ -0.72
MCF2L-207ENST00000397024 JOSD1Q15040 202 aaPredicted RBP10.55□□□□□ -0.72
MCF2L-207ENST00000397024 LINC01545Q5VT33 79 aa10.55□□□□□ -0.72
MCF2L-207ENST00000397024 TTTY13Q9BZ97 58 aa10.54□□□□□ -0.72
MCF2L-207ENST00000397024 RPS29P62273 56 aaKnown RBP10.53□□□□□ -0.72
MCF2L-207ENST00000397024 TIMM17BO60830 172 aa10.51□□□□□ -0.73
MCF2L-207ENST00000397024 PET117Q6UWS5 81 aa10.51□□□□□ -0.73
MCF2L-207ENST00000397024 OR13C6PQ8NH95 151 aa10.51□□□□□ -0.73
MCF2L-207ENST00000397024 SPANXCQ9NY87 97 aa10.51□□□□□ -0.73
MCF2L-207ENST00000397024 ASB16-AS1Q495Z4 193 aa10.5□□□□□ -0.73
MCF2L-207ENST00000397024 C9orf153Q5TBE3 101 aa10.5□□□□□ -0.73
MCF2L-207ENST00000397024 KRTAP9-2Q9BYQ4 174 aa10.5□□□□□ -0.73
MCF2L-207ENST00000397024 KRTAP4-1Q9BYQ7 146 aa10.5□□□□□ -0.73
MCF2L-207ENST00000397024 ZNF815PA8K554 130 aa10.49□□□□□ -0.73
MCF2L-207ENST00000397024 SLC25A20O43772 301 aa10.49□□□□□ -0.73
MCF2L-207ENST00000397024 C3orf79P0CE67 100 aa10.49□□□□□ -0.73
MCF2L-207ENST00000397024 C5orf52A6NGY3 159 aa10.47□□□□□ -0.73
MCF2L-207ENST00000397024 HINT1P49773 126 aaPredicted RBP10.47□□□□□ -0.73
MCF2L-207ENST00000397024 CBY1Q9Y3M2 126 aa10.46□□□□□ -0.73
MCF2L-207ENST00000397024 SPRR1BP22528 89 aa10.45□□□□□ -0.74
MCF2L-207ENST00000397024 SPANXDQ9BXN6 97 aa10.44□□□□□ -0.74
MCF2L-207ENST00000397024 DHRS4-AS1Q9P1J3 65 aa10.43□□□□□ -0.74
MCF2L-207ENST00000397024 KRTDAPP60985 99 aa10.42□□□□□ -0.74
MCF2L-207ENST00000397024 COA6Q5JTJ3 125 aaKnown RBP10.42□□□□□ -0.74
MCF2L-207ENST00000397024 ELOF1P60002 83 aaKnown RBP10.41□□□□□ -0.74
MCF2L-207ENST00000397024 SEC61BP60468 96 aaKnown RBP10.41□□□□□ -0.74
MCF2L-207ENST00000397024 C6orf99Q4VX62 202 aa10.41□□□□□ -0.74
MCF2L-207ENST00000397024 LINC00518Q8N0U6 118 aa10.41□□□□□ -0.74
MCF2L-207ENST00000397024 COX7BP24311 80 aa10.4□□□□□ -0.74
MCF2L-207ENST00000397024 ANKRD39Q53RE8 183 aa10.4□□□□□ -0.74
MCF2L-207ENST00000397024 XP32Q5T750 250 aa10.4□□□□□ -0.74
MCF2L-207ENST00000397024 HRCT1Q6UXD1 115 aa10.4□□□□□ -0.74
MCF2L-207ENST00000397024 LAMTOR3Q9UHA4 124 aa10.37□□□□□ -0.75
MCF2L-207ENST00000397024 SLC25A34Q6PIV7 304 aa10.36□□□□□ -0.75
MCF2L-207ENST00000397024 SCGB1D4Q6XE38 83 aa10.36□□□□□ -0.75
MCF2L-207ENST00000397024 ATOH7Q8N100 152 aa10.36□□□□□ -0.75
MCF2L-207ENST00000397024 DEFB105AQ8NG35 78 aa10.36□□□□□ -0.75
MCF2L-207ENST00000397024 TAL2Q16559 108 aa10.35□□□□□ -0.75
MCF2L-207ENST00000397024 Q1RN00 199 aa10.35□□□□□ -0.75
MCF2L-207ENST00000397024 PCP2Q8IVA1 136 aa10.34□□□□□ -0.75
MCF2L-207ENST00000397024 TRBV7-6A0A0J9YX20 115 aa10.32□□□□□ -0.76
MCF2L-207ENST00000397024 SMIM29Q86T20 159 aa10.32□□□□□ -0.76
MCF2L-207ENST00000397024 MUSTN1Q8IVN3 82 aa10.32□□□□□ -0.76
MCF2L-207ENST00000397024 C20orf202A1L168 122 aa10.31□□□□□ -0.76
MCF2L-207ENST00000397024 IFITM1P13164 125 aa10.31□□□□□ -0.76
MCF2L-207ENST00000397024 LINC01547P58512 204 aaPredicted RBP10.31□□□□□ -0.76
MCF2L-207ENST00000397024 LIMD2Q9BT23 127 aa10.31□□□□□ -0.76
MCF2L-207ENST00000397024 TEX49A0A1B0GTD5 131 aa10.3□□□□□ -0.76
MCF2L-207ENST00000397024 A6NDN8 102 aa10.3□□□□□ -0.76
MCF2L-207ENST00000397024 A0A0G2JQZ4 141 aa10.28□□□□□ -0.76
MCF2L-207ENST00000397024 Q6ZVH6 145 aa10.28□□□□□ -0.76
MCF2L-207ENST00000397024 PRO1933Q9H354 126 aa10.28□□□□□ -0.76
MCF2L-207ENST00000397024 A0A1B0GWB2 263 aa10.27□□□□□ -0.77
MCF2L-207ENST00000397024 C9orf92A6NGG3 77 aa10.27□□□□□ -0.77
MCF2L-207ENST00000397024 CD164Q04900 197 aa10.27□□□□□ -0.77
MCF2L-207ENST00000397024 COPS9Q8WXC6 57 aa10.27□□□□□ -0.77
MCF2L-207ENST00000397024 IGLV5-48A0A075B6I7 105 aa10.26□□□□□ -0.77
MCF2L-207ENST00000397024 H7C2G1 150 aa10.26□□□□□ -0.77
MCF2L-207ENST00000397024 LCE2CQ5TA81 110 aa10.25□□□□□ -0.77
MCF2L-207ENST00000397024 SMIM11BQ8TCY0 68 aa10.25□□□□□ -0.77
MCF2L-207ENST00000397024 AKR1D1P51857 326 aa10.24□□□□□ -0.77
MCF2L-207ENST00000397024 PCOTHQ58A44 107 aa10.23□□□□□ -0.77
MCF2L-207ENST00000397024 TRAV13-2A0A0B4J235 113 aa10.21□□□□□ -0.77
MCF2L-207ENST00000397024 KRTAP19-2Q3LHN2 52 aa10.21□□□□□ -0.77
MCF2L-207ENST00000397024 C1orf195Q5TG92 126 aa10.21□□□□□ -0.77
MCF2L-207ENST00000397024 Q5XG85 94 aa10.21□□□□□ -0.77
MCF2L-207ENST00000397024 A4D1N5 150 aa10.19□□□□□ -0.78
MCF2L-207ENST00000397024 SNRPEP62304 92 aaKnown RBP10.18□□□□□ -0.78
MCF2L-207ENST00000397024 HIST3H2BBQ8N257 126 aa10.18□□□□□ -0.78
MCF2L-207ENST00000397024 HIST1H2BLQ99880 126 aa10.17□□□□□ -0.78
MCF2L-207ENST00000397024 IGLV8-61A0A075B6I0 122 aa10.16□□□□□ -0.78
MCF2L-207ENST00000397024 KRTAP9-6A0A140TA67 174 aa10.16□□□□□ -0.78
MCF2L-207ENST00000397024 NHP2Q9NX24 153 aaKnown RBP10.15□□□□□ -0.78
MCF2L-207ENST00000397024 LINC00575Q6W349 94 aa10.13□□□□□ -0.79
MCF2L-207ENST00000397024 S100A2P29034 98 aa10.1□□□□□ -0.79
MCF2L-207ENST00000397024 VAMP3Q15836 100 aa10.1□□□□□ -0.79
MCF2L-207ENST00000397024 LCE2DQ5TA82 110 aaPredicted RBP10.09□□□□□ -0.79
MCF2L-207ENST00000397024 hADV29S1A0JD25 119 aa10.08□□□□□ -0.8
MCF2L-207ENST00000397024 HSBP1L1C9JCN9 74 aa10.08□□□□□ -0.8
MCF2L-207ENST00000397024 MT1HP80294 61 aa10.08□□□□□ -0.8
MCF2L-207ENST00000397024 Q6ZQY7 126 aa10.08□□□□□ -0.8
MCF2L-207ENST00000397024 TCL1BO95988 128 aa10.06□□□□□ -0.8
MCF2L-207ENST00000397024 RPL37P61927 97 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms