RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 IGKV4-1P06312 121 aa9.09□□□□□ -0.95
NUP98-204ENST00000397004 M0R378 163 aa9.09□□□□□ -0.95
NUP98-204ENST00000397004 ESRGQ1W209 222 aa9.09□□□□□ -0.95
NUP98-204ENST00000397004 KPRPQ5T749 579 aaPredicted RBP9.09□□□□□ -0.95
NUP98-204ENST00000397004 FBN1P35555 2871 aaKnown RBP9.08□□□□□ -0.96
NUP98-204ENST00000397004 EGFEM1PQ0D2K5 195 aa9.08□□□□□ -0.96
NUP98-204ENST00000397004 DNAH10Q8IVF4 4471 aa9.08□□□□□ -0.96
NUP98-204ENST00000397004 Q6ZTC4 211 aa9.08□□□□□ -0.96
NUP98-204ENST00000397004 FLNBO75369 2602 aaKnown RBP9.08□□□□□ -0.96
NUP98-204ENST00000397004 Q8N377 158 aa9.07□□□□□ -0.96
NUP98-204ENST00000397004 BAHCC1Q9P281 2608 aa9.07□□□□□ -0.96
NUP98-204ENST00000397004 CSMD3Q7Z407 3707 aa9.06□□□□□ -0.96
NUP98-204ENST00000397004 C3orf84H3BNL1 204 aa9.06□□□□□ -0.96
NUP98-204ENST00000397004 MAST4O15021 2626 aa9.06□□□□□ -0.96
NUP98-204ENST00000397004 KRTAP7-1Q8IUC3 87 aa9.06□□□□□ -0.96
NUP98-204ENST00000397004 NREPQ16612 68 aa9.05□□□□□ -0.96
NUP98-204ENST00000397004 LINC00474Q9P2X8 69 aa9.05□□□□□ -0.96
NUP98-204ENST00000397004 SERP1Q9Y6X1 66 aa9.05□□□□□ -0.96
NUP98-204ENST00000397004 FAM168BA1KXE4 195 aa9.04□□□□□ -0.96
NUP98-204ENST00000397004 DEFB105AQ8NG35 78 aa9.04□□□□□ -0.96
NUP98-204ENST00000397004 OCR1Q9BZK8 76 aa9.04□□□□□ -0.96
NUP98-204ENST00000397004 DNAH3Q8TD57 4116 aa9.03□□□□□ -0.96
NUP98-204ENST00000397004 SRRM2Q9UQ35 2752 aaKnown RBP9.03□□□□□ -0.96
NUP98-204ENST00000397004 KRTAP10-11P60412 298 aa9.03□□□□□ -0.96
NUP98-204ENST00000397004 H3BQ85 93 aa9.03□□□□□ -0.96
NUP98-204ENST00000397004 C7orf33Q8WU49 177 aa9.02□□□□□ -0.96
NUP98-204ENST00000397004 Q9BRP9 147 aa9.02□□□□□ -0.96
NUP98-204ENST00000397004 FAM229BQ4G0N7 80 aa9.02□□□□□ -0.97
NUP98-204ENST00000397004 WIPF1O43516 503 aa9.02□□□□□ -0.97
NUP98-204ENST00000397004 OXLD1Q5BKU9 147 aa9.02□□□□□ -0.97
NUP98-204ENST00000397004 CASC10Q5T4H9 136 aa9.02□□□□□ -0.97
NUP98-204ENST00000397004 KCNQ1DNQ9H478 68 aa9.01□□□□□ -0.97
NUP98-204ENST00000397004 TMEM254Q8TBM7 123 aa9.01□□□□□ -0.97
NUP98-204ENST00000397004 F8P00451 2351 aa9.01□□□□□ -0.97
NUP98-204ENST00000397004 KRTAP4-16G5E9R7 235 aaPredicted RBP9.01□□□□□ -0.97
NUP98-204ENST00000397004 LINC00336Q6ZUF6 198 aa9□□□□□ -0.97
NUP98-204ENST00000397004 STAB1Q9NY15 2570 aa9□□□□□ -0.97
NUP98-204ENST00000397004 A0A1W2PNM2 257 aa9□□□□□ -0.97
NUP98-204ENST00000397004 RPL37AP8A6NKH3 93 aa9□□□□□ -0.97
NUP98-204ENST00000397004 ST20-AS1Q8NBB2 130 aa9□□□□□ -0.97
NUP98-204ENST00000397004 IGLV5-48A0A075B6I7 105 aa8.99□□□□□ -0.97
NUP98-204ENST00000397004 NOTCH1P46531 2555 aa8.99□□□□□ -0.97
NUP98-204ENST00000397004 IGKV2D-24A0A075B6R9 120 aa8.98□□□□□ -0.97
NUP98-204ENST00000397004 A0A0U1RQV1 116 aa8.97□□□□□ -0.97
NUP98-204ENST00000397004 DNAH9Q9NYC9 4486 aa8.97□□□□□ -0.97
NUP98-204ENST00000397004 ERC2-IT1O76042 136 aa8.97□□□□□ -0.97
NUP98-204ENST00000397004 TNP2Q05952 138 aa8.97□□□□□ -0.97
NUP98-204ENST00000397004 SYCNQ0VAF6 134 aa8.97□□□□□ -0.97
NUP98-204ENST00000397004 H3BNG1 76 aa8.97□□□□□ -0.97
NUP98-204ENST00000397004 A0A0G2JQZ4 141 aa8.96□□□□□ -0.98
NUP98-204ENST00000397004 A0A1W2PNN7 141 aa8.96□□□□□ -0.98
NUP98-204ENST00000397004 C1orf43Q9BWL3 253 aa8.96□□□□□ -0.98
NUP98-204ENST00000397004 HIGD2AQ9BW72 106 aa8.96□□□□□ -0.98
NUP98-204ENST00000397004 KRTAP24-1Q3LI83 254 aa8.95□□□□□ -0.98
NUP98-204ENST00000397004 LINC01556Q5JQF7 62 aa8.94□□□□□ -0.98
NUP98-204ENST00000397004 Q6ZRX8 168 aa8.93□□□□□ -0.98
NUP98-204ENST00000397004 SMIM29Q86T20 159 aa8.93□□□□□ -0.98
NUP98-204ENST00000397004 HUWE1Q7Z6Z7 4374 aaKnown RBP8.92□□□□□ -0.98
NUP98-204ENST00000397004 IGLV1-50A0A075B6I6 118 aa8.92□□□□□ -0.98
NUP98-204ENST00000397004 SPRR1AP35321 89 aa8.92□□□□□ -0.98
NUP98-204ENST00000397004 NBEAL1Q6ZS30 2694 aa8.92□□□□□ -0.98
NUP98-204ENST00000397004 FAM30AQ9NZY2 134 aa8.91□□□□□ -0.98
NUP98-204ENST00000397004 DSCR10P59022 87 aa8.91□□□□□ -0.98
NUP98-204ENST00000397004 NKAPP1Q8N9T2 125 aa8.91□□□□□ -0.98
NUP98-204ENST00000397004 SMIM26A0A096LP01 95 aa8.9□□□□□ -0.98
NUP98-204ENST00000397004 PRYO14603 147 aa8.9□□□□□ -0.99
NUP98-204ENST00000397004 NDUFC1O43677 76 aa8.9□□□□□ -0.99
NUP98-204ENST00000397004 DNAH7Q8WXX0 4024 aa8.89□□□□□ -0.99
NUP98-204ENST00000397004 DEFB131BA0A096LNP1 70 aa8.89□□□□□ -0.99
NUP98-204ENST00000397004 COL6A5A8TX70 2615 aa8.88□□□□□ -0.99
NUP98-204ENST00000397004 C1orf137Q5JT78 98 aa8.88□□□□□ -0.99
NUP98-204ENST00000397004 TLX1NBP0CAT3 122 aa8.87□□□□□ -0.99
NUP98-204ENST00000397004 COL7A1Q02388 2944 aa8.87□□□□□ -0.99
NUP98-204ENST00000397004 DNAH10OSP0CZ25 163 aa8.87□□□□□ -0.99
NUP98-204ENST00000397004 K7EQZ3 153 aa8.87□□□□□ -0.99
NUP98-204ENST00000397004 LCE6AA0A183 80 aa8.86□□□□□ -0.99
NUP98-204ENST00000397004 Q8NBF4 154 aa8.86□□□□□ -0.99
NUP98-204ENST00000397004 PLA2G2DQ9UNK4 145 aa8.86□□□□□ -0.99
NUP98-204ENST00000397004 SPRR4Q96PI1 79 aa8.85□□□□□ -0.99
NUP98-204ENST00000397004 LINC00588Q9Y4M8 146 aa8.85□□□□□ -0.99
NUP98-204ENST00000397004 IGLV5-37A0A075B6J1 123 aa8.84□□□□□ -0.99
NUP98-204ENST00000397004 DHRS4-AS1Q9P1J3 65 aa8.84□□□□□ -0.99
NUP98-204ENST00000397004 MPLKIPQ8TAP9 179 aa8.83□□□□□ -1
NUP98-204ENST00000397004 C11orf45Q8TAV5 145 aa8.83□□□□□ -1
NUP98-204ENST00000397004 DEFB116Q30KQ4 102 aa8.82□□□□□ -1
NUP98-204ENST00000397004 ZCCHC13Q8WW36 166 aaKnown RBP8.82□□□□□ -1
NUP98-204ENST00000397004 TENM2Q9NT68 2774 aa8.82□□□□□ -1
NUP98-204ENST00000397004 F8WDY8 70 aa8.82□□□□□ -1
NUP98-204ENST00000397004 FUSP35637 526 aaKnown RBP eCLIP8.82□□□□□ -1
NUP98-204ENST00000397004 PRO0628Q9UI54 55 aa8.81□□□□□ -1
NUP98-204ENST00000397004 ETDCA0A1B0GVM5 59 aa8.81□□□□□ -1
NUP98-204ENST00000397004 MRPL55Q7Z7F7 128 aaKnown RBP8.8□□□□□ -1
NUP98-204ENST00000397004 ATP5EP56381 51 aaPredicted RBP8.8□□□□□ -1
NUP98-204ENST00000397004 MRAPQ8TCY5 172 aa8.8□□□□□ -1
NUP98-204ENST00000397004 LRCOL1A6NCL2 159 aa8.79□□□□□ -1
NUP98-204ENST00000397004 LINC00476Q8WZB0 136 aa8.79□□□□□ -1
NUP98-204ENST00000397004 KRTAP11-1Q8IUC1 163 aa8.78□□□□□ -1
NUP98-204ENST00000397004 PRB2P02812 416 aaPredicted RBP8.78□□□□□ -1
NUP98-204ENST00000397004 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.77□□□□□ -1
NUP98-204ENST00000397004 IGFL1Q6UW32 110 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 211.8 ms