RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 F8W1H4 67 aa8.64□□□□□ -1.03
VAPB-202ENST00000395802 LST1O00453 97 aa8.64□□□□□ -1.03
VAPB-202ENST00000395802 UBE2BP63146 152 aa8.64□□□□□ -1.03
VAPB-202ENST00000395802 MTURNQ8N3F0 131 aa8.64□□□□□ -1.03
VAPB-202ENST00000395802 H0YGX0 51 aa8.64□□□□□ -1.03
VAPB-202ENST00000395802 PANO1I0J062 215 aa8.64□□□□□ -1.03
VAPB-202ENST00000395802 PRYO14603 147 aa8.64□□□□□ -1.03
VAPB-202ENST00000395802 ZNF73O43830 326 aaPredicted RBP8.64□□□□□ -1.03
VAPB-202ENST00000395802 Q6ZSA8 131 aa8.64□□□□□ -1.03
VAPB-202ENST00000395802 DIRC1Q969H9 104 aa8.64□□□□□ -1.03
VAPB-202ENST00000395802 SNCGO76070 127 aa8.63□□□□□ -1.03
VAPB-202ENST00000395802 TRBV7-6A0A0J9YX20 115 aa8.62□□□□□ -1.03
VAPB-202ENST00000395802 RPL37AP8A6NKH3 93 aa8.62□□□□□ -1.03
VAPB-202ENST00000395802 KRTAP10-1P60331 282 aa8.62□□□□□ -1.03
VAPB-202ENST00000395802 SMCPP49901 116 aaPredicted RBP8.61□□□□□ -1.03
VAPB-202ENST00000395802 C6orf99Q4VX62 202 aa8.61□□□□□ -1.03
VAPB-202ENST00000395802 FAM218AQ96MZ4 157 aa8.61□□□□□ -1.03
VAPB-202ENST00000395802 PHF5AQ7RTV0 110 aaKnown RBP8.61□□□□□ -1.03
VAPB-202ENST00000395802 RYR3Q15413 4870 aa8.6□□□□□ -1.03
VAPB-202ENST00000395802 C9JAW5 83 aa8.6□□□□□ -1.03
VAPB-202ENST00000395802 REG3GQ6UW15 175 aa8.59□□□□□ -1.03
VAPB-202ENST00000395802 SLC25A20O43772 301 aa8.58□□□□□ -1.04
VAPB-202ENST00000395802 TRACP01848 142 aa8.58□□□□□ -1.04
VAPB-202ENST00000395802 CIRBP-AS1Q8TBR5 109 aa8.58□□□□□ -1.04
VAPB-202ENST00000395802 ETDCA0A1B0GVM5 59 aa8.57□□□□□ -1.04
VAPB-202ENST00000395802 SPRR1AP35321 89 aa8.57□□□□□ -1.04
VAPB-202ENST00000395802 FAM30AQ9NZY2 134 aa8.57□□□□□ -1.04
VAPB-202ENST00000395802 PKHD1P08F94 4074 aa8.57□□□□□ -1.04
VAPB-202ENST00000395802 A0A1B0GX51 115 aa8.57□□□□□ -1.04
VAPB-202ENST00000395802 COX7BP24311 80 aa8.57□□□□□ -1.04
VAPB-202ENST00000395802 SCXQ7RTU7 201 aa8.57□□□□□ -1.04
VAPB-202ENST00000395802 LINC01600Q96MT4 127 aa8.57□□□□□ -1.04
VAPB-202ENST00000395802 DNAH8Q96JB1 4490 aa8.56□□□□□ -1.04
VAPB-202ENST00000395802 ELOF1P60002 83 aaKnown RBP8.56□□□□□ -1.04
VAPB-202ENST00000395802 ETDBQ3ZM63 59 aa8.55□□□□□ -1.04
VAPB-202ENST00000395802 ANKRD29Q8N6D5 301 aa8.54□□□□□ -1.04
VAPB-202ENST00000395802 H3BT86 120 aa8.54□□□□□ -1.04
VAPB-202ENST00000395802 DNAL4O96015 105 aa8.54□□□□□ -1.04
VAPB-202ENST00000395802 INAFM2P0DMQ5 153 aa8.54□□□□□ -1.04
VAPB-202ENST00000395802 GHRHP01286 108 aa8.53□□□□□ -1.04
VAPB-202ENST00000395802 OCIAD2Q56VL3 154 aa8.53□□□□□ -1.04
VAPB-202ENST00000395802 Q6ZRX8 168 aa8.53□□□□□ -1.04
VAPB-202ENST00000395802 DHRS4-AS1Q9P1J3 65 aa8.53□□□□□ -1.04
VAPB-202ENST00000395802 KRTAP4-16G5E9R7 235 aaPredicted RBP8.52□□□□□ -1.04
VAPB-202ENST00000395802 H0Y9J4 135 aa8.52□□□□□ -1.05
VAPB-202ENST00000395802 BCE1O60756 84 aa8.52□□□□□ -1.05
VAPB-202ENST00000395802 LINC00575Q6W349 94 aa8.52□□□□□ -1.05
VAPB-202ENST00000395802 FAM19A1Q7Z5A9 133 aa8.52□□□□□ -1.05
VAPB-202ENST00000395802 TEN1Q86WV5 123 aa8.52□□□□□ -1.05
VAPB-202ENST00000395802 LRP1BQ9NZR2 4599 aa8.51□□□□□ -1.05
VAPB-202ENST00000395802 hADV29S1A0JD25 119 aa8.51□□□□□ -1.05
VAPB-202ENST00000395802 B5MCH6 92 aa8.51□□□□□ -1.05
VAPB-202ENST00000395802 LINC00528Q8N1L1 170 aa8.51□□□□□ -1.05
VAPB-202ENST00000395802 UBE2AP49459 152 aa8.5□□□□□ -1.05
VAPB-202ENST00000395802 PSORS1C2Q9UIG4 136 aa8.49□□□□□ -1.05
VAPB-202ENST00000395802 H3BQ85 93 aa8.48□□□□□ -1.05
VAPB-202ENST00000395802 K7ERU9 68 aa8.48□□□□□ -1.05
VAPB-202ENST00000395802 C1orf137Q5JT78 98 aa8.48□□□□□ -1.05
VAPB-202ENST00000395802 BAALC-AS2P0C853 105 aa8.47□□□□□ -1.05
VAPB-202ENST00000395802 KRTAP11-1Q8IUC1 163 aa8.47□□□□□ -1.05
VAPB-202ENST00000395802 DYNC1H1Q14204 4646 aaKnown RBP8.47□□□□□ -1.05
VAPB-202ENST00000395802 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.46□□□□□ -1.06
VAPB-202ENST00000395802 ORMDL1Q9P0S3 153 aa8.45□□□□□ -1.06
VAPB-202ENST00000395802 XGP55808 180 aa8.45□□□□□ -1.06
VAPB-202ENST00000395802 PRLHP81277 87 aa8.45□□□□□ -1.06
VAPB-202ENST00000395802 PPDPFLQ8WWR9 84 aa8.45□□□□□ -1.06
VAPB-202ENST00000395802 TEX49A0A1B0GTD5 131 aa8.44□□□□□ -1.06
VAPB-202ENST00000395802 PCP4P48539 62 aa8.44□□□□□ -1.06
VAPB-202ENST00000395802 HAMPP81172 84 aa8.44□□□□□ -1.06
VAPB-202ENST00000395802 CDK2AP2O75956 126 aa8.43□□□□□ -1.06
VAPB-202ENST00000395802 Q9BRP9 147 aa8.43□□□□□ -1.06
VAPB-202ENST00000395802 HIGD2AQ9BW72 106 aa8.43□□□□□ -1.06
VAPB-202ENST00000395802 TMEM256-PLSCR3K7ERE1 68 aa8.43□□□□□ -1.06
VAPB-202ENST00000395802 ZNF861PO60384 105 aa8.43□□□□□ -1.06
VAPB-202ENST00000395802 Q6ZQY7 126 aa8.43□□□□□ -1.06
VAPB-202ENST00000395802 IGLV7-43P04211 117 aa8.42□□□□□ -1.06
VAPB-202ENST00000395802 SMCR5Q8TEV8 140 aa8.42□□□□□ -1.06
VAPB-202ENST00000395802 KRTAP13-1Q8IUC0 172 aa8.41□□□□□ -1.06
VAPB-202ENST00000395802 VPS25Q9BRG1 176 aa8.4□□□□□ -1.06
VAPB-202ENST00000395802 ZNF706Q9Y5V0 76 aaPredicted RBP8.4□□□□□ -1.07
VAPB-202ENST00000395802 J3QR89 54 aa8.39□□□□□ -1.07
VAPB-202ENST00000395802 RPL37AP61513 92 aaKnown RBP8.38□□□□□ -1.07
VAPB-202ENST00000395802 APOBP04114 4563 aaKnown RBP8.38□□□□□ -1.07
VAPB-202ENST00000395802 OBSCN-AS1Q96MR7 158 aa8.37□□□□□ -1.07
VAPB-202ENST00000395802 IGLV5-48A0A075B6I7 105 aa8.36□□□□□ -1.07
VAPB-202ENST00000395802 FAM229AH3BQW9 127 aa8.36□□□□□ -1.07
VAPB-202ENST00000395802 ERC2-IT1O76042 136 aa8.36□□□□□ -1.07
VAPB-202ENST00000395802 SMR3BP02814 79 aaPredicted RBP8.35□□□□□ -1.07
VAPB-202ENST00000395802 SVIPQ8NHG7 77 aa8.35□□□□□ -1.07
VAPB-202ENST00000395802 VPS13BQ7Z7G8 4022 aa8.35□□□□□ -1.07
VAPB-202ENST00000395802 PLA2G1BP04054 148 aaKnown RBP8.34□□□□□ -1.07
VAPB-202ENST00000395802 C21orf62-AS1Q17RA5 79 aa8.34□□□□□ -1.07
VAPB-202ENST00000395802 DEFB105AQ8NG35 78 aa8.34□□□□□ -1.07
VAPB-202ENST00000395802 ST20-AS1Q8NBB2 130 aa8.33□□□□□ -1.08
VAPB-202ENST00000395802 LAMTOR3Q9UHA4 124 aa8.33□□□□□ -1.08
VAPB-202ENST00000395802 JMJD7-PLA2G4BH0Y9G9 81 aa8.32□□□□□ -1.08
VAPB-202ENST00000395802 SPINK6Q6UWN8 80 aa8.31□□□□□ -1.08
VAPB-202ENST00000395802 Q8N377 158 aa8.31□□□□□ -1.08
VAPB-202ENST00000395802 SPRR1BP22528 89 aa8.31□□□□□ -1.08
VAPB-202ENST00000395802 LINC01547P58512 204 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms