RNA–Protein interactions for RNA: ENST00000395397.7

NR1H3-201, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-201ENST00000395397 TENM3Q9P273 2699 aa8.76□□□□□ -1.01
NR1H3-201ENST00000395397 DNAH3Q8TD57 4116 aa8.76□□□□□ -1.01
NR1H3-201ENST00000395397 IGKV3D-7A0A0C4DH55 119 aa8.75□□□□□ -1.01
NR1H3-201ENST00000395397 COX7CP15954 63 aa8.75□□□□□ -1.01
NR1H3-201ENST00000395397 BCE1O60756 84 aa8.75□□□□□ -1.01
NR1H3-201ENST00000395397 USP17L23D6RBM5 183 aa8.74□□□□□ -1.01
NR1H3-201ENST00000395397 BIRC6Q9NR09 4857 aa8.73□□□□□ -1.01
NR1H3-201ENST00000395397 SPRR1AP35321 89 aa8.73□□□□□ -1.01
NR1H3-201ENST00000395397 NKAPP1Q8N9T2 125 aa8.73□□□□□ -1.01
NR1H3-201ENST00000395397 C7orf33Q8WU49 177 aa8.73□□□□□ -1.01
NR1H3-201ENST00000395397 KRTAP4-16G5E9R7 235 aaPredicted RBP8.72□□□□□ -1.01
NR1H3-201ENST00000395397 KRTAP17-1Q9BYP8 105 aa8.72□□□□□ -1.01
NR1H3-201ENST00000395397 PRYO14603 147 aa8.71□□□□□ -1.01
NR1H3-201ENST00000395397 CRYGAP11844 174 aa8.71□□□□□ -1.01
NR1H3-201ENST00000395397 SERTAD4-AS1Q5TG53 156 aa8.71□□□□□ -1.01
NR1H3-201ENST00000395397 DHRS4-AS1Q9P1J3 65 aa8.71□□□□□ -1.01
NR1H3-201ENST00000395397 EPPK1P58107 5090 aaKnown RBP8.7□□□□□ -1.02
NR1H3-201ENST00000395397 IGLV1-50A0A075B6I6 118 aa8.7□□□□□ -1.02
NR1H3-201ENST00000395397 A0A1B0GW54 56 aa8.7□□□□□ -1.02
NR1H3-201ENST00000395397 CXCL6P80162 114 aa8.7□□□□□ -1.02
NR1H3-201ENST00000395397 SERP2Q8N6R1 65 aa8.7□□□□□ -1.02
NR1H3-201ENST00000395397 LOC107984640A0A0U1RRK4 108 aa8.69□□□□□ -1.02
NR1H3-201ENST00000395397 Q6ZVQ6 151 aa8.69□□□□□ -1.02
NR1H3-201ENST00000395397 WWC2-AS2Q96NR7 200 aa8.68□□□□□ -1.02
NR1H3-201ENST00000395397 IGLV5-48A0A075B6I7 105 aa8.67□□□□□ -1.02
NR1H3-201ENST00000395397 M0R2N4 97 aa8.67□□□□□ -1.02
NR1H3-201ENST00000395397 LINC01547P58512 204 aaPredicted RBP8.67□□□□□ -1.02
NR1H3-201ENST00000395397 CASC10Q5T4H9 136 aa8.67□□□□□ -1.02
NR1H3-201ENST00000395397 Q6ZRX8 168 aa8.67□□□□□ -1.02
NR1H3-201ENST00000395397 COL7A1Q02388 2944 aa8.66□□□□□ -1.02
NR1H3-201ENST00000395397 A0A087WVE0 104 aa8.66□□□□□ -1.02
NR1H3-201ENST00000395397 C9orf153Q5TBE3 101 aa8.66□□□□□ -1.02
NR1H3-201ENST00000395397 KRTAP7-1Q8IUC3 87 aa8.66□□□□□ -1.02
NR1H3-201ENST00000395397 SS18L2Q9UHA2 77 aa8.66□□□□□ -1.02
NR1H3-201ENST00000395397 CNBPP62633 177 aaKnown RBP8.64□□□□□ -1.03
NR1H3-201ENST00000395397 FAM19A1Q7Z5A9 133 aa8.64□□□□□ -1.03
NR1H3-201ENST00000395397 Q8N377 158 aa8.64□□□□□ -1.03
NR1H3-201ENST00000395397 MRPL55Q7Z7F7 128 aaKnown RBP8.62□□□□□ -1.03
NR1H3-201ENST00000395397 SMIM20Q8N5G0 67 aa8.62□□□□□ -1.03
NR1H3-201ENST00000395397 APLNQ9ULZ1 77 aa8.62□□□□□ -1.03
NR1H3-201ENST00000395397 ETDCA0A1B0GVM5 59 aa8.6□□□□□ -1.03
NR1H3-201ENST00000395397 HAMPP81172 84 aa8.6□□□□□ -1.03
NR1H3-201ENST00000395397 TNP2Q05952 138 aa8.6□□□□□ -1.03
NR1H3-201ENST00000395397 Q9BRP9 147 aa8.6□□□□□ -1.03
NR1H3-201ENST00000395397 RYR2Q92736 4967 aa8.6□□□□□ -1.03
NR1H3-201ENST00000395397 FAM168BA1KXE4 195 aa8.59□□□□□ -1.03
NR1H3-201ENST00000395397 C16orf90A8MZG2 172 aa8.59□□□□□ -1.03
NR1H3-201ENST00000395397 C14orf177Q52M58 125 aa8.59□□□□□ -1.03
NR1H3-201ENST00000395397 B9D2Q9BPU9 175 aa8.59□□□□□ -1.03
NR1H3-201ENST00000395397 RPL37AP8A6NKH3 93 aa8.57□□□□□ -1.04
NR1H3-201ENST00000395397 KRTAP1-5Q9BYS1 174 aa8.57□□□□□ -1.04
NR1H3-201ENST00000395397 DNAH9Q9NYC9 4486 aa8.57□□□□□ -1.04
NR1H3-201ENST00000395397 TRAV7A0A075B6U4 112 aa8.56□□□□□ -1.04
NR1H3-201ENST00000395397 REG3GQ6UW15 175 aa8.56□□□□□ -1.04
NR1H3-201ENST00000395397 PKIGQ9Y2B9 76 aa8.55□□□□□ -1.04
NR1H3-201ENST00000395397 DYNC2H1Q8NCM8 4307 aaKnown RBP8.55□□□□□ -1.04
NR1H3-201ENST00000395397 HUWE1Q7Z6Z7 4374 aaKnown RBP8.55□□□□□ -1.04
NR1H3-201ENST00000395397 TENM2Q9NT68 2774 aa8.55□□□□□ -1.04
NR1H3-201ENST00000395397 C3orf84H3BNL1 204 aa8.54□□□□□ -1.04
NR1H3-201ENST00000395397 RPS28P62857 69 aaKnown RBP8.54□□□□□ -1.04
NR1H3-201ENST00000395397 NREPQ16612 68 aa8.54□□□□□ -1.04
NR1H3-201ENST00000395397 SPRR4Q96PI1 79 aa8.54□□□□□ -1.04
NR1H3-201ENST00000395397 TMEM258P61165 79 aa8.53□□□□□ -1.04
NR1H3-201ENST00000395397 FAM19A5Q7Z5A7 132 aaPredicted RBP8.53□□□□□ -1.04
NR1H3-201ENST00000395397 FUSP35637 526 aaKnown RBP eCLIP8.52□□□□□ -1.05
NR1H3-201ENST00000395397 DEFB105AQ8NG35 78 aa8.52□□□□□ -1.05
NR1H3-201ENST00000395397 DNAH1Q9P2D7 4330 aa8.52□□□□□ -1.05
NR1H3-201ENST00000395397 A0A096LNI7 61 aa8.51□□□□□ -1.05
NR1H3-201ENST00000395397 H0Y9J4 135 aa8.51□□□□□ -1.05
NR1H3-201ENST00000395397 UBE2DNLQ8IWF7 75 aa8.51□□□□□ -1.05
NR1H3-201ENST00000395397 IGLV8-61A0A075B6I0 122 aa8.5□□□□□ -1.05
NR1H3-201ENST00000395397 A0A1W2PNM2 257 aa8.5□□□□□ -1.05
NR1H3-201ENST00000395397 PSCAO43653 123 aa8.5□□□□□ -1.05
NR1H3-201ENST00000395397 ERC2-IT1O76042 136 aa8.5□□□□□ -1.05
NR1H3-201ENST00000395397 C1orf137Q5JT78 98 aa8.5□□□□□ -1.05
NR1H3-201ENST00000395397 SMIM29Q86T20 159 aa8.5□□□□□ -1.05
NR1H3-201ENST00000395397 Q8NBF4 154 aa8.5□□□□□ -1.05
NR1H3-201ENST00000395397 C9orf163Q8N9P6 203 aa8.49□□□□□ -1.05
NR1H3-201ENST00000395397 SACSQ9NZJ4 4579 aa8.49□□□□□ -1.05
NR1H3-201ENST00000395397 A0A1W2PNN7 141 aa8.49□□□□□ -1.05
NR1H3-201ENST00000395397 NUPR2A6NF83 97 aa8.49□□□□□ -1.05
NR1H3-201ENST00000395397 ST20-AS1Q8NBB2 130 aa8.49□□□□□ -1.05
NR1H3-201ENST00000395397 LRCOL1A6NCL2 159 aa8.48□□□□□ -1.05
NR1H3-201ENST00000395397 UBE2BP63146 152 aa8.48□□□□□ -1.05
NR1H3-201ENST00000395397 CYSTM1Q9H1C7 97 aa8.48□□□□□ -1.05
NR1H3-201ENST00000395397 BPY2O14599 106 aa8.47□□□□□ -1.05
NR1H3-201ENST00000395397 IGKV4-1P06312 121 aa8.47□□□□□ -1.05
NR1H3-201ENST00000395397 KLKP1Q107X0 134 aa8.47□□□□□ -1.05
NR1H3-201ENST00000395397 NBDYA0A0U1RRE5 68 aa8.46□□□□□ -1.05
NR1H3-201ENST00000395397 LCE6AA0A183 80 aa8.46□□□□□ -1.05
NR1H3-201ENST00000395397 SPRR1BP22528 89 aa8.46□□□□□ -1.05
NR1H3-201ENST00000395397 LINC00474Q9P2X8 69 aa8.46□□□□□ -1.05
NR1H3-201ENST00000395397 EPM2AB3EWF7 344 aa8.45□□□□□ -1.06
NR1H3-201ENST00000395397 Q6ZRN7 208 aaPredicted RBP8.45□□□□□ -1.06
NR1H3-201ENST00000395397 SCXQ7RTU7 201 aa8.43□□□□□ -1.06
NR1H3-201ENST00000395397 STAB2Q8WWQ8 2551 aa8.42□□□□□ -1.06
NR1H3-201ENST00000395397 F8WEM9 126 aa8.42□□□□□ -1.06
NR1H3-201ENST00000395397 C20orf197Q8N268 126 aa8.42□□□□□ -1.06
NR1H3-201ENST00000395397 IGKV2-24A0A0C4DH68 120 aa8.41□□□□□ -1.06
NR1H3-201ENST00000395397 J3KT08 172 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms