RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 C10orf25Q5T742 122 aa12.51□□□□□ -0.41
HOXC6-202ENST00000394331 UNQ6190/PRO20217Q6UXQ8 127 aa12.51□□□□□ -0.41
HOXC6-202ENST00000394331 SMIM29Q86T20 159 aa12.51□□□□□ -0.41
HOXC6-202ENST00000394331 SPAG11BQ08648 103 aa12.5□□□□□ -0.41
HOXC6-202ENST00000394331 Q8NAQ8 132 aa12.49□□□□□ -0.41
HOXC6-202ENST00000394331 FASNP49327 2511 aaKnown RBP12.49□□□□□ -0.41
HOXC6-202ENST00000394331 HELZ2Q9BYK8 2649 aaKnown RBP12.49□□□□□ -0.41
HOXC6-202ENST00000394331 SPART-AS1P0CW21 52 aa12.48□□□□□ -0.41
HOXC6-202ENST00000394331 FAM30AQ9NZY2 134 aa12.48□□□□□ -0.41
HOXC6-202ENST00000394331 IGLV10-54A0A075B6I4 117 aa12.48□□□□□ -0.41
HOXC6-202ENST00000394331 PSPHP1O15172 72 aa12.48□□□□□ -0.41
HOXC6-202ENST00000394331 LINC00528Q8N1L1 170 aa12.48□□□□□ -0.41
HOXC6-202ENST00000394331 PSCAO43653 123 aa12.47□□□□□ -0.41
HOXC6-202ENST00000394331 CYSRT1A8MQ03 144 aa12.46□□□□□ -0.42
HOXC6-202ENST00000394331 LRCOL1A6NCL2 159 aa12.45□□□□□ -0.42
HOXC6-202ENST00000394331 LELP1Q5T871 98 aa12.45□□□□□ -0.42
HOXC6-202ENST00000394331 UBE2BP63146 152 aa12.45□□□□□ -0.42
HOXC6-202ENST00000394331 ETDCA0A1B0GVM5 59 aa12.44□□□□□ -0.42
HOXC6-202ENST00000394331 SYCNQ0VAF6 134 aa12.44□□□□□ -0.42
HOXC6-202ENST00000394331 KLK12Q9UKR0 248 aa12.44□□□□□ -0.42
HOXC6-202ENST00000394331 NDUFB1O75438 58 aa12.43□□□□□ -0.42
HOXC6-202ENST00000394331 HTN3P15516 51 aa12.42□□□□□ -0.42
HOXC6-202ENST00000394331 IGLV5-48A0A075B6I7 105 aa12.42□□□□□ -0.42
HOXC6-202ENST00000394331 GCN1Q92616 2671 aaKnown RBP12.41□□□□□ -0.42
HOXC6-202ENST00000394331 C3orf84H3BNL1 204 aa12.4□□□□□ -0.42
HOXC6-202ENST00000394331 KTN1-AS1Q86SY8 53 aa12.4□□□□□ -0.42
HOXC6-202ENST00000394331 MRPL55Q7Z7F7 128 aaKnown RBP12.4□□□□□ -0.42
HOXC6-202ENST00000394331 KMT2BQ9UMN6 2715 aaPredicted RBP12.39□□□□□ -0.43
HOXC6-202ENST00000394331 M0R378 163 aa12.39□□□□□ -0.43
HOXC6-202ENST00000394331 VPREB1P12018 145 aa12.39□□□□□ -0.43
HOXC6-202ENST00000394331 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.39□□□□□ -0.43
HOXC6-202ENST00000394331 Q5VV11 94 aa12.39□□□□□ -0.43
HOXC6-202ENST00000394331 RETNQ9HD89 108 aa12.38□□□□□ -0.43
HOXC6-202ENST00000394331 PRR34Q9NV39 138 aa12.38□□□□□ -0.43
HOXC6-202ENST00000394331 A8MUN3 132 aa12.38□□□□□ -0.43
HOXC6-202ENST00000394331 NBEAL2Q6ZNJ1 2754 aa12.38□□□□□ -0.43
HOXC6-202ENST00000394331 UBE2AP49459 152 aa12.38□□□□□ -0.43
HOXC6-202ENST00000394331 C6orf48Q9UBA6 75 aa12.38□□□□□ -0.43
HOXC6-202ENST00000394331 LINC00588Q9Y4M8 146 aa12.38□□□□□ -0.43
HOXC6-202ENST00000394331 KPRPQ5T749 579 aaPredicted RBP12.35□□□□□ -0.43
HOXC6-202ENST00000394331 XAGE1AQ9HD64 81 aa12.34□□□□□ -0.43
HOXC6-202ENST00000394331 LIMD2Q9BT23 127 aa12.34□□□□□ -0.43
HOXC6-202ENST00000394331 NOTCH2Q04721 2471 aa12.33□□□□□ -0.44
HOXC6-202ENST00000394331 VWFP04275 2813 aa12.31□□□□□ -0.44
HOXC6-202ENST00000394331 DSCR10P59022 87 aa12.29□□□□□ -0.44
HOXC6-202ENST00000394331 Q8N377 158 aa12.29□□□□□ -0.44
HOXC6-202ENST00000394331 SPANXA2-OT1Q8N9U9 137 aa12.29□□□□□ -0.44
HOXC6-202ENST00000394331 HECTD1Q9ULT8 2610 aa12.28□□□□□ -0.44
HOXC6-202ENST00000394331 H3BNG1 76 aa12.28□□□□□ -0.44
HOXC6-202ENST00000394331 NDUFS5O43920 106 aa12.28□□□□□ -0.44
HOXC6-202ENST00000394331 RBM12B-AS1Q9P1G2 102 aa12.28□□□□□ -0.44
HOXC6-202ENST00000394331 A0A1W2PNM2 257 aa12.28□□□□□ -0.44
HOXC6-202ENST00000394331 SPRR4Q96PI1 79 aa12.28□□□□□ -0.44
HOXC6-202ENST00000394331 B9D2Q9BPU9 175 aa12.28□□□□□ -0.44
HOXC6-202ENST00000394331 ATP11AUNQ6ZP68 121 aa12.27□□□□□ -0.44
HOXC6-202ENST00000394331 ST20-AS1Q8NBB2 130 aa12.27□□□□□ -0.45
HOXC6-202ENST00000394331 NSD1Q96L73 2696 aaPredicted RBP12.27□□□□□ -0.45
HOXC6-202ENST00000394331 C16orf90A8MZG2 172 aa12.27□□□□□ -0.45
HOXC6-202ENST00000394331 Q9BRP9 147 aa12.27□□□□□ -0.45
HOXC6-202ENST00000394331 KCNQ1DNQ9H478 68 aa12.27□□□□□ -0.45
HOXC6-202ENST00000394331 EGFEM1PQ0D2K5 195 aa12.26□□□□□ -0.45
HOXC6-202ENST00000394331 Q8NBF4 154 aa12.26□□□□□ -0.45
HOXC6-202ENST00000394331 TNP2Q05952 138 aa12.26□□□□□ -0.45
HOXC6-202ENST00000394331 Q8N9P0 234 aaPredicted RBP12.26□□□□□ -0.45
HOXC6-202ENST00000394331 HCG22E2RYF7 251 aa12.25□□□□□ -0.45
HOXC6-202ENST00000394331 OTOGQ6ZRI0 2925 aa12.25□□□□□ -0.45
HOXC6-202ENST00000394331 A8MU10 97 aa12.24□□□□□ -0.45
HOXC6-202ENST00000394331 PHF5AQ7RTV0 110 aaKnown RBP12.24□□□□□ -0.45
HOXC6-202ENST00000394331 CHKB-CPT1BH3BT56 60 aa12.23□□□□□ -0.45
HOXC6-202ENST00000394331 K7EQZ3 153 aa12.23□□□□□ -0.45
HOXC6-202ENST00000394331 MP68P56378 58 aa12.22□□□□□ -0.45
HOXC6-202ENST00000394331 Q75L30 129 aa12.22□□□□□ -0.45
HOXC6-202ENST00000394331 PRR4Q16378 134 aa12.21□□□□□ -0.45
HOXC6-202ENST00000394331 WFDC10BQ8IUB3 73 aa12.21□□□□□ -0.45
HOXC6-202ENST00000394331 H3BPC8 53 aa12.2□□□□□ -0.46
HOXC6-202ENST00000394331 C1orf137Q5JT78 98 aa12.2□□□□□ -0.46
HOXC6-202ENST00000394331 TENM1Q9UKZ4 2725 aa12.2□□□□□ -0.46
HOXC6-202ENST00000394331 LINC00208Q96KT6 92 aa12.2□□□□□ -0.46
HOXC6-202ENST00000394331 C4orf48Q5BLP8 95 aa12.19□□□□□ -0.46
HOXC6-202ENST00000394331 DHRS4-AS1Q9P1J3 65 aa12.19□□□□□ -0.46
HOXC6-202ENST00000394331 ATRQ13535 2644 aa12.19□□□□□ -0.46
HOXC6-202ENST00000394331 A6NN06 94 aa12.19□□□□□ -0.46
HOXC6-202ENST00000394331 CAMK2N2Q96S95 79 aa12.18□□□□□ -0.46
HOXC6-202ENST00000394331 LOC101927531A0A1B0GV80 90 aa12.18□□□□□ -0.46
HOXC6-202ENST00000394331 KRTAP10-11P60412 298 aa12.17□□□□□ -0.46
HOXC6-202ENST00000394331 TEP1Q99973 2627 aaKnown RBP12.17□□□□□ -0.46
HOXC6-202ENST00000394331 KRTAP26-1Q6PEX3 210 aa12.16□□□□□ -0.46
HOXC6-202ENST00000394331 DEFB105AQ8NG35 78 aa12.16□□□□□ -0.46
HOXC6-202ENST00000394331 PRR15LQ9BU68 103 aa12.15□□□□□ -0.46
HOXC6-202ENST00000394331 LCA10Q71F78 164 aa12.14□□□□□ -0.47
HOXC6-202ENST00000394331 HIVEP1P15822 2718 aa12.13□□□□□ -0.47
HOXC6-202ENST00000394331 Q6ZRX8 168 aa12.1□□□□□ -0.47
HOXC6-202ENST00000394331 C15orf56Q8N910 161 aa12.1□□□□□ -0.47
HOXC6-202ENST00000394331 CDC42SE1Q9NRR8 79 aa12.1□□□□□ -0.47
HOXC6-202ENST00000394331 LINC01556Q5JQF7 62 aa12.1□□□□□ -0.47
HOXC6-202ENST00000394331 SPTSSBQ8NFR3 76 aa12.09□□□□□ -0.47
HOXC6-202ENST00000394331 DEFB131BA0A096LNP1 70 aa12.08□□□□□ -0.48
HOXC6-202ENST00000394331 C7orf65Q6ZTY9 151 aa12.07□□□□□ -0.48
HOXC6-202ENST00000394331 IGKV2D-24A0A075B6R9 120 aa12.06□□□□□ -0.48
HOXC6-202ENST00000394331 KRTAP4-16G5E9R7 235 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms