RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 F8WDY8 70 aa7.21□□□□□ -1.26
TCOF1-203ENST00000394269 ELOF1P60002 83 aaKnown RBP7.2□□□□□ -1.26
TCOF1-203ENST00000394269 LINC00167Q96N53 147 aa7.2□□□□□ -1.26
TCOF1-203ENST00000394269 DSCR8Q96T75 97 aa7.2□□□□□ -1.26
TCOF1-203ENST00000394269 Q6Q795 121 aa7.2□□□□□ -1.26
TCOF1-203ENST00000394269 DNAH7Q8WXX0 4024 aa7.19□□□□□ -1.26
TCOF1-203ENST00000394269 LINC00643Q86TS7 51 aa7.19□□□□□ -1.26
TCOF1-203ENST00000394269 CHTF8P0CG12 524 aa7.19□□□□□ -1.26
TCOF1-203ENST00000394269 ETDCA0A1B0GVM5 59 aa7.18□□□□□ -1.26
TCOF1-203ENST00000394269 LOC107984640A0A0U1RRK4 108 aa7.18□□□□□ -1.26
TCOF1-203ENST00000394269 CCKP06307 115 aa7.18□□□□□ -1.26
TCOF1-203ENST00000394269 HIST1H4AP62805 103 aaKnown RBP7.18□□□□□ -1.26
TCOF1-203ENST00000394269 C3orf22Q8N5N4 141 aa7.18□□□□□ -1.26
TCOF1-203ENST00000394269 FAM236AA0A1B0GUQ0 79 aa7.17□□□□□ -1.26
TCOF1-203ENST00000394269 FAM236BA0A1B0GV22 79 aa7.17□□□□□ -1.26
TCOF1-203ENST00000394269 OBSCN-AS1Q96MR7 158 aa7.17□□□□□ -1.26
TCOF1-203ENST00000394269 PRKDCP78527 4128 aaKnown RBP7.17□□□□□ -1.26
TCOF1-203ENST00000394269 A0A096LNI7 61 aa7.17□□□□□ -1.26
TCOF1-203ENST00000394269 UBE2BP63146 152 aa7.17□□□□□ -1.26
TCOF1-203ENST00000394269 PLECQ15149 4684 aaKnown RBP7.17□□□□□ -1.26
TCOF1-203ENST00000394269 TRBV7-7A0A0K0K1E9 115 aa7.17□□□□□ -1.26
TCOF1-203ENST00000394269 MRPL55Q7Z7F7 128 aaKnown RBP7.17□□□□□ -1.26
TCOF1-203ENST00000394269 LINC00528Q8N1L1 170 aa7.16□□□□□ -1.26
TCOF1-203ENST00000394269 NUPR2A6NF83 97 aa7.16□□□□□ -1.26
TCOF1-203ENST00000394269 A0A087WVE0 104 aa7.15□□□□□ -1.26
TCOF1-203ENST00000394269 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.15□□□□□ -1.26
TCOF1-203ENST00000394269 KRTAP7-1Q8IUC3 87 aa7.15□□□□□ -1.26
TCOF1-203ENST00000394269 HAMPP81172 84 aa7.15□□□□□ -1.26
TCOF1-203ENST00000394269 NBDYA0A0U1RRE5 68 aa7.15□□□□□ -1.27
TCOF1-203ENST00000394269 C4orf48Q5BLP8 95 aa7.15□□□□□ -1.27
TCOF1-203ENST00000394269 ST20-AS1Q8NBB2 130 aa7.14□□□□□ -1.27
TCOF1-203ENST00000394269 KCNQ1DNQ9H478 68 aa7.14□□□□□ -1.27
TCOF1-203ENST00000394269 TLX1NBP0CAT3 122 aa7.14□□□□□ -1.27
TCOF1-203ENST00000394269 A0A1W2PNN7 141 aa7.14□□□□□ -1.27
TCOF1-203ENST00000394269 IGLV1-50A0A075B6I6 118 aa7.13□□□□□ -1.27
TCOF1-203ENST00000394269 UBL5Q9BZL1 73 aa7.13□□□□□ -1.27
TCOF1-203ENST00000394269 PRLHP81277 87 aa7.12□□□□□ -1.27
TCOF1-203ENST00000394269 Q6ZQT0 140 aa7.12□□□□□ -1.27
TCOF1-203ENST00000394269 HIGD2AQ9BW72 106 aa7.12□□□□□ -1.27
TCOF1-203ENST00000394269 SCXQ7RTU7 201 aa7.11□□□□□ -1.27
TCOF1-203ENST00000394269 FAM19A1Q7Z5A9 133 aa7.11□□□□□ -1.27
TCOF1-203ENST00000394269 ERC2-IT1O76042 136 aa7.11□□□□□ -1.27
TCOF1-203ENST00000394269 GHRHP01286 108 aa7.11□□□□□ -1.27
TCOF1-203ENST00000394269 Q9BRP9 147 aa7.11□□□□□ -1.27
TCOF1-203ENST00000394269 Q6ZRX8 168 aa7.1□□□□□ -1.27
TCOF1-203ENST00000394269 PHF5AQ7RTV0 110 aaKnown RBP7.1□□□□□ -1.27
TCOF1-203ENST00000394269 TRBV7-6A0A0J9YX20 115 aa7.1□□□□□ -1.27
TCOF1-203ENST00000394269 C3orf84H3BNL1 204 aa7.1□□□□□ -1.27
TCOF1-203ENST00000394269 C5orf47Q569G3 176 aa7.1□□□□□ -1.27
TCOF1-203ENST00000394269 STARD9Q9P2P6 4700 aa7.1□□□□□ -1.27
TCOF1-203ENST00000394269 REG3GQ6UW15 175 aa7.1□□□□□ -1.27
TCOF1-203ENST00000394269 CYSTM1Q9H1C7 97 aa7.1□□□□□ -1.27
TCOF1-203ENST00000394269 C16orf90A8MZG2 172 aa7.09□□□□□ -1.27
TCOF1-203ENST00000394269 Q8N377 158 aa7.08□□□□□ -1.28
TCOF1-203ENST00000394269 C14orf177Q52M58 125 aa7.08□□□□□ -1.28
TCOF1-203ENST00000394269 A0A0G2JQZ4 141 aa7.08□□□□□ -1.28
TCOF1-203ENST00000394269 PRYO14603 147 aa7.07□□□□□ -1.28
TCOF1-203ENST00000394269 DHRS4-AS1Q9P1J3 65 aa7.07□□□□□ -1.28
TCOF1-203ENST00000394269 DNAH1Q9P2D7 4330 aa7.07□□□□□ -1.28
TCOF1-203ENST00000394269 PLA2G2DQ9UNK4 145 aa7.07□□□□□ -1.28
TCOF1-203ENST00000394269 CNBPP62633 177 aaKnown RBP7.06□□□□□ -1.28
TCOF1-203ENST00000394269 IMUPQ9GZP8 106 aa7.06□□□□□ -1.28
TCOF1-203ENST00000394269 PANO1I0J062 215 aa7.05□□□□□ -1.28
TCOF1-203ENST00000394269 Q6JHZ5 121 aa7.05□□□□□ -1.28
TCOF1-203ENST00000394269 LOC110117498A0A087WWA1 95 aa7.05□□□□□ -1.28
TCOF1-203ENST00000394269 LRCOL1A6NCL2 159 aa7.05□□□□□ -1.28
TCOF1-203ENST00000394269 Q6ZVQ6 151 aa7.05□□□□□ -1.28
TCOF1-203ENST00000394269 H3BQ85 93 aa7.04□□□□□ -1.28
TCOF1-203ENST00000394269 KRTAP11-1Q8IUC1 163 aa7.04□□□□□ -1.28
TCOF1-203ENST00000394269 KMT2AQ03164 3969 aa7.04□□□□□ -1.28
TCOF1-203ENST00000394269 KRTAP4-16G5E9R7 235 aaPredicted RBP7.04□□□□□ -1.28
TCOF1-203ENST00000394269 C9orf163Q8N9P6 203 aa7.04□□□□□ -1.28
TCOF1-203ENST00000394269 IGLV5-37A0A075B6J1 123 aa7.03□□□□□ -1.28
TCOF1-203ENST00000394269 TRBV7-4A0A0J9YYF1 115 aa7.03□□□□□ -1.28
TCOF1-203ENST00000394269 PDE6GP18545 87 aa7.03□□□□□ -1.28
TCOF1-203ENST00000394269 LINC01547P58512 204 aaPredicted RBP7.02□□□□□ -1.29
TCOF1-203ENST00000394269 Q8N9L7 120 aa7.02□□□□□ -1.29
TCOF1-203ENST00000394269 SPRR1AP35321 89 aa7.02□□□□□ -1.29
TCOF1-203ENST00000394269 UBE2AP49459 152 aa7.02□□□□□ -1.29
TCOF1-203ENST00000394269 C9orf153Q5TBE3 101 aa7.02□□□□□ -1.29
TCOF1-203ENST00000394269 NREPQ16612 68 aa7.01□□□□□ -1.29
TCOF1-203ENST00000394269 C1orf137Q5JT78 98 aa7.01□□□□□ -1.29
TCOF1-203ENST00000394269 Q6ZRN7 208 aaPredicted RBP7.01□□□□□ -1.29
TCOF1-203ENST00000394269 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7□□□□□ -1.29
TCOF1-203ENST00000394269 A0A087WTM6 91 aa6.99□□□□□ -1.29
TCOF1-203ENST00000394269 F8WEM9 126 aa6.99□□□□□ -1.29
TCOF1-203ENST00000394269 EPM2AB3EWF7 344 aa6.99□□□□□ -1.29
TCOF1-203ENST00000394269 PKIGQ9Y2B9 76 aa6.98□□□□□ -1.29
TCOF1-203ENST00000394269 C1orf134Q5TEV5 83 aa6.97□□□□□ -1.29
TCOF1-203ENST00000394269 RTL8CO15255 209 aa6.97□□□□□ -1.29
TCOF1-203ENST00000394269 DEFB116Q30KQ4 102 aa6.96□□□□□ -1.3
TCOF1-203ENST00000394269 ATOX1O00244 68 aa6.96□□□□□ -1.3
TCOF1-203ENST00000394269 FLG2Q5D862 2391 aaPredicted RBP6.95□□□□□ -1.3
TCOF1-203ENST00000394269 A0A1W2PNM2 257 aa6.95□□□□□ -1.3
TCOF1-203ENST00000394269 COX7CP15954 63 aa6.95□□□□□ -1.3
TCOF1-203ENST00000394269 V9GYY9 64 aa6.95□□□□□ -1.3
TCOF1-203ENST00000394269 UQCRQO14949 82 aa6.95□□□□□ -1.3
TCOF1-203ENST00000394269 ATP5EP2Q5VTU8 51 aa6.95□□□□□ -1.3
TCOF1-203ENST00000394269 LINC00474Q9P2X8 69 aa6.95□□□□□ -1.3
TCOF1-203ENST00000394269 WWC2-AS2Q96NR7 200 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms