RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 TM2D3Q9BRN9 247 aa8.01□□□□□ -1.13
RFC5-201ENST00000392542 FLNBO75369 2602 aaKnown RBP8.01□□□□□ -1.13
RFC5-201ENST00000392542 SMIM20Q8N5G0 67 aa8.01□□□□□ -1.13
RFC5-201ENST00000392542 PRB2P02812 416 aaPredicted RBP8□□□□□ -1.13
RFC5-201ENST00000392542 CASC10Q5T4H9 136 aa8□□□□□ -1.13
RFC5-201ENST00000392542 CXCL6P80162 114 aa7.99□□□□□ -1.13
RFC5-201ENST00000392542 RMI2Q96E14 147 aa7.99□□□□□ -1.13
RFC5-201ENST00000392542 NOTCH1P46531 2555 aa7.98□□□□□ -1.13
RFC5-201ENST00000392542 IGLV5-37A0A075B6J1 123 aa7.98□□□□□ -1.13
RFC5-201ENST00000392542 CYSTM1Q9H1C7 97 aa7.98□□□□□ -1.13
RFC5-201ENST00000392542 K7EIL1 84 aa7.97□□□□□ -1.13
RFC5-201ENST00000392542 BAHCC1Q9P281 2608 aa7.97□□□□□ -1.13
RFC5-201ENST00000392542 PRYO14603 147 aa7.97□□□□□ -1.13
RFC5-201ENST00000392542 BCE1O60756 84 aa7.96□□□□□ -1.14
RFC5-201ENST00000392542 FAM168BA1KXE4 195 aa7.95□□□□□ -1.14
RFC5-201ENST00000392542 IGLV1-50A0A075B6I6 118 aa7.94□□□□□ -1.14
RFC5-201ENST00000392542 RPL37AP8A6NKH3 93 aa7.94□□□□□ -1.14
RFC5-201ENST00000392542 KRTAP4-16G5E9R7 235 aaPredicted RBP7.94□□□□□ -1.14
RFC5-201ENST00000392542 Q8N377 158 aa7.94□□□□□ -1.14
RFC5-201ENST00000392542 DHRS4-AS1Q9P1J3 65 aa7.94□□□□□ -1.14
RFC5-201ENST00000392542 SPRR1AP35321 89 aa7.94□□□□□ -1.14
RFC5-201ENST00000392542 Q6ZRX8 168 aa7.94□□□□□ -1.14
RFC5-201ENST00000392542 KRTAP7-1Q8IUC3 87 aa7.93□□□□□ -1.14
RFC5-201ENST00000392542 DEFB105AQ8NG35 78 aa7.93□□□□□ -1.14
RFC5-201ENST00000392542 TMEM258P61165 79 aa7.93□□□□□ -1.14
RFC5-201ENST00000392542 SCXQ7RTU7 201 aa7.93□□□□□ -1.14
RFC5-201ENST00000392542 ETDCA0A1B0GVM5 59 aa7.92□□□□□ -1.14
RFC5-201ENST00000392542 TRAV7A0A075B6U4 112 aa7.92□□□□□ -1.14
RFC5-201ENST00000392542 LOC107984640A0A0U1RRK4 108 aa7.92□□□□□ -1.14
RFC5-201ENST00000392542 Q9BRP9 147 aa7.92□□□□□ -1.14
RFC5-201ENST00000392542 NBEAL1Q6ZS30 2694 aa7.92□□□□□ -1.14
RFC5-201ENST00000392542 IGLV5-48A0A075B6I7 105 aa7.91□□□□□ -1.14
RFC5-201ENST00000392542 FAM19A5Q7Z5A7 132 aaPredicted RBP7.9□□□□□ -1.14
RFC5-201ENST00000392542 MRPL55Q7Z7F7 128 aaKnown RBP7.9□□□□□ -1.14
RFC5-201ENST00000392542 COL6A5A8TX70 2615 aa7.9□□□□□ -1.14
RFC5-201ENST00000392542 DNAH10Q8IVF4 4471 aa7.89□□□□□ -1.15
RFC5-201ENST00000392542 DYNC2H1Q8NCM8 4307 aaKnown RBP7.88□□□□□ -1.15
RFC5-201ENST00000392542 J3KT08 172 aa7.88□□□□□ -1.15
RFC5-201ENST00000392542 NREPQ16612 68 aa7.88□□□□□ -1.15
RFC5-201ENST00000392542 C20orf197Q8N268 126 aa7.88□□□□□ -1.15
RFC5-201ENST00000392542 DNAH9Q9NYC9 4486 aa7.88□□□□□ -1.15
RFC5-201ENST00000392542 ST20-AS1Q8NBB2 130 aa7.87□□□□□ -1.15
RFC5-201ENST00000392542 C3orf84H3BNL1 204 aa7.87□□□□□ -1.15
RFC5-201ENST00000392542 TNP2Q05952 138 aa7.87□□□□□ -1.15
RFC5-201ENST00000392542 RPS28P62857 69 aaKnown RBP7.86□□□□□ -1.15
RFC5-201ENST00000392542 A0A1B0GW54 56 aa7.85□□□□□ -1.15
RFC5-201ENST00000392542 REG3GQ6UW15 175 aa7.85□□□□□ -1.15
RFC5-201ENST00000392542 KRTAP1-5Q9BYS1 174 aa7.85□□□□□ -1.15
RFC5-201ENST00000392542 ERC2-IT1O76042 136 aa7.84□□□□□ -1.15
RFC5-201ENST00000392542 IGKV4-1P06312 121 aa7.84□□□□□ -1.15
RFC5-201ENST00000392542 FUSP35637 526 aaKnown RBP eCLIP7.84□□□□□ -1.15
RFC5-201ENST00000392542 UBE2BP63146 152 aa7.84□□□□□ -1.15
RFC5-201ENST00000392542 DPH3Q96FX2 82 aa7.84□□□□□ -1.15
RFC5-201ENST00000392542 A0A1W2PNM2 257 aa7.83□□□□□ -1.16
RFC5-201ENST00000392542 BPY2O14599 106 aa7.83□□□□□ -1.16
RFC5-201ENST00000392542 C1orf137Q5JT78 98 aa7.83□□□□□ -1.16
RFC5-201ENST00000392542 Q8N9L7 120 aa7.83□□□□□ -1.16
RFC5-201ENST00000392542 CNBPP62633 177 aaKnown RBP7.82□□□□□ -1.16
RFC5-201ENST00000392542 A0A096LNI7 61 aa7.82□□□□□ -1.16
RFC5-201ENST00000392542 KLKP1Q107X0 134 aa7.82□□□□□ -1.16
RFC5-201ENST00000392542 Q8NBF4 154 aa7.82□□□□□ -1.16
RFC5-201ENST00000392542 LYSTQ99698 3801 aa7.82□□□□□ -1.16
RFC5-201ENST00000392542 C16orf90A8MZG2 172 aa7.81□□□□□ -1.16
RFC5-201ENST00000392542 PSCAO43653 123 aa7.81□□□□□ -1.16
RFC5-201ENST00000392542 UBE2DNLQ8IWF7 75 aa7.81□□□□□ -1.16
RFC5-201ENST00000392542 SVIPQ8NHG7 77 aa7.81□□□□□ -1.16
RFC5-201ENST00000392542 APLNQ9ULZ1 77 aa7.8□□□□□ -1.16
RFC5-201ENST00000392542 SPRR4Q96PI1 79 aa7.8□□□□□ -1.16
RFC5-201ENST00000392542 MGAM2Q2M2H8 2515 aa7.79□□□□□ -1.16
RFC5-201ENST00000392542 IGKV2-24A0A0C4DH68 120 aa7.79□□□□□ -1.16
RFC5-201ENST00000392542 H7BZZ5 65 aa7.79□□□□□ -1.16
RFC5-201ENST00000392542 A0A1W2PNN7 141 aa7.79□□□□□ -1.16
RFC5-201ENST00000392542 SMIM29Q86T20 159 aa7.79□□□□□ -1.16
RFC5-201ENST00000392542 SNURFQ9Y675 71 aa7.78□□□□□ -1.16
RFC5-201ENST00000392542 FAM236DA0A1B0GTK5 79 aa7.78□□□□□ -1.16
RFC5-201ENST00000392542 FAM236CP0DP71 79 aa7.78□□□□□ -1.16
RFC5-201ENST00000392542 STAB2Q8WWQ8 2551 aa7.77□□□□□ -1.17
RFC5-201ENST00000392542 C14orf177Q52M58 125 aa7.77□□□□□ -1.17
RFC5-201ENST00000392542 PLECQ15149 4684 aaKnown RBP7.77□□□□□ -1.17
RFC5-201ENST00000392542 COL7A1Q02388 2944 aa7.76□□□□□ -1.17
RFC5-201ENST00000392542 OXTP01178 125 aa7.76□□□□□ -1.17
RFC5-201ENST00000392542 F8WEM9 126 aa7.76□□□□□ -1.17
RFC5-201ENST00000392542 LINC00476Q8WZB0 136 aa7.76□□□□□ -1.17
RFC5-201ENST00000392542 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.75□□□□□ -1.17
RFC5-201ENST00000392542 PRLHP81277 87 aa7.75□□□□□ -1.17
RFC5-201ENST00000392542 OCR1Q9BZK8 76 aa7.74□□□□□ -1.17
RFC5-201ENST00000392542 NDUFC1O43677 76 aa7.73□□□□□ -1.17
RFC5-201ENST00000392542 TMEM254Q8TBM7 123 aa7.72□□□□□ -1.17
RFC5-201ENST00000392542 B9D2Q9BPU9 175 aa7.72□□□□□ -1.17
RFC5-201ENST00000392542 DNAH7Q8WXX0 4024 aa7.72□□□□□ -1.17
RFC5-201ENST00000392542 IGFL1Q6UW32 110 aa7.72□□□□□ -1.17
RFC5-201ENST00000392542 HIGD2AQ9BW72 106 aa7.72□□□□□ -1.17
RFC5-201ENST00000392542 IGLV8-61A0A075B6I0 122 aa7.71□□□□□ -1.17
RFC5-201ENST00000392542 CHTF8P0CG12 524 aa7.71□□□□□ -1.17
RFC5-201ENST00000392542 DSCR10P59022 87 aa7.71□□□□□ -1.17
RFC5-201ENST00000392542 PHF5AQ7RTV0 110 aaKnown RBP7.71□□□□□ -1.17
RFC5-201ENST00000392542 KRTAP11-1Q8IUC1 163 aa7.7□□□□□ -1.18
RFC5-201ENST00000392542 C9orf163Q8N9P6 203 aa7.7□□□□□ -1.18
RFC5-201ENST00000392542 CSMD3Q7Z407 3707 aa7.69□□□□□ -1.18
RFC5-201ENST00000392542 LRCOL1A6NCL2 159 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms