RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 C4BP0C0L5 1744 aa-2.74□□□□□ -2.85
RNU6-1228P-201ENST00000391014 RGPD8O14715 1765 aaPredicted RBP-2.74□□□□□ -2.85
RNU6-1228P-201ENST00000391014 RGPD5Q99666 1765 aa-2.74□□□□□ -2.85
RNU6-1228P-201ENST00000391014 C7orf77A4D0Y5 90 aa-2.75□□□□□ -2.85
RNU6-1228P-201ENST00000391014 MT2AP02795 61 aa-2.75□□□□□ -2.85
RNU6-1228P-201ENST00000391014 MT1LQ93083 61 aa-2.75□□□□□ -2.85
RNU6-1228P-201ENST00000391014 NAP1L6A6NFF2 107 aa-2.76□□□□□ -2.85
RNU6-1228P-201ENST00000391014 RPL38P63173 70 aaKnown RBP-2.76□□□□□ -2.85
RNU6-1228P-201ENST00000391014 PHLPP1O60346 1717 aa-2.76□□□□□ -2.85
RNU6-1228P-201ENST00000391014 TOP2BQ02880 1626 aa-2.77□□□□□ -2.85
RNU6-1228P-201ENST00000391014 SMR3BP02814 79 aaPredicted RBP-2.77□□□□□ -2.85
RNU6-1228P-201ENST00000391014 C3orf79P0CE67 100 aa-2.77□□□□□ -2.85
RNU6-1228P-201ENST00000391014 ARPC4P59998 168 aa-2.77□□□□□ -2.85
RNU6-1228P-201ENST00000391014 NAIPQ13075 1403 aa-2.77□□□□□ -2.85
RNU6-1228P-201ENST00000391014 SHPRHQ149N8 1683 aa-2.78□□□□□ -2.85
RNU6-1228P-201ENST00000391014 DR1Q01658 176 aa-2.78□□□□□ -2.85
RNU6-1228P-201ENST00000391014 KIF20BQ96Q89 1820 aa-2.78□□□□□ -2.85
RNU6-1228P-201ENST00000391014 MEIG1Q5JSS6 88 aa-2.79□□□□□ -2.86
RNU6-1228P-201ENST00000391014 ANP32BQ92688 251 aaKnown RBP-2.79□□□□□ -2.86
RNU6-1228P-201ENST00000391014 SAMD9Q5K651 1589 aa-2.79□□□□□ -2.86
RNU6-1228P-201ENST00000391014 ATMQ13315 3056 aa-2.79□□□□□ -2.86
RNU6-1228P-201ENST00000391014 CGREF1Q99674 301 aa-2.8□□□□□ -2.86
RNU6-1228P-201ENST00000391014 ABCC10Q5T3U5 1492 aa-2.81□□□□□ -2.86
RNU6-1228P-201ENST00000391014 KTN1Q86UP2 1357 aaKnown RBP-2.81□□□□□ -2.86
RNU6-1228P-201ENST00000391014 TMEM262E9PQX1 116 aa-2.81□□□□□ -2.86
RNU6-1228P-201ENST00000391014 PLXNC1O60486 1568 aa-2.82□□□□□ -2.86
RNU6-1228P-201ENST00000391014 HSD52Q0P140 79 aa-2.82□□□□□ -2.86
RNU6-1228P-201ENST00000391014 ROBO1Q9Y6N7 1651 aa-2.82□□□□□ -2.86
RNU6-1228P-201ENST00000391014 SCAPERQ9BY12 1400 aa-2.83□□□□□ -2.86
RNU6-1228P-201ENST00000391014 FAM24AA6NFZ4 105 aa-2.83□□□□□ -2.86
RNU6-1228P-201ENST00000391014 PRO3102Q9H379 93 aa-2.83□□□□□ -2.86
RNU6-1228P-201ENST00000391014 PAIP2BQ9ULR5 123 aaKnown RBP-2.83□□□□□ -2.86
RNU6-1228P-201ENST00000391014 DNAH10Q8IVF4 4471 aa-2.83□□□□□ -2.86
RNU6-1228P-201ENST00000391014 MAGI2Q86UL8 1455 aa-2.84□□□□□ -2.86
RNU6-1228P-201ENST00000391014 MON2Q7Z3U7 1717 aa-2.84□□□□□ -2.86
RNU6-1228P-201ENST00000391014 FAM25AB3EWG3 89 aa-2.84□□□□□ -2.86
RNU6-1228P-201ENST00000391014 FAM25CB3EWG5 89 aa-2.84□□□□□ -2.86
RNU6-1228P-201ENST00000391014 FAM25GB3EWG6 89 aa-2.84□□□□□ -2.86
RNU6-1228P-201ENST00000391014 PYDC1Q8WXC3 89 aa-2.84□□□□□ -2.86
RNU6-1228P-201ENST00000391014 QSER1Q2KHR3 1735 aa-2.85□□□□□ -2.86
RNU6-1228P-201ENST00000391014 TOPAZ1Q8N9V7 1692 aa-2.85□□□□□ -2.87
RNU6-1228P-201ENST00000391014 UBR3Q6ZT12 1888 aa-2.85□□□□□ -2.87
RNU6-1228P-201ENST00000391014 CRYM-AS1A6NIL9 109 aa-2.85□□□□□ -2.87
RNU6-1228P-201ENST00000391014 DPH3P1Q9H4G8 78 aa-2.85□□□□□ -2.87
RNU6-1228P-201ENST00000391014 CSMD2Q7Z408 3487 aa-2.85□□□□□ -2.87
RNU6-1228P-201ENST00000391014 LRRC9Q6ZRR7 1453 aa-2.85□□□□□ -2.87
RNU6-1228P-201ENST00000391014 C5P01031 1676 aa-2.85□□□□□ -2.87
RNU6-1228P-201ENST00000391014 LINC00158P58513 81 aa-2.86□□□□□ -2.87
RNU6-1228P-201ENST00000391014 KRTDAPP60985 99 aa-2.86□□□□□ -2.87
RNU6-1228P-201ENST00000391014 SELENOWP63302 87 aa-2.86□□□□□ -2.87
RNU6-1228P-201ENST00000391014 PRUNE2Q8WUY3 3088 aa-2.87□□□□□ -2.87
RNU6-1228P-201ENST00000391014 FAM135AQ9P2D6 1515 aa-2.87□□□□□ -2.87
RNU6-1228P-201ENST00000391014 OOSP1A8MZH6 123 aa-2.87□□□□□ -2.87
RNU6-1228P-201ENST00000391014 COX7BP24311 80 aa-2.87□□□□□ -2.87
RNU6-1228P-201ENST00000391014 SPTBN5Q9NRC6 3674 aaKnown RBP-2.87□□□□□ -2.87
RNU6-1228P-201ENST00000391014 TNRC6CQ9HCJ0 1690 aaKnown RBP-2.88□□□□□ -2.87
RNU6-1228P-201ENST00000391014 KRTAP8-1Q8IUC2 63 aa-2.88□□□□□ -2.87
RNU6-1228P-201ENST00000391014 ABCC2Q92887 1545 aa-2.88□□□□□ -2.87
RNU6-1228P-201ENST00000391014 TNP1P09430 55 aa-2.89□□□□□ -2.87
RNU6-1228P-201ENST00000391014 PMCHL1Q16048 86 aa-2.89□□□□□ -2.87
RNU6-1228P-201ENST00000391014 ALKAL2Q6UX46 152 aa-2.89□□□□□ -2.87
RNU6-1228P-201ENST00000391014 DEFB106AQ8N104 65 aa-2.89□□□□□ -2.87
RNU6-1228P-201ENST00000391014 ZNF436-AS1Q8NC38 126 aaPredicted RBP-2.89□□□□□ -2.87
RNU6-1228P-201ENST00000391014 CDC42BPAQ5VT25 1732 aa-2.9□□□□□ -2.87
RNU6-1228P-201ENST00000391014 TIAM2Q8IVF5 1701 aa-2.9□□□□□ -2.87
RNU6-1228P-201ENST00000391014 IGLC2P0DOY2 106 aa-2.9□□□□□ -2.87
RNU6-1228P-201ENST00000391014 IGLC3P0DOY3 106 aa-2.9□□□□□ -2.87
RNU6-1228P-201ENST00000391014 CUL7Q14999 1698 aa-2.9□□□□□ -2.87
RNU6-1228P-201ENST00000391014 MAGI3Q5TCQ9 1506 aa-2.9□□□□□ -2.87
RNU6-1228P-201ENST00000391014 SCN11AQ9UI33 1791 aa-2.91□□□□□ -2.88
RNU6-1228P-201ENST00000391014 TRBV25-1A0A075B6N4 114 aa-2.91□□□□□ -2.88
RNU6-1228P-201ENST00000391014 K7EP13 123 aa-2.91□□□□□ -2.88
RNU6-1228P-201ENST00000391014 SERP2Q8N6R1 65 aa-2.91□□□□□ -2.88
RNU6-1228P-201ENST00000391014 DEPDC5O75140 1603 aa-2.92□□□□□ -2.88
RNU6-1228P-201ENST00000391014 MMP24-AS1A0A0U1RRL7 71 aa-2.92□□□□□ -2.88
RNU6-1228P-201ENST00000391014 H3BQ15 152 aa-2.92□□□□□ -2.88
RNU6-1228P-201ENST00000391014 LINC00470Q9BZP3 86 aa-2.92□□□□□ -2.88
RNU6-1228P-201ENST00000391014 USP32Q8NFA0 1604 aa-2.93□□□□□ -2.88
RNU6-1228P-201ENST00000391014 RGPD3A6NKT7 1758 aaPredicted RBP-2.94□□□□□ -2.88
RNU6-1228P-201ENST00000391014 RGPD4Q7Z3J3 1758 aa-2.94□□□□□ -2.88
RNU6-1228P-201ENST00000391014 WIZO95785 1651 aa-2.94□□□□□ -2.88
RNU6-1228P-201ENST00000391014 TMEM218A2RU14 115 aa-2.94□□□□□ -2.88
RNU6-1228P-201ENST00000391014 HMGN3Q15651 99 aa-2.94□□□□□ -2.88
RNU6-1228P-201ENST00000391014 CACFD1Q9UGQ2 172 aa-2.94□□□□□ -2.88
RNU6-1228P-201ENST00000391014 CEP170BQ9Y4F5 1589 aaPredicted RBP-2.95□□□□□ -2.88
RNU6-1228P-201ENST00000391014 NDUFC1O43677 76 aa-2.95□□□□□ -2.88
RNU6-1228P-201ENST00000391014 CENPEQ02224 2701 aa-2.96□□□□□ -2.88
RNU6-1228P-201ENST00000391014 MPC2O95563 127 aa-2.96□□□□□ -2.88
RNU6-1228P-201ENST00000391014 AKAIN1P0CW23 69 aa-2.96□□□□□ -2.88
RNU6-1228P-201ENST00000391014 ASIPP42127 132 aa-2.96□□□□□ -2.88
RNU6-1228P-201ENST00000391014 PKD1L3Q7Z443 1732 aa-2.96□□□□□ -2.88
RNU6-1228P-201ENST00000391014 LYNX1G3V0Z9 82 aa-2.97□□□□□ -2.88
RNU6-1228P-201ENST00000391014 TIMM8BQ9Y5J9 83 aaPredicted RBP-2.97□□□□□ -2.88
RNU6-1228P-201ENST00000391014 CDC42BPGQ6DT37 1551 aa-2.97□□□□□ -2.89
RNU6-1228P-201ENST00000391014 ARHGAP5Q13017 1502 aa-2.98□□□□□ -2.89
RNU6-1228P-201ENST00000391014 UQCRHP07919 91 aa-2.98□□□□□ -2.89
RNU6-1228P-201ENST00000391014 FOCADQ5VW36 1801 aa-2.98□□□□□ -2.89
RNU6-1228P-201ENST00000391014 D6R8Y8 96 aa-2.99□□□□□ -2.89
RNU6-1228P-201ENST00000391014 GNG7O60262 68 aa-2.99□□□□□ -2.89
RNU6-1228P-201ENST00000391014 IFI6P09912 130 aa-2.99□□□□□ -2.89
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms