RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 CPSF4LA6NMK7 179 aaKnown RBP0.76□□□□□ -2.29
TRAV40-201ENST00000390467 PIN1P1O15428 100 aa0.76□□□□□ -2.29
TRAV40-201ENST00000390467 LY6G6CO95867 125 aa0.76□□□□□ -2.29
TRAV40-201ENST00000390467 HAMPP81172 84 aa0.76□□□□□ -2.29
TRAV40-201ENST00000390467 UNQ6190/PRO20217Q6UXQ8 127 aa0.76□□□□□ -2.29
TRAV40-201ENST00000390467 SSBP3-AS1Q7Z2R9 100 aa0.76□□□□□ -2.29
TRAV40-201ENST00000390467 JMJD1CQ15652 2540 aa0.76□□□□□ -2.29
TRAV40-201ENST00000390467 ALMS1Q8TCU4 4167 aa0.76□□□□□ -2.29
TRAV40-201ENST00000390467 QSER1Q2KHR3 1735 aa0.75□□□□□ -2.29
TRAV40-201ENST00000390467 DDX60Q8IY21 1712 aaKnown RBP0.75□□□□□ -2.29
TRAV40-201ENST00000390467 FAM208BQ5VWN6 2430 aa0.75□□□□□ -2.29
TRAV40-201ENST00000390467 PDE4DIPQ5VU43 2346 aa0.75□□□□□ -2.29
TRAV40-201ENST00000390467 PLCE1Q9P212 2302 aa0.75□□□□□ -2.29
TRAV40-201ENST00000390467 SPINK4O60575 86 aa0.75□□□□□ -2.29
TRAV40-201ENST00000390467 CRIP1P50238 77 aa0.75□□□□□ -2.29
TRAV40-201ENST00000390467 A0A0G2JMZ2 1700 aa0.75□□□□□ -2.29
TRAV40-201ENST00000390467 IQGAP1P46940 1657 aa0.75□□□□□ -2.29
TRAV40-201ENST00000390467 ATP7AQ04656 1500 aa0.74□□□□□ -2.29
TRAV40-201ENST00000390467 H0YGX0 51 aa0.74□□□□□ -2.29
TRAV40-201ENST00000390467 SPINK13Q1W4C9 94 aa0.74□□□□□ -2.29
TRAV40-201ENST00000390467 PIEZO2Q9H5I5 2752 aa0.74□□□□□ -2.29
TRAV40-201ENST00000390467 C4AP0C0L4 1744 aa0.74□□□□□ -2.29
TRAV40-201ENST00000390467 SAMD9LQ8IVG5 1584 aa0.74□□□□□ -2.29
TRAV40-201ENST00000390467 E9PCH4 1651 aa0.73□□□□□ -2.29
TRAV40-201ENST00000390467 DEFB131BA0A096LNP1 70 aa0.73□□□□□ -2.29
TRAV40-201ENST00000390467 NDUFA3O95167 84 aa0.73□□□□□ -2.29
TRAV40-201ENST00000390467 ANGP03950 147 aaKnown RBP0.73□□□□□ -2.29
TRAV40-201ENST00000390467 RPL37P61927 97 aaKnown RBP0.73□□□□□ -2.29
TRAV40-201ENST00000390467 RPL38P63173 70 aaKnown RBP0.73□□□□□ -2.29
TRAV40-201ENST00000390467 LINC00575Q6W349 94 aa0.73□□□□□ -2.29
TRAV40-201ENST00000390467 TIMM8BQ9Y5J9 83 aaPredicted RBP0.73□□□□□ -2.29
TRAV40-201ENST00000390467 MROH2BQ7Z745 1585 aa0.73□□□□□ -2.29
TRAV40-201ENST00000390467 LRRC37AA6NMS7 1700 aa0.72□□□□□ -2.29
TRAV40-201ENST00000390467 PTPRZ1P23471 2315 aaPredicted RBP0.72□□□□□ -2.29
TRAV40-201ENST00000390467 RP1L1Q8IWN7 2480 aaPredicted RBP0.72□□□□□ -2.29
TRAV40-201ENST00000390467 SPTY2D1-AS1A0A0U1RR47 76 aa0.72□□□□□ -2.29
TRAV40-201ENST00000390467 FXYD6P3P58550 94 aa0.72□□□□□ -2.29
TRAV40-201ENST00000390467 CDKN2A-AS1Q9UH64 79 aa0.72□□□□□ -2.29
TRAV40-201ENST00000390467 TOGARAM1Q9Y4F4 1720 aa0.72□□□□□ -2.29
TRAV40-201ENST00000390467 KNL1Q8NG31 2342 aa0.71□□□□□ -2.3
TRAV40-201ENST00000390467 PKDREJQ9NTG1 2253 aa0.71□□□□□ -2.3
TRAV40-201ENST00000390467 MRPL33O75394 65 aaKnown RBP0.71□□□□□ -2.3
TRAV40-201ENST00000390467 LINC00158P58513 81 aa0.71□□□□□ -2.3
TRAV40-201ENST00000390467 Q6ZSA8 131 aa0.71□□□□□ -2.3
TRAV40-201ENST00000390467 CRIPTQ9P021 101 aa0.71□□□□□ -2.3
TRAV40-201ENST00000390467 C2CD3Q4AC94 2353 aa0.71□□□□□ -2.3
TRAV40-201ENST00000390467 CNTRLQ7Z7A1 2325 aa0.71□□□□□ -2.3
TRAV40-201ENST00000390467 PTPRQQ9UMZ3 2332 aa0.71□□□□□ -2.3
TRAV40-201ENST00000390467 AHNAK2Q8IVF2 5795 aa0.71□□□□□ -2.3
TRAV40-201ENST00000390467 WNK2Q9Y3S1 2297 aa0.71□□□□□ -2.3
TRAV40-201ENST00000390467 DUOX1Q9NRD9 1551 aa0.7□□□□□ -2.3
TRAV40-201ENST00000390467 ASH1LQ9NR48 2969 aaKnown RBP0.7□□□□□ -2.3
TRAV40-201ENST00000390467 LOC730098B7Z3J9 87 aa0.7□□□□□ -2.3
TRAV40-201ENST00000390467 I3L2K1 104 aa0.7□□□□□ -2.3
TRAV40-201ENST00000390467 UBE2DNLQ8IWF7 75 aa0.7□□□□□ -2.3
TRAV40-201ENST00000390467 Q8IZM0 81 aa0.7□□□□□ -2.3
TRAV40-201ENST00000390467 PRO3102Q9H379 93 aa0.7□□□□□ -2.3
TRAV40-201ENST00000390467 CLTCL1P53675 1640 aa0.7□□□□□ -2.3
TRAV40-201ENST00000390467 C4BP0C0L5 1744 aa0.69□□□□□ -2.3
TRAV40-201ENST00000390467 USF3Q68DE3 2245 aa0.69□□□□□ -2.3
TRAV40-201ENST00000390467 ROS1P08922 2347 aa0.69□□□□□ -2.3
TRAV40-201ENST00000390467 LYNX1G3V0Z9 82 aa0.69□□□□□ -2.3
TRAV40-201ENST00000390467 K7EIL1 84 aa0.69□□□□□ -2.3
TRAV40-201ENST00000390467 K7EQZ3 153 aa0.69□□□□□ -2.3
TRAV40-201ENST00000390467 LYNX1P0DP58 116 aa0.69□□□□□ -2.3
TRAV40-201ENST00000390467 DEFB123Q8N688 67 aa0.69□□□□□ -2.3
TRAV40-201ENST00000390467 LINC00308Q8TCZ7 52 aa0.69□□□□□ -2.3
TRAV40-201ENST00000390467 TMEM167BQ9NRX6 74 aa0.69□□□□□ -2.3
TRAV40-201ENST00000390467 REV3LO60673 3130 aa0.69□□□□□ -2.3
TRAV40-201ENST00000390467 SPTBN2O15020 2390 aa0.69□□□□□ -2.3
TRAV40-201ENST00000390467 TENM3Q9P273 2699 aa0.69□□□□□ -2.3
TRAV40-201ENST00000390467 SPTBN1Q01082 2364 aaKnown RBP0.68□□□□□ -2.3
TRAV40-201ENST00000390467 TFF3Q07654 80 aa0.68□□□□□ -2.3
TRAV40-201ENST00000390467 COX6B2Q6YFQ2 88 aa0.68□□□□□ -2.3
TRAV40-201ENST00000390467 MRPL34Q9BQ48 92 aaKnown RBP0.68□□□□□ -2.3
TRAV40-201ENST00000390467 SMIM2Q9BVW6 85 aa0.68□□□□□ -2.3
TRAV40-201ENST00000390467 TP53AIP1Q9HCN2 124 aa0.68□□□□□ -2.3
TRAV40-201ENST00000390467 LMO7Q8WWI1 1683 aa0.68□□□□□ -2.3
TRAV40-201ENST00000390467 TPRP12270 2363 aaKnown RBP0.68□□□□□ -2.3
TRAV40-201ENST00000390467 IGF2RP11717 2491 aa0.67□□□□□ -2.3
TRAV40-201ENST00000390467 DSPP15924 2871 aaKnown RBP0.67□□□□□ -2.3
TRAV40-201ENST00000390467 ZNF462Q96JM2 2506 aa0.67□□□□□ -2.3
TRAV40-201ENST00000390467 USMG5Q96IX5 58 aa0.67□□□□□ -2.3
TRAV40-201ENST00000390467 GVINP1Q7Z2Y8 2422 aa0.66□□□□□ -2.3
TRAV40-201ENST00000390467 TNRC6CQ9HCJ0 1690 aaKnown RBP0.66□□□□□ -2.3
TRAV40-201ENST00000390467 H0YAA0 97 aa0.66□□□□□ -2.3
TRAV40-201ENST00000390467 NDUFA1O15239 70 aa0.66□□□□□ -2.3
TRAV40-201ENST00000390467 KRTAP10-4P60372 401 aaPredicted RBP0.66□□□□□ -2.3
TRAV40-201ENST00000390467 COX6A2Q02221 97 aa0.66□□□□□ -2.3
TRAV40-201ENST00000390467 PIGYQ3MUY2 71 aa0.66□□□□□ -2.3
TRAV40-201ENST00000390467 CNFNQ9BYD5 112 aa0.66□□□□□ -2.3
TRAV40-201ENST00000390467 C10orf95Q9H7T3 257 aa0.66□□□□□ -2.3
TRAV40-201ENST00000390467 CACNA1HO95180 2353 aa0.65□□□□□ -2.3
TRAV40-201ENST00000390467 F8P00451 2351 aa0.65□□□□□ -2.3
TRAV40-201ENST00000390467 CCL22O00626 93 aa0.65□□□□□ -2.31
TRAV40-201ENST00000390467 PRB3Q04118 309 aaPredicted RBP0.65□□□□□ -2.31
TRAV40-201ENST00000390467 LELP1Q5T871 98 aa0.65□□□□□ -2.31
TRAV40-201ENST00000390467 ABCA12Q86UK0 2595 aa0.65□□□□□ -2.31
TRAV40-201ENST00000390467 PCNX1Q96RV3 2341 aa0.65□□□□□ -2.31
TRAV40-201ENST00000390467 GCC2Q8IWJ2 1684 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms