RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 C22orf42Q6IC83 251 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 TMEM14EPQ6UXP3 125 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 C2orf66Q6UXQ4 117 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 Q6ZVQ6 151 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 COX8CQ7Z4L0 72 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 TEN1Q86WV5 123 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 MUSTN1Q8IVN3 82 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 SLC7A5P1Q8MH63 180 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 SFT2D1Q8WV19 159 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 ANP32BQ92688 251 aaKnown RBP-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 NPCDR1Q9BY65 106 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 VCXQ9H320 206 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 VCX2Q9H322 139 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 GSKIPQ9P0R6 139 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 LGALS13Q9UHV8 139 aa-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 LSM2Q9Y333 95 aaKnown RBP-0.12□□□□□ -2.43
RNU6-42P-201ENST00000384165 F2Z2F3 143 aa-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 INMT-MINDY4F8WBC2 141 aa-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 SMKR1H3BMG3 65 aa-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 LYRM1O43325 122 aa-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 TIMM17BO60830 172 aa-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 ATP6V1G2O95670 118 aa-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 SMIM13P0DJ93 91 aa-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 IL7P13232 177 aa-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 MYL12AP19105 171 aa-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 NPC2P61916 151 aa-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 HERV-K104P63124 156 aa-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 SMIM15Q7Z3B0 74 aa-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 ENKURQ8TC29 256 aa-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 SMIM8Q96KF7 97 aa-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 SCGB3A1Q96QR1 104 aa-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 HOPXQ9BPY8 73 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 MAP1LC3CQ9BXW4 147 aa-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 MRPS26Q9BYN8 205 aaKnown RBP-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 RBM38Q9H0Z9 239 aaKnown RBP-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 EFCAB1Q9HAE3 211 aa-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 SAR1AQ9NR31 198 aa-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 C8orf17Q9NRJ1 99 aa-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 SPANXB1Q9NS25 103 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 KCNIP2Q9NS61 270 aa-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 C14orf166Q9Y224 244 aaKnown RBP-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 ORC6Q9Y5N6 252 aa-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 TRAPPC1Q9Y5R8 145 aa-0.13□□□□□ -2.43
RNU6-42P-201ENST00000384165 TRBV20OR9-2A0A075B6H5 130 aa-0.14□□□□□ -2.43
RNU6-42P-201ENST00000384165 TINCRA0A1B0GVN0 87 aa-0.14□□□□□ -2.43
RNU6-42P-201ENST00000384165 TCRBV3S1A0A5B6 114 aa-0.14□□□□□ -2.43
RNU6-42P-201ENST00000384165 SMIM30A4D0T7 59 aa-0.14□□□□□ -2.43
RNU6-42P-201ENST00000384165 HMSDA8MTL9 139 aa-0.14□□□□□ -2.43
RNU6-42P-201ENST00000384165 H3BRM9 83 aa-0.14□□□□□ -2.43
RNU6-42P-201ENST00000384165 MYL12BO14950 172 aa-0.14□□□□□ -2.43
RNU6-42P-201ENST00000384165 HPGDSO60760 199 aa-0.14□□□□□ -2.43
RNU6-42P-201ENST00000384165 SCGB1D1O95968 90 aa-0.14□□□□□ -2.43
RNU6-42P-201ENST00000384165 VBP1P61758 197 aa-0.14□□□□□ -2.43
RNU6-42P-201ENST00000384165 UBE2G1P62253 170 aa-0.14□□□□□ -2.43
RNU6-42P-201ENST00000384165 MRPS10P82664 201 aaKnown RBP-0.14□□□□□ -2.43
RNU6-42P-201ENST00000384165 SCGB2B2Q4G0G5 96 aa-0.14□□□□□ -2.43
RNU6-42P-201ENST00000384165 MEIG1Q5JSS6 88 aa-0.14□□□□□ -2.43
RNU6-42P-201ENST00000384165 TMEM91Q6ZNR0 172 aa-0.14□□□□□ -2.43
RNU6-42P-201ENST00000384165 C9orf62Q8N4C0 152 aa-0.14□□□□□ -2.43
RNU6-42P-201ENST00000384165 OR13C6PQ8NH95 151 aa-0.14□□□□□ -2.43
RNU6-42P-201ENST00000384165 THAP6Q8TBB0 222 aa-0.14□□□□□ -2.43
RNU6-42P-201ENST00000384165 MBD3L1Q8WWY6 194 aa-0.14□□□□□ -2.43
RNU6-42P-201ENST00000384165 SCGB3A2Q96PL1 93 aa-0.14□□□□□ -2.43
RNU6-42P-201ENST00000384165 GABARAPL3Q9BY60 117 aa-0.14□□□□□ -2.43
RNU6-42P-201ENST00000384165 GABARAPL1Q9H0R8 117 aa-0.14□□□□□ -2.43
RNU6-42P-201ENST00000384165 FGFR1OP2Q9NVK5 253 aa-0.14□□□□□ -2.43
RNU6-42P-201ENST00000384165 CBY1Q9Y3M2 126 aa-0.14□□□□□ -2.43
RNU6-42P-201ENST00000384165 TRBV7-4A0A0J9YYF1 115 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 MMP24-AS1A0A0U1RRL7 71 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 A0A1W2PPV4 95 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 A0A1W2PRE2 83 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 EFCAB10A6NFE3 127 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 HIGD1CA8MV81 97 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 EIF4EBP3O60516 100 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 NDUFB1O75438 58 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 NDUFC2O95298 119 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 SFT2D2O95562 160 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 SCGB1D2O95969 90 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 RAB4AP20338 218 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 GCHFRP30047 84 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 S100A11P31949 105 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 NMUP48645 174 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 BCAP31P51572 246 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 RPL23P62829 140 aaKnown RBP-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 RHEBQ15382 184 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 TMEM128Q5BJH2 165 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 SPINT4Q6UDR6 99 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 SFTA2Q6UW10 78 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 Q6ZQY7 126 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 COMMD7Q86VX2 200 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 SPATA24Q86W54 205 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 Q8N9L7 120 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 SPANXA2-OT1Q8N9U9 137 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 OR5H6Q8NGV6 325 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 TMEM254Q8TBM7 123 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 HIST1H2BAQ96A08 127 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 MRPL34Q9BQ48 92 aaKnown RBP-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 NAA38Q9BRA0 125 aaKnown RBP-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 MIEN1Q9BRT3 115 aa-0.15□□□□□ -2.43
RNU6-42P-201ENST00000384165 SNHG12Q9BXW3 62 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms